Cite this strain

Parvimonas micra (CCUG 48626 A)

Name: Parvimonas micra (CCUG 48626 A)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 153171

Type strain

Culture col. no. CCUG 48626 A

NCBI tax ID(s) 33033

Special Collections CCUG

Parvimonas micra CCUG 48626 A is an anaerobe, mesophilic prokaryote that was isolated from Human pleural fluid,empyema,64-yr-old man.

anaerobe mesophilic

Name and taxonomic classification

Culture Collection Numbers

CCUG 48626 A

@ref 20215

Last LPSN update 2025-12-16 10:06:45

Domain Bacillati

Phylum Bacillota

Class Clostridia

Order Tissierellales

Family Peptoniphilaceae

Genus Parvimonas

Species Parvimonas micra

Full scientific name Parvimonas micra (Prévot 1933) Tindall and Euzéby 2006

Synonyms (6)

Micromonas micra
"Streptococcus micros"
Peptostreptococcus micros
Micromonas micros
Peptococcus glycinophilus
"Diplococcus glycinophilus"

BacDive ID	Other strains from **Parvimonas micra** (9)	Type strain
18066	P. micra 3024A, 3119B, DSM 20468, ATCC 33270, CCUG ... (type strain)
137491	P. micra CIP 60.5
147598	P. micra CCUG 33859
151653	P. micra CCUG 44542 B
153996	P. micra CCUG 51889
155221	P. micra CCUG 56953
155242	P. micra CCUG 57049
155852	P. micra CCUG 59473
156358	P. micra CCUG 61280

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
58265	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

58265

Oxygen toleranceanaerobe

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	coenzyme A metabolism	100	4 of 4
66794	folate polyglutamylation	100	1 of 1
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	palmitate biosynthesis	95.45	21 of 22
66794	aspartate and asparagine metabolism	88.89	8 of 9
66794	peptidoglycan biosynthesis	80	12 of 15
66794	lipoate biosynthesis	80	4 of 5
66794	photosynthesis	78.57	11 of 14
66794	ppGpp biosynthesis	75	3 of 4
66794	acetate fermentation	75	3 of 4
66794	reductive acetyl coenzyme A pathway	71.43	5 of 7
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	octane oxidation	66.67	2 of 3
66794	molybdenum cofactor biosynthesis	66.67	6 of 9
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	formaldehyde oxidation	66.67	2 of 3
66794	selenocysteine biosynthesis	66.67	4 of 6
66794	acetoin degradation	66.67	2 of 3
66794	purine metabolism	64.89	61 of 94
66794	pyrimidine metabolism	64.44	29 of 45
66794	C4 and CAM-carbon fixation	62.5	5 of 8
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
66794	glutamate and glutamine metabolism	60.71	17 of 28
66794	glycine betaine biosynthesis	60	3 of 5
66794	hydrogen production	60	3 of 5
66794	glycolysis	58.82	10 of 17
66794	methionine metabolism	57.69	15 of 26
66794	propanol degradation	57.14	4 of 7
66794	degradation of sugar alcohols	56.25	9 of 16
66794	cysteine metabolism	55.56	10 of 18
66794	serine metabolism	55.56	5 of 9
66794	urea cycle	53.85	7 of 13
66794	oxidative phosphorylation	51.65	47 of 91
66794	aminopropanol phosphate biosynthesis	50	1 of 2
66794	cis-vaccenate biosynthesis	50	1 of 2
66794	ethanol fermentation	50	1 of 2
66794	butanoate fermentation	50	2 of 4
66794	NAD metabolism	50	9 of 18
66794	adipate degradation	50	1 of 2
66794	gluconeogenesis	50	4 of 8
66794	isoprenoid biosynthesis	46.15	12 of 26
66794	phenylalanine metabolism	46.15	6 of 13
66794	pentose phosphate pathway	45.45	5 of 11
66794	CO2 fixation in Crenarchaeota	44.44	4 of 9
66794	d-mannose degradation	44.44	4 of 9
66794	ubiquinone biosynthesis	42.86	3 of 7
66794	non-pathway related	42.11	16 of 38
66794	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
66794	alanine metabolism	41.38	12 of 29
66794	methylglyoxal degradation	40	2 of 5
66794	glycine metabolism	40	4 of 10
66794	myo-inositol biosynthesis	40	4 of 10
66794	phenylpropanoid biosynthesis	38.46	5 of 13
66794	vitamin B1 metabolism	38.46	5 of 13
66794	leucine metabolism	38.46	5 of 13
66794	ketogluconate metabolism	37.5	3 of 8
66794	tryptophan metabolism	36.84	14 of 38
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	enterobactin biosynthesis	33.33	1 of 3
66794	IAA biosynthesis	33.33	1 of 3
66794	valine metabolism	33.33	3 of 9
66794	arginine metabolism	33.33	8 of 24
66794	lipid metabolism	32.26	10 of 31
66794	histidine metabolism	31.03	9 of 29
66794	sulfate reduction	30.77	4 of 13
66794	threonine metabolism	30	3 of 10
66794	glutathione metabolism	28.57	4 of 14
66794	tetrahydrofolate metabolism	28.57	4 of 14
66794	aclacinomycin biosynthesis	28.57	2 of 7
66794	degradation of hexoses	27.78	5 of 18
66794	metabolism of disaccharids	27.27	3 of 11
66794	flavin biosynthesis	26.67	4 of 15
66794	lysine metabolism	26.19	11 of 42
66794	vitamin E metabolism	25	1 of 4
66794	degradation of pentoses	25	7 of 28
66794	isoleucine metabolism	25	2 of 8
66794	biotin biosynthesis	25	1 of 4
66794	cyclohexanol degradation	25	1 of 4
66794	glycogen biosynthesis	25	1 of 4
66794	lactate fermentation	25	1 of 4
66794	dTDPLrhamnose biosynthesis	25	2 of 8
66794	ascorbate metabolism	22.73	5 of 22
66794	4-hydroxymandelate degradation	22.22	2 of 9
66794	lipid A biosynthesis	22.22	2 of 9
66794	nitrate assimilation	22.22	2 of 9
66794	tyrosine metabolism	21.43	3 of 14
66794	citric acid cycle	21.43	3 of 14

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	#Male
#Host Body Product	#Oral cavity and Airways	#Pleural fluid
#Host Body-Site	#Oral cavity and airways	#Lung
#Infection	#Patient	-

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
58265	Human pleural fluid,empyema,64-yr-old man	2004-01-04	Göteborg	Sweden	SWE	Europe

Interaction and safety

Sequence information

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Identification of clinically important anaerobic bacteria by an oligonucleotide array.	Lin YT, Vaneechoutte M, Huang AH, Teng LJ, Chen HM, Su SL, Chang TC.	J Clin Microbiol	10.1128/jcm.01620-09	2010

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#58265	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 48626 A
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

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Parvimonas micra (CCUG 48626 A)

Name and taxonomic classification

Culture Collection Numbers

Morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Oxygen tolerance

Pathway annotation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

Genome-based predictions

Literature

Literature

References

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