Brachymonas denitrificans (CCUG 45880)

Name: Brachymonas denitrificans (CCUG 45880)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 152138

Type strain

Culture col. no. CCUG 45880

NCBI tax ID(s) 28220

Special Collections CCUG

Links

Brachymonas denitrificans CCUG 45880 is an aerobe bacterium that was isolated from Wastewater,tannery.

aerobe Bacteria

Name and taxonomic classification

SI-ID 110513

CCUG 45880

@ref 20215

Last LPSN update 2026-05-29 08:42:31

Domain Bacteria

Phylum Pseudomonadota

Class Betaproteobacteria

Order Burkholderiales

Family Comamonadaceae

Genus Brachymonas

Species Brachymonas denitrificans

Full scientific name Brachymonas denitrificans Hiraishi et al. 1995

Synonyms (1)

Allobrachymonas denitrificans

BacDive ID	Other strains from **Brachymonas denitrificans** (8)	Type strain
2908	B. denitrificans AS-P1, DSM 15123, JCM 9216, CCUG 45365, CGMCC ... (type strain)
152139	B. denitrificans CCUG 45881
152140	B. denitrificans CCUG 45882
152141	B. denitrificans CCUG 45883
152142	B. denitrificans CCUG 45884
152143	B. denitrificans CCUG 45885
166019	B. denitrificans JCM 9217
166020	B. denitrificans JCM 9218

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
56964	positive	growth	30

Physiology and metabolism

Oxygen tolerance

56964

Oxygen toleranceaerobe

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	+	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	-	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	+	reduction	from API 20NE
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68382	cystine arylamidase	-	3.4.11.3	from API zym
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	+		from API zym
68369	gelatinase	-		from API 20NE
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
68382	trypsin	-	3.4.21.4	from API zym
68369	urease	-	3.5.1.5	from API 20NE
68382	valine arylamidase	-		from API zym

Fatty acid profile

Metadata FA analysis

@ref

56964

Fatty acid	Percentage	ECL
C16:1 ω7c	37.3	15.819
C16:0	31.6	16
C12:0	10.4	12
C18:1 ω7c /12t/9t	6.3	17.824
C12:0 3OH	2.9	13.455
C18:2 ω6,9c/C18:0 ANTE	2.5	17.724
C10:0 3OH	1.4	11.423
C16:0 2OH	1	17.233
C18:0	1	18
C17:0	1	17
C19:0 CYCLO ω9c	0.7	18.87
C15:0	0.7	15
C14:0	0.7	14
C17:1 ω6c	0.6	16.862
C18:1 ω9c	0.6	17.769
C10:0	0.5	10
Unidentified	0.5	9.988
C16:0 3OH	0.4	17.52

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
56964	-	+	-	+	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
56964	+	-	+	-	-	-	-	-	+	-	-	-	-	-	-	+	-	+	-	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Industrial	#Plant (Factory)
#Engineered	#Waste	#Wastewater

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
56964	Wastewater,tannery	Modjo and Ethio tanneries	Ethiopia	ETH	Africa

Interaction and safety

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#56964	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 45880
#68369	Automatically annotated from API 20NE .
#68382	Automatically annotated from API zym .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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