Name: Jeotgalibacillus salarius ASL-1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 1513

Type strain:

Species: Jeotgalibacillus salarius

Strain Designation: ASL-1

Culture col. no.: DSM 23492, CCUG 56751, KCTC 13257, ASL -1

Strain history: <- JH Yoon, KRIBB

NCBI tax ID(s): 546023 (species)

SI-ID 396888

DSM 23492, CCUG 56751

Section

Jeotgalibacillus salarius ASL-1 is an aerobe, spore-forming, mesophilic bacterium that was isolated from Sediment, marine saltern.

Gram-variable
motile
rod-shaped
spore-forming
aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Caryophanaceae*
	Genus	*Jeotgalibacillus*
	Species	**Jeotgalibacillus salarius**
	Full Scientific Name (LPSN)	Jeotgalibacillus salarius Yoon et al. 2010

Information on morphological and physiological properties Morphology

[Ref.: #29194]	Gram stain	variable
[Ref.: #67771]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #29194]	Cell length	4.9 µm

[Ref.: #29194]	Cell width	0.55 µm

[Ref.: #29194]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #29194]	Motility	yes
[Ref.: #67771]	Motility	yes
[Ref.: #69480]	Motility	yes Confidence in %96.538

[Ref.: #67771]	Flagellum arrangement	peritrichous

[Ref.: #61073]

Incubation period

1 day

[Ref.: #29194]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #17179]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #17179]

Culture medium growth

[Ref.: #17179]

Culture medium link

Medium recipe at MediaDive

[Ref.: #17179]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #17179]	growth	30 °C
[Ref.: #29194]	growth	04-40 °C
[Ref.: #29194]	optimum	30 °C
[Ref.: #61073]	growth	30 °C
[Ref.: #67771]	growth	30 °C

[Ref.: #17179]	Temperature range	mesophilic
[Ref.: #29194]	Temperature range	mesophilic
[Ref.: #61073]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #29194]			optimum	7.5
[Ref.: #29194]			growth	06-08

Information on physiology and metabolism Physiology and metabolism

[Ref.: #29194]	Oxygen tolerance	aerobe
[Ref.: #61073]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #67771]	Type of spore	endospore
[Ref.: #67771]	Ability of spore formation	yes
[Ref.: #29194]	Ability of spore formation	yes
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %99.221

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #29194]		NaCl		growth	0-18	%
[Ref.: #29194]		NaCl		optimum	2	%

[Ref.: #67771]

Observation

quinones: MK-8

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29194]	cellobiose ChEBI	+	carbon source
[Ref.: #29194]	esculin ChEBI	+	hydrolysis
[Ref.: #29194]	fructose ChEBI	+	carbon source
[Ref.: #29194]	galactose ChEBI	+	carbon source
[Ref.: #29194]	glucose ChEBI	+	carbon source
[Ref.: #29194]	maltose ChEBI	+	carbon source
[Ref.: #29194]	mannitol ChEBI	+	carbon source
[Ref.: #29194]	ribose ChEBI	+	carbon source
[Ref.: #29194]	sucrose ChEBI	+	carbon source
[Ref.: #29194]	trehalose ChEBI	+	carbon source

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #29194]		catalase	+	1.11.1.6
[Ref.: #29194]		cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #17179]	Sample type/isolated from	Sediment, marine saltern
[Ref.: #17179]	Geographic location (country and/or sea, region)	Coast of the Yellow Sea
[Ref.: #17179]	Country	Republic of Korea
[Ref.: #17179]	Country ISO 3 Code	KOR
[Ref.: #17179]	Continent	Asia

[Ref.: #61073]	Sample type/isolated from	Marine solar saltern sediment
[Ref.: #61073]	Sampling date	2006
[Ref.: #61073]	Geographic location (country and/or sea, region)	Yellow Sea
[Ref.: #61073]	Country	Republic of Korea
[Ref.: #61073]	Country ISO 3 Code	KOR
[Ref.: #61073]	Continent	Asia

[Ref.: #67771]	Sample type/isolated from	From salten field
[Ref.: #67771]	Country	Republic of Korea
[Ref.: #67771]	Country ISO 3 Code	KOR
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment
#Condition	#Saline	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence EU874389 (>99% sequence identity) for Jeotgalibacillus from Microbeatlas

Aquatic Samples	15
Soil Samples	4
Animal Samples	1
Plant Samples	2
Total Samples	22

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #17179]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #17179]	Jeotgalibacillus salarius strain ASL-1 16S ribosomal RNA gene, partial sequence	EU874389	1507	ENA	546023 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Jeotgalibacillus salarius ASL-1	GCA_004405125	scaffold	GenBank	546023 tax ID	*
[Ref.: #66792]	Jeotgalibacillus salarius ASL-1	2891177262	draft	JGI IMG/M	546023 tax ID	*

[Ref.: #17179]

GC-content

42.9 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Jeotgalibacillus salarius ASL-1 NCBI: GCA_004405125.1
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Jeotgalibacillus salarius ASL-1 NCBI: GCA_004405125.1
[Ref.: #69480]	motile	yes	92.286	yes
[Ref.: #69480]	flagellated	yes	90.128	yes
[Ref.: #69480]	gram-positive	yes	91.392	no
[Ref.: #69480]	anaerobic	no	98.456	no
[Ref.: #69480]	aerobic	yes	95.092	no
[Ref.: #69480]	halophile	yes	79.192	no
[Ref.: #69480]	spore-forming	yes	92.918	no
[Ref.: #69480]	glucose-util	yes	91.005	yes
[Ref.: #69480]	thermophile	no	98.281	yes
[Ref.: #69480]	glucose-ferment	no	91.667	no

Availability in culture collections External links

[Ref.: #17179]

Culture collection no.

DSM 23492, CCUG 56751, KCTC 13257, ASL -1

[Ref.: #71159]

SI-ID 396888

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Description of Jeotgalibacillus alkaliphilus sp. nov., isolated from a solar salt pan, and Jeotgalibacillus terrae sp. nov., a name to replace 'Jeotgalibacillus soli' Chen et al. 2010.	Srinivas A, Divyasree B, Sasikala C, Tushar L, Bharti D, Ramana CV	Int J Syst Evol Microbiol	10.1099/ijsem.0.001491	2016	*
Phylogeny	Jeotgalibacillus salarius sp. nov., isolated from a marine saltern, and reclassification of Marinibacillus marinus and Marinibacillus campisalis as Jeotgalibacillus marinus comb. nov. and Jeotgalibacillus campisalis comb. nov., respectively.	Yoon JH, Kang SJ, Schumann P, Oh TK	Int J Syst Evol Microbiol	10.1099/ijs.0.008318-0	2009	*

References

#17179

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23492

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#29194

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25617 (see below)

#61073 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 56751

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#71159

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID396888.1 )

#25617

IJSEM 15 2010 ( DOI 10.1099/ijs.0.008318-0 , PubMed 19643870 )

* These data were automatically processed and therefore are not curated

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