Name: Virgibacillus proomii BO413
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 1480

Type strain:

Species: Virgibacillus proomii

Strain Designation: BO413, F 2737/77, F2737/77, B0413

Culture col. no.: DSM 13055, LMG 12370, CIP 106304

Strain history: CIP <- 1999, N.A. Logan, Glasgow Caledonian Univ., UK: strain B0413 <- PHLS, Colindale, London, UK: strain F2737/77

NCBI tax ID(s): 84407 (species)

SI-ID 7106

LMG 12370, DSM 13055, NCIMB 13609, KCTC 3822, CCM 4849, KCTC 3861, CIP 106304

Special Collections

Other strains from Virgibacillus proomii

Section

Virgibacillus proomii BO413 is a facultative anaerobe, spore-forming, Gram-positive bacterium that forms circular colonies and was isolated from water supply.

colony-forming
Gram-positive
motile
rod-shaped
spore-forming
facultative anaerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Bacillaceae*
	Genus	*Virgibacillus*
	Species	**Virgibacillus proomii**
	Full Scientific Name (LPSN)	Virgibacillus proomii Heyndrickx et al. 1999

Information on morphological and physiological properties Morphology

[Ref.: #23061]	Gram stain	positive
[Ref.: #121962]	Gram stain	positive

[Ref.: #23061]	Cell length	2.0-8.0 µm

[Ref.: #23061]	Cell width	0.5-0.7 µm

[Ref.: #23061]	Cell shape	rod-shaped
[Ref.: #121962]	Cell shape	rod-shaped

[Ref.: #23061]	Motility	yes
[Ref.: #121962]	Motility	yes

[Ref.: #121962]	Hemolysis ability	1

[Ref.: #23061]	Colony size	1.0-4.0 mm
[Ref.: #23061]	Colony color	creamy-grey
[Ref.: #23061]	Colony shape	circular
[Ref.: #23061]	Incubation period	2 days
[Ref.: #23061]	Cultivation medium used	trypticase soy agar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #4888]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #4888]

Culture medium growth

[Ref.: #4888]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4888]

Culture medium composition

expand / minimize

[Ref.: #23061]

Culture medium

trypticase soy agar

[Ref.: #23061]

Culture medium growth

[Ref.: #39486]

Culture medium

MEDIUM 316 - for Bacillus subtilis subsp. spizizenii

[Ref.: #39486]

Culture medium growth

[Ref.: #39486]

Culture medium composition

expand / minimize

[Ref.: #121962]

Culture medium

CIP Medium 316

[Ref.: #121962]

Culture medium growth

[Ref.: #121962]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #4888]		growth	30 °C
[Ref.: #23061]		growth	15.0-50.0 °C
[Ref.: #23061]		optimum	37.0 °C
[Ref.: #39486]		growth	30 °C
[Ref.: #121962]		growth	22-45 °C
[Ref.: #121962]	no	growth	10 °C
[Ref.: #121962]	no	growth	55 °C

	pH	Kind of pH		pH
[Ref.: #121962]			growth	6

Information on physiology and metabolism Physiology and metabolism

[Ref.: #23061]	Oxygen tolerance	facultative anaerobe
[Ref.: #121962]	Oxygen tolerance	obligate aerobe

[Ref.: #23061]	Spore description	spherical to ellipsoidal,terminal or sometimes subterminal, in swollen sporangia
[Ref.: #23061]	Type of spore	endospore
[Ref.: #23061]	Ability of spore formation	yes
[Ref.: #121962]	Ability of spore formation	yes

	Salt	Tested relation		Salt conc.
[Ref.: #121962]	NaCl		growth	2-4	%
[Ref.: #121962]	NaCl	no	growth	0	%
[Ref.: #121962]	NaCl	no	growth	6	%
[Ref.: #121962]	NaCl	no	growth	8	%
[Ref.: #121962]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #23061]	2-dehydro-D-gluconate ChEBI	-	builds acid from
[Ref.: #23061]	5-dehydro-D-gluconate ChEBI	-	builds acid from
[Ref.: #23061]	amygdalin ChEBI	-	builds acid from
[Ref.: #68371]	amygdalin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	arbutin ChEBI	-	builds gas from
[Ref.: #23061]	arbutin ChEBI	+	builds acid from
[Ref.: #68371]	arbutin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	casein	+	hydrolysis
[Ref.: #23061]	cellobiose ChEBI	-	builds acid from
[Ref.: #68371]	cellobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #121962]	citrate ChEBI	-	carbon source
[Ref.: #23061]	D-arabinose ChEBI	-	builds acid from
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	D-arabitol ChEBI	-	builds acid from
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	D-fructose ChEBI	-	builds gas from
[Ref.: #23061]	D-fructose ChEBI	+	builds acid from
[Ref.: #68371]	D-fructose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	D-fucose ChEBI	-	builds acid from
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-galactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	D-glucose ChEBI	-	builds gas from
[Ref.: #23061]	D-glucose ChEBI	+	builds acid from
[Ref.: #68371]	D-glucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	D-lyxose ChEBI	-	builds acid from
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	D-mannose ChEBI	-	builds gas from
[Ref.: #23061]	D-mannose ChEBI	+	builds acid from
[Ref.: #68371]	D-mannose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-ribose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	D-tagatose ChEBI	-	builds gas from
[Ref.: #23061]	D-tagatose ChEBI	+	builds acid from
[Ref.: #68371]	D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	D-xylose ChEBI	-	builds acid from
[Ref.: #68371]	D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	erythritol ChEBI	-	builds acid from
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	esculin ChEBI	+	hydrolysis
[Ref.: #121962]	esculin ChEBI	-	hydrolysis
[Ref.: #68371]	esculin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	galactitol ChEBI	-	builds acid from
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	galactose ChEBI	-	builds gas from
[Ref.: #23061]	galactose ChEBI	+	builds acid from
[Ref.: #23061]	gelatin ChEBI	+	hydrolysis
[Ref.: #23061]	gentiobiose ChEBI	-	builds acid from
[Ref.: #68371]	gentiobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	gluconate ChEBI	-	builds acid from
[Ref.: #68371]	gluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	glycerol ChEBI	-	builds acid from
[Ref.: #68371]	glycerol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	glycogen ChEBI	-	builds acid from
[Ref.: #68371]	glycogen ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #121962]	hippurate ChEBI	-	hydrolysis
[Ref.: #23061]	inulin ChEBI	-	builds acid from
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	L-arabinose ChEBI	-	builds acid from
[Ref.: #68371]	L-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	L-arabitol ChEBI	-	builds acid from
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	L-fucose ChEBI	-	builds acid from
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	L-sorbose ChEBI	-	builds acid from
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	L-xylose ChEBI	-	builds acid from
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	lactose ChEBI	-	builds acid from
[Ref.: #68371]	lactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	maltose ChEBI	-	builds gas from
[Ref.: #23061]	maltose ChEBI	+	builds acid from
[Ref.: #68371]	maltose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	mannitol ChEBI	-	builds acid from
[Ref.: #23061]	melezitose ChEBI	-	builds acid from
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	melibiose ChEBI	-	builds acid from
[Ref.: #68371]	melibiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	methyl alpha-D-glucopyranoside ChEBI	-	builds gas from
[Ref.: #23061]	methyl alpha-D-glucopyranoside ChEBI	+	builds acid from
[Ref.: #68371]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	methyl alpha-D-mannoside ChEBI	-	builds acid from
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	myo-inositol ChEBI	-	builds gas from
[Ref.: #23061]	myo-inositol ChEBI	+	builds acid from
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	N-acetylglucosamine ChEBI	-	builds gas from
[Ref.: #23061]	N-acetylglucosamine ChEBI	+	builds acid from
[Ref.: #68371]	N-acetylglucosamine ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	nitrate ChEBI	-	reduction
[Ref.: #121962]	nitrate ChEBI	-	reduction
[Ref.: #121962]	nitrate ChEBI	-	respiration
[Ref.: #121962]	nitrite ChEBI	-	reduction
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	raffinose ChEBI	-	builds acid from
[Ref.: #68371]	raffinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	rhamnose ChEBI	-	builds acid from
[Ref.: #23061]	ribitol ChEBI	-	builds acid from
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	ribose ChEBI	-	builds gas from
[Ref.: #23061]	ribose ChEBI	+	builds acid from
[Ref.: #23061]	salicin ChEBI	-	builds gas from
[Ref.: #23061]	salicin ChEBI	+	builds acid from
[Ref.: #68371]	salicin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	sorbitol ChEBI	-	builds acid from
[Ref.: #23061]	starch ChEBI	-	builds gas from
[Ref.: #23061]	starch ChEBI	+	builds acid from
[Ref.: #68371]	starch ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	sucrose ChEBI	-	builds gas from
[Ref.: #23061]	sucrose ChEBI	+	builds acid from
[Ref.: #68371]	sucrose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	trehalose ChEBI	-	builds gas from
[Ref.: #23061]	trehalose ChEBI	+	builds acid from
[Ref.: #68371]	trehalose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	turanose ChEBI	-	builds acid from
[Ref.: #68371]	turanose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #23061]	xylitol ChEBI	-	builds acid from
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #23061]	acetoin ChEBI	no
[Ref.: #23061]	hydrogen sulfide ChEBI	no
[Ref.: #23061]	indole ChEBI	no
[Ref.: #121962]	indole ChEBI	no

	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #23061]	acetoin ChEBI	-
[Ref.: #121962]	acetoin ChEBI	-
[Ref.: #121962]	glucose ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #121962]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #121962]	amylase	-
[Ref.: #121962]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #121962]	caseinase	+	3.4.21.50
[Ref.: #23061]	catalase	+	1.11.1.6
[Ref.: #121962]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #121962]	DNase	+
[Ref.: #68382]	esterase (C 4)	-		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #121962]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #121962]	gelatinase	+/-
[Ref.: #121962]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #121962]	lipase	+
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #121962]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #121962]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #121962]	oxidase	+
[Ref.: #121962]	protease	+
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #121962]	tryptophan deaminase	-
[Ref.: #121962]	tween esterase	+
[Ref.: #121962]	urease	+	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #121962]	10504	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #121962]	1632	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #121962]	9384	-	+	-	+	-	-	-	-	-	-	-	+	-	-	-	+	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #4888]	Sample type/isolated from	water supply
[Ref.: #4888]	Geographic location (country and/or sea, region)	Colindale
[Ref.: #4888]	Country	United Kingdom
[Ref.: #4888]	Country ISO 3 Code	GBR
[Ref.: #4888]	Continent	Europe

[Ref.: #121962]	Sample type/isolated from	Environment, Water supply
[Ref.: #121962]	Country	United Kingdom
[Ref.: #121962]	Country ISO 3 Code	GBR
[Ref.: #121962]	Continent	Europe
[Ref.: #121962]	Isolation date	1977
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ012667 (>99% sequence identity) for Virgibacillus proomii subclade from Microbeatlas

Aquatic Samples	71
Soil Samples	102
Animal Samples	197
Plant Samples	58
Total Samples	428

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #4888]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #121962]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #23061]	Virgibacillus proomii 16S rRNA gene, strain LMG 12370	AJ012667	1506	GenBank ENA	84407 tax ID
[Ref.: #20218]	Virgibacillus proomii genes for 16S ribosomal RNA, internal transcribed spacer 1 and 23S ribosomal RNA, partial and complete sequence, clone: 675	AB367188	675	GenBank ENA	84407 tax ID	*
[Ref.: #20218]	Virgibacillus proomii genes for 16S ribosomal RNA, internal transcribed spacer 1 and 23S ribosomal RNA, partial and complete sequence, clone: 495	AB367189	495	GenBank ENA	84407 tax ID	*
[Ref.: #20218]	Virgibacillus proomii isolate VP2 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	EU723673	592	GenBank ENA	84407 tax ID	*
[Ref.: #20218]	Virgibacillus proomii isolate VP3 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	EU723674	439	GenBank ENA	84407 tax ID	*
[Ref.: #20218]	Virgibacillus proomii isolate Vp26 16S ribosomal RNA gene, partial sequence; 16S-23S internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	EU723675	884	GenBank ENA	84407 tax ID	*

[Ref.: #23061]

GC-content

37.0 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #4888]

Culture collection no.

DSM 13055, LMG 12370, CIP 106304

[Ref.: #71126]

SI-ID 7106

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Proposal of Virgibacillus proomii sp. nov. and emended description of Virgibacillus pantothenticus (Proom and Knight 1950) Heyndrickx et al. 1998.	Heyndrickx M, Lebbe L, Kersters K, Hoste B, De Wachter R, De Vos P, Forsyth G, Logan NA	Int J Syst Bacteriol	10.1099/00207713-49-3-1083	1999	*

References

#4888

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 13055

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#23061

M. Heyndrickx,L. Lebbe,K. Kersters,B. Hoste,R. De Wachter,P. De Vos,G. Forsyth,N. A. Logan: Proposal of Virgibacillus proomii sp. nov. and emended description of Virgibacillus pantothenticus (Proom and Knight 1950) Heyndrickx et al. 1998. IJSEM 49: 1083 - 1090 1999 ( DOI 10.1099/00207713-49-3-1083 , PubMed 10425765 )

#39486 ; Curators of the CIP;

#68371

Automatically annotated from API 50CH acid .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#71126

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID7106.1 )

#121962 Collection of Institut Pasteur ; Curators of the CIP; CIP 106304
* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Virgibacillus proomii in external resources:
SILVA
BRENDA
PANGAEA
GBIF