Name: Lactococcus chungangensis CIP 109874
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 14709

Type strain:

Species: Lactococcus chungangensis

Culture col. no.: CIP 109874, DSM 22330, CCUG 55099, KCTC 13185, CAU 28, JCM 17100

Strain history: CCUG 55099 <-- W. Kim CAU 28.

NCBI tax ID(s): 1122154 (strain), 451457 (species)

Section

Lactococcus chungangensis CIP 109874 is a microaerophile, mesophilic, Gram-positive bacterium that was isolated from foam sample taken from an activated sludge wastewater treatment plant.

Gram-positive
ovoid-shaped
mesophilic
microaerophile
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	07-12-2022 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Streptococcaceae*
	Genus	*Lactococcus*
	Species	**Lactococcus chungangensis**
	Full Scientific Name (PNU)	Lactococcus chungangensis Cho et al. 2008

Information on morphological and physiological properties Morphology

[Ref.: #32461]	Gram stain	positive
[Ref.: #32461]	Cell shape	ovoid-shaped
[Ref.: #32461]	Motility	no

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	no Confidence in %92.087

[Ref.: #60460]

Incubation period

2 days

[Ref.: #32461]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16286]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #16286]

Culture medium growth

[Ref.: #16286]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #16286]

Culture medium composition

expand / minimize

[Ref.: #33940]

Culture medium

MEDIUM 10 - Chocolate medium for Actinobacillus pleuropneumoniae, Capnocytophaga cynodegmi, Haemophilus and Neisseria

[Ref.: #33940]

Culture medium growth

[Ref.: #33940]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #16286]	growth	30 °C
[Ref.: #32461]	growth	04-30 °C
[Ref.: #32461]	optimum	30 °C
[Ref.: #33940]	growth	37 °C
[Ref.: #60460]	growth	30-37 °C
[Ref.: #67770]	growth	30 °C

[Ref.: #16286]	Temperature range	mesophilic
[Ref.: #32461]	Temperature range	mesophilic
[Ref.: #33940]	Temperature range	mesophilic
[Ref.: #60460]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #32461]			optimum	7
[Ref.: #32461]			growth	7

Information on physiology and metabolism Physiology and metabolism

[Ref.: #16286]	Oxygen tolerance	microaerophile
[Ref.: #32461]	Oxygen tolerance	facultative anaerobe

[Ref.: #32461]	Ability of spore formation	no
[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.99

[Ref.: #32461]

Observation

aggregates in chains

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68381]	alpha-cyclodextrin ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	arginine ChEBI	-	hydrolysis	* from API rID32STR
[Ref.: #68381]	D-arabitol ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	D-mannitol ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	D-ribose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	D-tagatose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #32461]	esculin ChEBI	+	hydrolysis
[Ref.: #32461]	fructose ChEBI	+	carbon source
[Ref.: #32461]	glucose ChEBI	+	carbon source
[Ref.: #68381]	glycogen ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	hippurate ChEBI	-	hydrolysis	* from API rID32STR
[Ref.: #68381]	L-arabinose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	lactose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #32461]	maltose ChEBI	+	carbon source
[Ref.: #68381]	maltose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #32461]	mannitol ChEBI	+	carbon source
[Ref.: #32461]	mannose ChEBI	+	carbon source
[Ref.: #68381]	melezitose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	melibiose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	methyl beta-D-glucopyranoside ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #32461]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #68381]	pullulan ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	raffinose ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #68381]	sorbitol ChEBI	-	builds acid from	* from API rID32STR
[Ref.: #32461]	sucrose ChEBI	+	carbon source
[Ref.: #68381]	sucrose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	trehalose ChEBI	+	builds acid from	* from API rID32STR
[Ref.: #68381]	urea ChEBI	-	hydrolysis	* from API rID32STR
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite
[Ref.: #68381]		acetoin ChEBI	* from API rID32STR

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #68381]		acetoin ChEBI	+	* from API rID32STR

	Enzyme	Enzyme activity	EC number
[Ref.: #68381]	Alanyl-Phenylalanyl-Proline arylamidase	+		* from API rID32STR
[Ref.: #68381]	alkaline phosphatase	-	3.1.3.1	* from API rID32STR
[Ref.: #68381]	alpha-galactosidase	-	3.2.1.22	* from API rID32STR
[Ref.: #68381]	arginine dihydrolase	-	3.5.3.6	* from API rID32STR
[Ref.: #68381]	beta-galactosidase	-	3.2.1.23	* from API rID32STR
[Ref.: #68381]	beta-glucosidase	+	3.2.1.21	* from API rID32STR
[Ref.: #68381]	beta-glucuronidase	-	3.2.1.31	* from API rID32STR
[Ref.: #68381]	beta-mannosidase	+	3.2.1.25	* from API rID32STR
[Ref.: #68381]	glycyl tryptophan arylamidase	-		* from API rID32STR
[Ref.: #68381]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API rID32STR
[Ref.: #68381]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API rID32STR
[Ref.: #68381]	urease	-	3.5.1.5	* from API rID32STR
	Only first 10 entries are displayed. Click here to see all.

API® rID32STR:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Arginine dihydrolaseADH (Arg)	beta-Glucosidasebeta GLU	beta-Galactosidasebeta GAR	beta-Glucuronidasebeta GUR	alpha-Galactosidasealpha GAL	Alkaline PhosphatasePAL	Acid from D-riboseRIB	Acid from D-mannitolMAN	Acid from sorbitolSOR	Acid from lactoseLAC	Acid from trehaloseTRE	Acid from raffinoseRAF	Acid from sucroseSAC	Acid from L-arabinoseLARA	Acid from D-arabitolDARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta-Galactosidasebeta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	Hydrolysis of hippuric acidHIP	Acid from glycogenGLYG	Acid from pullulanPUL	Acid from maltoseMAL	Acid from melibioseMEL	Acid from melezitoseMLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	Acid from D-tagatoseTAG	beta-Mannosidasebeta MAN	Urease/urea hydrolysisURE
[Ref.: #16286]	9956	-	+	-	-	-	-	-	+	-	-	+	-	+	-	-	+	+	+	-	-	-	-	-	-	-	+	-	-	-	-	+	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16286]	Sample type/isolated from	foam sample taken from an activated sludge wastewater treatment plant
[Ref.: #16286]	Geographic location (country and/or sea, region)	Cheonan
[Ref.: #16286]	Country	Republic of Korea
[Ref.: #16286]	Country ISO 3 Code	KOR
[Ref.: #16286]	Continent	Asia

[Ref.: #60460]	Sample type/isolated from	Wastewater,activated sludge (screening)
[Ref.: #60460]	Sampling date	2006-10-18
[Ref.: #60460]	Geographic location (country and/or sea, region)	Cheonan
[Ref.: #60460]	Country	Republic of Korea
[Ref.: #60460]	Country ISO 3 Code	KOR
[Ref.: #60460]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Activated sludge foam
[Ref.: #67770]	Geographic location (country and/or sea, region)	Cheonan
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Engineered	#Waste	#Activated sludge
#Engineered	#Waste	#Water treatment plant
#Environmental	#Aquatic	#Foam

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence LC519863 (>99% sequence identity) for Lactococcus chungangensis from Microbeatlas

Aquatic Samples	3162
Soil Samples	199
Animal Samples	1011
Plant Samples	106
Total Samples	4478

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #16286]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16286]	Lactococcus chungangensis strain CAU 28 16S ribosomal RNA gene, partial sequence	EF694028	1463	ENA	451457 tax ID
[Ref.: #67770]	Lactococcus chungangensis JCM 17100 gene for 16S rRNA, partial sequence	LC519863	1498	ENA	451457 tax ID
[Ref.: #20218]	Lactococcus chungangensis strain KCTC 13185 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence	HM241917	618	ENA	1122154 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Lactococcus chungangensis CAU 28 = DSM 22330 DSM 22330	GCA_900119835	scaffold	GenBank	1122154 tax ID
[Ref.: #67770]	Lactococcus chungangensis CAU 28 = DSM 22330 DSM 22330	GCA_002441885	scaffold	GenBank	1122154 tax ID
[Ref.: #66792]	Lactococcus chungangensis CAU 28 = DSM 22330	1122154.4	wgs	PATRIC	1122154 tax ID	*
[Ref.: #66792]	Lactococcus chungangensis CAU 28 = DSM 22330	1122154.9	wgs	PATRIC	1122154 tax ID	*
[Ref.: #66792]	Lactococcus chungangensis CAU 28 = DSM 22330	1122154.8	wgs	PATRIC	1122154 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Lactococcus chungangensis CAU 28 = DSM 22330 DSM 22330 NCBI: GCA_002441885.1
[Ref.: #69480]	gram-positive	yes	100	yes
[Ref.: #69480]	anaerobic	no	96.554	yes
[Ref.: #69480]	spore-forming	no	99.99	yes
[Ref.: #69480]	thermophile	no	99.987	yes
[Ref.: #69480]	motile	no	92.087	yes

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Lactococcus chungangensis CAU 28 = DSM 22330 DSM 22330 NCBI: GCA_002441885.1
[Ref.: #69481]	spore-forming	no	100	no

Availability in culture collections External links

[Ref.: #16286]

Culture collection no.

CIP 109874, DSM 22330, CCUG 55099, KCTC 13185, CAU 28, JCM 17100

[Ref.: #20218]

Associated Passport(s) in StrainInfo

902088, 833383, 833384

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Lactococcus chungangensis CAU 28 alleviates diet-induced obesity and adipose tissue metabolism in vitro and in mice fed a high-fat diet.	Zhang Q, Kim JH, Kim Y, Kim W	J Dairy Sci	10.3168/jds.2020-18681	2020	*
Metabolism	Cream Cheese-Derived Lactococcus chungangensis CAU 28 Modulates the Gut Microbiota and Alleviates Atopic Dermatitis in BALB/c Mice.	Kim JH, Kim K, Kim W	Sci Rep	10.1038/s41598-018-36864-5	2019	*
Enzymology	Protective effects of Lactococcus chungangensis CAU 28 on alcohol-metabolizing enzyme activity in rats.	Konkit M, Kim K, Kim JH, Kim W	J Dairy Sci	10.3168/jds.2017-13992	2018	*
Metabolism	Oral administration of Lactococcus chungangensis inhibits 2,4-dinitrochlorobenzene-induced atopic-like dermatitis in NC/Nga mice.	Choi WJ, Konkit M, Kim Y, Kim MK, Kim W	J Dairy Sci	10.3168/jds.2016-11301	2016	*
Enzymology	Activities of amylase, proteinase, and lipase enzymes from Lactococcus chungangensis and its application in dairy products.	Konkit M, Kim W	J Dairy Sci	10.3168/jds.2016-11002	2016	*
Metabolism	Aldehyde dehydrogenase activity in Lactococcus chungangensis: Application in cream cheese to reduce aldehyde in alcohol metabolism.	Konkit M, Choi WJ, Kim W	J Dairy Sci	10.3168/jds.2015-10549	2015	*
Enzymology	Alcohol dehydrogenase activity in Lactococcus chungangensis: application in cream cheese to moderate alcohol uptake.	Konkit M, Choi WJ, Kim W	J Dairy Sci	10.3168/jds.2015-9697	2015	*
Phylogeny	Lactococcus chungangensis sp. nov., a lactic acid bacterium isolated from activated sludge foam.	Cho SL, Nam SW, Yoon JH, Lee JS, Sukhoom A, Kim W	Int J Syst Evol Microbiol	10.1099/ijs.0.65527-0	2008	*
	Author Correction: Cream Cheese-Derived Lactococcus chungangensis CAU 28 Modulates the Gut Microbiota and Alleviates Atopic Dermatitis in BALB/c Mice.	Kim JH, Kim K, Kim W	Sci Rep	10.1038/s41598-019-42748-z	2019	*

References

#16286

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22330

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#32461

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28683 (see below)

#33940 ; Curators of the CIP;
#60460 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 55099

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68381

Automatically annotated from API rID32STR .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#28683

IJSEM 1844 2008 ( DOI 10.1099/ijs.0.65527-0 , PubMed 18676466 )

* These data were automatically processed and therefore are not curated

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Lactococcus chungangensis CAU 28 = DSM 22330 DSM 22330

Lactococcus chungangensis CAU 28 = DSM 22330 DSM 22330

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