Name: Staphylococcus xylosus LRA 1641 575
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 14598

Type strain:

Species: Staphylococcus xylosus

Strain Designation: LRA 1641 575, LRA 164 15 75

Culture col. no.: DSM 6179, ATCC 35663, CCUG 35177, NCIMB 13636, CIP 103720

Strain history: CIP <- 1993, R. Mercier, bioMérieux, La Balme les Grottes, France: strain LRA 164 15 75 <- 1978, Delamas, Brest Technol. Univ., Brest, France

NCBI tax ID(s): 1288 (species)

SI-ID 41215

ATCC 35663, CCUG 35177, CIP 103720, DSM 6179, NCIMB 13636, BCRC 15250, CCRC 15250

Special Collections

Other strains from Staphylococcus xylosus

Section

Staphylococcus xylosus LRA 1641 575 is a facultative anaerobe, Gram-positive, coccus-shaped human pathogen of the family Staphylococcaceae.

coccus-shaped
Gram-positive
facultative anaerobe
human pathogen
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Staphylococcaceae*
	Genus	*Staphylococcus*
	Species	**Staphylococcus xylosus**
	Full Scientific Name (LPSN)	Staphylococcus xylosus Schleifer and Kloos 1975 (Approved Lists 1980)

Information on morphological and physiological properties Morphology

[Ref.: #124004]	Gram stain	positive

[Ref.: #124004]	Cell shape	coccus-shaped

[Ref.: #124004]	Motility	no

[Ref.: #124004]

Hemolysis ability

Information on culture and growth conditions Culture and growth conditions

[Ref.: #2511]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #2511]

Culture medium growth

[Ref.: #2511]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2511]

Culture medium composition

expand / minimize

[Ref.: #41139]

Culture medium

MEDIUM 3 - Columbia agar

[Ref.: #41139]

Culture medium growth

[Ref.: #41139]

Culture medium composition

expand / minimize

[Ref.: #124004]

Culture medium

CIP Medium 72

[Ref.: #124004]

Culture medium growth

[Ref.: #124004]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #124004]

Culture medium

CIP Medium 3

[Ref.: #124004]

Culture medium growth

[Ref.: #124004]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #2511]	growth	37 °C
[Ref.: #41139]	growth	37 °C
[Ref.: #124004]	growth	15-45 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #124004]

Oxygen tolerance

facultative anaerobe

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68375]	arabinose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68378]	arginine ChEBI	+	hydrolysis	* from API STA
[Ref.: #68375]	arginine ChEBI	-	hydrolysis	* from API ID32STA
[Ref.: #68375]	cellobiose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68378]	D-fructose ChEBI	+	builds acid from	* from API STA
[Ref.: #68375]	D-fructose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68379]	D-glucose ChEBI	+	fermentation	* from API Coryne, API ID32STA
[Ref.: #68378]	D-glucose ChEBI	-	builds acid from	* from API STA
[Ref.: #68378]	D-mannitol ChEBI	+	builds acid from	* from API STA
[Ref.: #68379]	D-mannitol ChEBI	-	fermentation	* from API Coryne, API ID32STA
[Ref.: #68378]	D-mannose ChEBI	+	builds acid from	* from API STA
[Ref.: #68375]	D-mannose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68379]	D-ribose ChEBI	+	fermentation	* from API Coryne
[Ref.: #68375]	D-ribose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68379]	D-xylose ChEBI	+	fermentation	* from API Coryne
[Ref.: #68378]	D-xylose ChEBI	-	builds acid from	* from API STA
[Ref.: #68379]	esculin ChEBI	+	hydrolysis	* from API Coryne
[Ref.: #68375]	esculin ChEBI	-	hydrolysis	* from API ID32STA
[Ref.: #68379]	gelatin ChEBI	-	hydrolysis	* from API Coryne
[Ref.: #68379]	glycogen ChEBI	-	fermentation	* from API Coryne
[Ref.: #68378]	lactose ChEBI	+	builds acid from	* from API STA
[Ref.: #68379]	lactose ChEBI	+	fermentation	* from API Coryne, API ID32STA
[Ref.: #68378]	maltose ChEBI	+	builds acid from	* from API STA
[Ref.: #68379]	maltose ChEBI	+	fermentation	* from API Coryne, API ID32STA
[Ref.: #68378]	melibiose ChEBI	-	builds acid from	* from API STA
[Ref.: #68378]	methyl alpha-D-glucopyranoside ChEBI	+	builds acid from	* from API STA
[Ref.: #68375]	N-acetylglucosamine ChEBI	+	fermentation	* from API ID32STA
[Ref.: #68378]	N-acetylglucosamine ChEBI	-	builds acid from	* from API STA
[Ref.: #124004]	nitrate ChEBI	-	reduction
[Ref.: #68379]	nitrate ChEBI	+	reduction	* from API Coryne, API ID32STA
[Ref.: #68378]	nitrate ChEBI	-	reduction	* from API STA
[Ref.: #124004]	nitrite ChEBI	-	reduction
[Ref.: #68375]	ornithine ChEBI	-	degradation	* from API ID32STA
[Ref.: #68378]	raffinose ChEBI	+	builds acid from	* from API STA
[Ref.: #68375]	raffinose ChEBI	-	fermentation	* from API ID32STA
[Ref.: #68378]	sucrose ChEBI	+	builds acid from	* from API STA
[Ref.: #68379]	sucrose ChEBI	+	fermentation	* from API Coryne, API ID32STA
[Ref.: #68378]	trehalose ChEBI	+	builds acid from	* from API STA
[Ref.: #68375]	trehalose ChEBI	+	fermentation	* from API ID32STA
[Ref.: #124004]	tributyrin ChEBI	-	hydrolysis
[Ref.: #68379]	urea ChEBI	+	hydrolysis	* from API Coryne, API ID32STA
[Ref.: #68378]	urea ChEBI	-	hydrolysis	* from API STA
[Ref.: #68378]	xylitol ChEBI	-	builds acid from	* from API STA
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Antibiotic resistance	Concentration
[Ref.: #124004]	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	yes	no
[Ref.: #68378]	lysostaphin		yes			* from API STA
[Ref.: #68375]	novobiocin ChEBI		yes	1.8	µg	* from API ID32STA

	Metabolite production	Metabolite	Production
[Ref.: #124004]		indole ChEBI	no
[Ref.: #68378]		acetoin ChEBI	yes	* from API STA, API ID32STA

	Physiological tests	Metabolite	Voges-Proskauer-test
[Ref.: #124004]		acetoin ChEBI	-
[Ref.: #68378]		acetoin ChEBI	+	* from API STA, API ID32STA

	Enzyme	Enzyme activity	EC number
[Ref.: #124004]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68378]	alkaline phosphatase	+	3.1.3.1	* from API STA, API ID32STA, API Coryne
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68379]	alpha-glucosidase	+	3.2.1.20	* from API Coryne
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68378]	arginine dihydrolase	+	3.5.3.6	* from API STA
[Ref.: #68375]	arginine dihydrolase	-	3.5.3.6	* from API ID32STA
[Ref.: #124004]	beta-galactosidase	+	3.2.1.23
[Ref.: #68375]	beta-galactosidase	+	3.2.1.23	* from API ID32STA, API Coryne
[Ref.: #68379]	beta-glucosidase	+	3.2.1.21	* from API Coryne
[Ref.: #68375]	beta-glucosidase	-	3.2.1.21	* from API ID32STA, API zym
[Ref.: #68375]	beta-glucuronidase	+	3.2.1.31	* from API ID32STA, API Coryne
[Ref.: #124004]	catalase	+	1.11.1.6
[Ref.: #68379]	catalase	+	1.11.1.6	* from API Coryne
[Ref.: #124004]	coagulase	-
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #124004]	DNase	-
[Ref.: #124004]	gelatinase	-
[Ref.: #68379]	gelatinase	-		* from API Coryne
[Ref.: #68375]	L-arginine arylamidase	-		* from API ID32STA
[Ref.: #124004]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #124004]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68379]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API Coryne, API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	-		* from API zym
[Ref.: #124004]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #68375]	ornithine decarboxylase	-	4.1.1.17	* from API ID32STA
[Ref.: #124004]	oxidase	-
[Ref.: #68379]	pyrazinamidase	-	3.5.1.B15	* from API Coryne
[Ref.: #68379]	pyrrolidonyl arylamidase	+	3.4.19.3	* from API Coryne
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #124004]	urease	+	3.5.1.5
[Ref.: #68375]	urease	+	3.5.1.5	* from API ID32STA, API Coryne
[Ref.: #68378]	urease	-	3.5.1.5	* from API STA
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #52571]

Fatty acid	Percentage	ECL
C15:0 ANTEISO	58.5	14.711
C15:0 ISO	14.7	14.621
C17:0 anteiso	8.9	16.722
C17:0 iso	4.4	16.629
C16:0	4.2	16
C18:0	3.1	18
C18:2 ω6,9c/C18:0 ANTE	1.3	17.724
C16:0 iso	1.3	15.626
C14:0	1	14
C20:0	0.8	20
C14:0 ISO	0.7	13.618
C13:0 iso	0.4	12.612
C19:0 ISO	0.4	18.633
C19:0 ANTEISO	0.3	18.729

API® Coryne:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitrateNIT	PyrazinamidasePYZ	Pyrrolidonyl arylamidasePYRA	Alkaline phosphatasePAL	beta-Glucuronidasebeta GUR	beta-Galactosidasebeta GAL	alpha-Glucosidasealpha GLU	N-Acetyl-beta-Glucosidasebeta NAG	Esculin hydrolysis/beta-GlucosidaseESC	Urease/urea hydrolysisURE	Gelatinase/gelatin hydrolysisGEL	Control fermentationControl	Fermentation of D-glucoseGLU	Fermentation of D-riboseRIB	Fermentation of D-xyloseXYL	Fermentation of D-mannitolMAN	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of sucroseSAC	Fermentation of glycogenGLYG	CatalaseCAT
[Ref.: #52571]	2975	+	-	+	+	+	+	+	-	+	+	-	-	+	+	+	-	+	+	+	-	+

API® ID32STA:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	Ornithine decarboxylaseODC	Esculin hydrolysisESC	Fermentation of D-glucoseGLU	Fermentation of D-fructoseFRU	Fermentation of D-mannoseMNE	Fermentation of maltoseMAL	Fermentation of lactoseLAC	Fermentation of trehaloseTRE	Fermentation of D-mannitolMAN	Fermentation of raffinoseRAF	Fermentation of D-riboseRIB	Fermentation of cellobioseCEL	Reduction of nitrateNIT	Acetoin production (Voges Proskauer test)VP	beta-Galactosidasebeta GAL	L-arginine arylamidaseArgA	Alkaline phosphatasePAL	Pyrrolidonyl arylamidasePyrA	Novobiocin resistanceNOVO	Fermentation of sucroseSAC	Fermentation of N-acetyl-glucosamineNAG	Fermentation of turanoseTUR	Fermentation of arabinoseARA	beta-Glucuronidasebeta GUR
[Ref.: #52571]	2053	+	-	-	-	+	+	+	+	+	+	-	-	-	-	+	+	+	-	+	-	+	+	+	-	-	+
[Ref.: #2511]	5810	+	-	-	-	+	+	+	+	+	+	-	-	-	-	+	+	+	-	+	+	+	+	+	+	-	+

API® STA:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from maltoseMAL	Acid from lactoseLAC	Acid from trehaloseTRE	Acid from D-mannitolMAN	Acid from xylitolXLT	Acid from melibioseMEL	Reduction of nitrateNIT	Alkaline phosphatasePAL	Acetoin production (Voges Proskauer test)VP	Acid from raffinoseRAF	Acid from D-xyloseXYL	Acid from sucroseSAC	Acid from methyl-alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Arginine dihydrolaseADH	Urease/urea hydrolysisURE	Resistance to lysostaphin (EC 3.4.24.75)LSTR
[Ref.: #52571]	44	not determinedn.d.	-	+	+	+	+	+	+	-	-	-	+	+	+	-	+	+	-	+	-	+

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #52571]	4602	-	+	+	+	-	-	-	-	-	-	+	-	-	+	+	-	-	-	-	-
[Ref.: #124004]	7645	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #52571]	Sampling date	1978
[Ref.: #52571]	Geographic location (country and/or sea, region)	Brest
[Ref.: #52571]	Country	France
[Ref.: #52571]	Country ISO 3 Code	FRA
[Ref.: #52571]	Continent	Europe

[Ref.: #41139]	Geographic location (country and/or sea, region)	Brest
[Ref.: #41139]	Country	France
[Ref.: #41139]	Country ISO 3 Code	FRA
[Ref.: #41139]	Continent	Europe

[Ref.: #124004]	Geographic location (country and/or sea, region)	Brest
[Ref.: #124004]	Country	France
[Ref.: #124004]	Country ISO 3 Code	FRA
[Ref.: #124004]	Continent	Europe
[Ref.: #124004]	Isolation date	1978
* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #2511]	Pathogenicity (human)	yes, in single cases
[Ref.: #2511]	Pathogenicity (animal)	yes, in single cases
[Ref.: #2511]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #124004]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Staphylococcus xylosus strain DSM 6179 16S ribosomal RNA gene, partial sequence	AY688109	464	GenBank ENA	1288 tax ID	*

Availability in culture collections External links

[Ref.: #2511]

Culture collection no.

DSM 6179, ATCC 35663, CCUG 35177, NCIMB 13636, CIP 103720

[Ref.: #83728]

SI-ID 41215

References

#2511

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6179

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#41139 ; Curators of the CIP;
#52571 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 35177

#68375

Automatically annotated from API ID32STA .

#68378

Automatically annotated from API STA .

#68379

Automatically annotated from API Coryne .

#68382

Automatically annotated from API zym .

#83728

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID41215.1 )

#124004 Collection of Institut Pasteur ; Curators of the CIP; CIP 103720
* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Staphylococcus xylosus in external resources:
SILVA
BRENDA
PANGAEA
GBIF