Name: Sediminispirochaeta sinaica SL
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 14333

Type strain:

Species: Sediminispirochaeta sinaica

Strain Designation: SL

Culture col. no.: DSM 14994, UNIQEM U 783

Strain history: <- G. A. Dubinina, Russian Academy of Sciences, Inst. of Microbiology, Moscow, Russia <- N. M. Lescheva {1988}

NCBI tax ID(s): 1266648 (species)

SI-ID 400417

DSM 14994

Section

Sediminispirochaeta sinaica SL is an anaerobe, mesophilic bacterium that was isolated from cyanobacterial mat from the littoral of a meromictic, hypersaline lake.

anaerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Spirochaetota*
	Class	*Spirochaetia*
	Order	*Spirochaetales*
	Family	*Spirochaetaceae*
	Genus	*Sediminispirochaeta*
	Species	**Sediminispirochaeta sinaica**
	Full Scientific Name (LPSN)	Sediminispirochaeta sinaica (Dubinina et al. 2015) Shivani et al. 2016

Synonym

Spirochaeta sinaica

Information on morphological and physiological properties Morphology

[Ref.: #5660]

Incubation period

>14 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5660]

Culture medium

SALINISPIRA (L21 LS) MEDIUM (DSMZ Medium 1526)

[Ref.: #5660]

Culture medium growth

[Ref.: #5660]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5660]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #5660]			growth	28 °C

[Ref.: #5660]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #5660]

Oxygen tolerance

anaerobe

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5660]	Sample type/isolated from	cyanobacterial mat from the littoral of a meromictic, hypersaline lake
[Ref.: #5660]	Geographic location (country and/or sea, region)	Sinai shore of the Gulf of Eilat, Solar Lake
[Ref.: #5660]	Country	Egypt
[Ref.: #5660]	Country ISO 3 Code	EGY
[Ref.: #5660]	Continent	Africa
[Ref.: #5660]	Geographic location	29.4225°/34.8300°
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Lake (large)
#Environmental	#Microbial community	#Microbial mat
#Host	#Microbial	#Bacteria
#Condition	#Saline	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KC261846 (>99% sequence identity) for Sediminispirochaeta sinaica subclade from Microbeatlas

Aquatic Samples	15
Soil Samples	2
Animal Samples	3
Plant Samples	1
Total Samples	21

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5660]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #5660]	Sediminispirochaeta sinaica strain SL 16S ribosomal RNA gene, partial sequence	KC261846	1444	ENA	1266648 tax ID

[Ref.: #5660]

GC-content

44.7 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #5660]

Culture collection no.

DSM 14994, UNIQEM U 783

[Ref.: #83479]

SI-ID 400417

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Spirochaeta sinaica sp. nov., a halophilic spirochaete isolated from a cyanobacterial mat.	Dubinina G, Grabovich M, Leshcheva N, Gronow S, Gavrish E, Akimov V	Int J Syst Evol Microbiol	10.1099/ijsem.0.000506	2015	*

References

#5660

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 14994

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#83479

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID400417.1 )

* These data were automatically processed and therefore are not curated

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