Neisseria lactamica (CCUG 796, ATCC 23972, NCTC 10616)

Name: Neisseria lactamica (CCUG 796, ATCC 23972, NCTC 10616)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 141308

Type strain

Culture col. no. CCUG 796 ATCC 23972 NCTC 10616

NCBI tax ID(s) 486

Special Collections CCUG

Links

Neisseria lactamica CCUG 796 is a bacterium that was isolated from Human cerebrospinal fluid.

genome sequence Bacteria

Name and taxonomic classification

SI-ID 38307

ATCC 23972,NCTC 10616,CCUG 796

@ref 20215

Last LPSN update 2026-05-29 08:39:55

Domain Bacteria

Phylum Pseudomonadota

Class Betaproteobacteria

Order Neisseriales

Family Neisseriaceae

Genus Neisseria

Species Neisseria lactamica

Full scientific name Neisseria lactamica corrig. Hollis et al. 1969 (Approved Lists 1980)

Synonyms (1)

Neisseria lactamicus

BacDive ID	Other strains from **Neisseria lactamica** (15)	Type strain
10467	N. lactamica DSM 4691, ATCC 23970, NCTC 10617, CCUG 5853, ... (type strain)
135081	N. lactamica 9764, CIP 107857
135325	N. lactamica AmMS 118, CIP 103665, ATCC 49142
135685	N. lactamica LNP N 104, CIP 73.27
135686	N. lactamica LNP N 105, CIP 73.28
136912	N. lactamica 8064, CIP 107855
138025	N. lactamica CIP 102541, ATCC 23971, NCTC 10618, NCDC ...
138997	N. lactamica Tazir, CIP 76.123
141849	N. lactamica CCUG 7757
143076	N. lactamica CCUG 17016
143165	N. lactamica CCUG 17628, CCM 4402
144761	N. lactamica CCUG 26479
144762	N. lactamica CCUG 26480
144763	N. lactamica CCUG 26481
151815	N. lactamica CCUG 44970

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	99.25

Culture and growth conditions

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125438		93.878
125439		99.318

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68377	15824 ChEBI	D-fructose	-	builds acid from	from API NH
68377	17634 ChEBI	D-glucose	+	builds acid from	from API NH
68377	17306 ChEBI	maltose	+	builds acid from	from API NH
68377	18257 ChEBI	ornithine	-	degradation	from API NH
68377	17992 ChEBI	sucrose	-	builds acid from	from API NH
68377	27897 ChEBI	tryptophan	-	energy source	from API NH
68377	16199 ChEBI	urea	-	hydrolysis	from API NH

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68377	35581 ChEBI	indole		from API NH

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68377	35581 ChEBI	indole	-	from API NH

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68377	alkaline phosphatase	-	3.1.3.1	from API NH
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	+	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68377	beta-lactamase	-	3.5.2.6	from API NH
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
68377	gamma-glutamyltransferase	-	2.3.2.2	from API NH
68382	leucine arylamidase	+	3.4.11.1	from API zym
68377	lipase	-		from API NH
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
68377	ornithine decarboxylase	-	4.1.1.17	from API NH
68382	trypsin	-	3.4.21.4	from API zym
68377	tryptophan deaminase	-	4.1.99.1	from API NH
68377	urease	-	3.5.1.5	from API NH
68382	valine arylamidase	-		from API zym

Fatty acid profile

Metadata FA analysis

@ref

44270

Fatty acid	Percentage	ECL
C16:1 ω7c	42	15.819
C16:0	17.5	16
C18:1 ω7c /12t/9t	13.5	17.824
C12:0	9.4	12
C14:0	6.5	14
C12:0 3OH	5.3	13.455
C14:0 3OH/C16:1 ISO I	2.6	15.485
C16:1 ω5c	1.4	15.908
C18:2 ω6,9c/C18:0 ANTE	1.3	17.724
C13:0 ISO 2OH	0.6	13.814

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
44270	-	-	-	-	-	+	-	-	-	-	+	-	-	+	-	-	-	-	-	-

API NH

@ref	PEN	GLU	FRU	MAL	SAC	ODC	URE	LIP	PAL	beta GAL	ProA	GGT	IND
44270	-	+	-	+	-	-	-	-	-	-	-	-	-
44270	-	+	-	+	-	-	-	-	-	+	+	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body Product	#Fluids	#Cerebrospinal fluid
#Infection	#Patient	-

Isolation

@ref	Sample type	Host species	Sampling date	Country	Country ISO 3 Code	Continent
44270	Human cerebrospinal fluid	Homo sapiens	1965	USA	USA	North America

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	54949_A01 assembly for Neisseria lactamica NCTC10616	contig	GCA_900454145	486.186	2814123384	486	77.95

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: 54949_A01 assembly for Neisseria lactamica NCTC10616
BV-BRC: 486.186

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	82.56	no
125439	motility	BacteriaNetⓘ	no	71.32	no
125439	gram_stain	BacteriaNetⓘ	negative	84.03	no
125439	spore_formation	BacteriaNetⓘ	no	99.32	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Neisseria lactamica strain NCTC10616
PATRIC: 486.186

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	99.25	no
125438	anaerobic	anaerobicⓘ	no	95.58	no
125438	spore-forming	spore-formingⓘ	no	93.88	no
125438	aerobic	aerobicⓘ	no	55.65	no
125438	thermophilic	thermophileⓘ	no	97.96	no
125438	flagellated	motile2+ⓘ	no	87.92	no

Literature

Title	Authors	Journal	DOI	Year
Characterization of a transcriptional TPP riboswitch in the human pathogen Neisseria meningitidis.	Righetti F, Materne SL, Boss J, Eichner H, Charpentier E, Loh E.	RNA Biol	10.1080/15476286.2020.1727188	2020
Partial Reassociation Between the Deoxyribonucleic Acids of Neisseria lactamicus and Neisseria meningitidis.	Weiss E, Wilson NN, Schramek S, Hill JC	Infect Immun	10.1128/iai.3.2.274-277.1971	1971

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#44270	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 796
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68377	Automatically annotated from API NH .
#68382	Automatically annotated from API zym .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Neisseria lactamica (CCUG 796, ATCC 23972, NCTC 10616)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Physiology and metabolism

Spore formation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

Fatty acid profile

API zym

API NH

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_900454145

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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