Name: Sphingobacterium multivorum 65-80
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 14121

Type strain:

Species: Sphingobacterium multivorum

Strain Designation: 65-80

Variant: Isotype of BacDive ID 14120

Culture col. no.: DSM 15469, NCTC 11034, ATCC 33613, CIP 80.53, ATCC 33298, GIFU 926

Strain history: CIP <- 1980, C. Richard, Inst. Pasteur, Paris, France: strain 65-80 <- NCTC <- 1973, R.E. Weaver, CDC: strain B3159, Flavobacterium multivorum

NCBI tax ID(s): 28454 (species)

SI-ID 389491

ATCC 33298, NCTC 11034, CIP 80.53, DSM 15469

Special Collections

DSMZ
CIP

Other strains from Sphingobacterium multivorum

Section

Sphingobacterium multivorum 65-80 is an obligate aerobe, Gram-negative bacterium of the family Sphingobacteriaceae.

Gram-negative
obligate aerobe
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Sphingobacteriia*
	Order	*Sphingobacteriales*
	Family	*Sphingobacteriaceae*
	Genus	*Sphingobacterium*
	Species	**Sphingobacterium multivorum**
	Full Scientific Name (LPSN)	Sphingobacterium multivorum (Holmes et al. 1981) Yabuuchi et al. 1983

Synonym

Flavobacterium multivorum

Information on morphological and physiological properties Morphology

[Ref.: #121176]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %97.604

[Ref.: #121176]	Cell shape	rod-shaped

[Ref.: #121176]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5942]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #5942]

Culture medium growth

[Ref.: #5942]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5942]

Culture medium composition

expand / minimize

[Ref.: #38426]

Culture medium

MEDIUM 3 - Columbia agar

[Ref.: #38426]

Culture medium growth

[Ref.: #38426]

Culture medium composition

expand / minimize

[Ref.: #121176]

Culture medium

CIP Medium 72

[Ref.: #121176]

Culture medium growth

[Ref.: #121176]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #121176]

Culture medium

CIP Medium 3

[Ref.: #121176]

Culture medium growth

[Ref.: #121176]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #5942]			growth	30 °C
[Ref.: #38426]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #121176]

Oxygen tolerance

obligate aerobe

[Ref.: #69481]

Ability of spore formation

no Confidence in %100

	Metabolite utilization	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #121176]		nitrate ChEBI	-	reduction
[Ref.: #121176]		nitrite ChEBI	-	reduction

	Metabolite production	Metabolite	Production
[Ref.: #121176]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	+	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	+	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	+	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #121176]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #121176]	oxidase	+
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #121176]	urease	+	3.5.1.5
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #121176]	13463	-	+	+	+	-	+	+	-	+	-	+	+	+	-	-	+	+	+	+	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #121176]	Sample type/isolated from	Blood
[Ref.: #121176]	Geographic location (country and/or sea, region)	New Jersey
[Ref.: #121176]	Country	United States of America
[Ref.: #121176]	Country ISO 3 Code	USA
[Ref.: #121176]	Continent	North America

[Ref.: #38426]	Geographic location (country and/or sea, region)	New Jersey
[Ref.: #38426]	Country	USA
[Ref.: #38426]	Country ISO 3 Code	USA
[Ref.: #38426]	Continent	North America
* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5942]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #121176]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Sphingobacterium multivorum NCTC11034	GCA_900457115	contig	GenBank ENA	28454 tax ID	*
[Ref.: #66792]	Sphingobacterium multivorum strain FDAARGOS_1143	28454.16	complete	PATRIC	28454 tax ID	*
[Ref.: #66792]	Sphingobacterium multivorum strain NCTC11034	28454.5	wgs	PATRIC	28454 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Sphingobacterium multivorum strain FDAARGOS_1143 strain Not applicable PATRIC: 28454.16
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Sphingobacterium multivorum strain FDAARGOS_1143 strain Not applicable PATRIC: 28454.16
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	97.604	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	95.472	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	88.478	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	87.503	yes
[Ref.: #69480]	thermophilic	thermophileⓘ	no	98.5	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	86.042	no

Availability in culture collections External links

[Ref.: #5942]

Culture collection no.

DSM 15469, NCTC 11034, ATCC 33613, CIP 80.53, ATCC 33298, GIFU 926

[Ref.: #83288]

SI-ID 389491

Literature:

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Structural analysis of sphingophospholipids derived from Sphingobacterium spiritivorum, the type species of genus Sphingobacterium.	Naka T, Fujiwara N, Yano I, Maeda S, Doe M, Minamino M, Ikeda N, Kato Y, Watabe K, Kumazawa Y, Tomiyasu I, Kobayashi K	Biochim Biophys Acta	10.1016/j.bbalip.2003.10.010	2003	*

References

#5942

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15469

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#38426 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68382

Automatically annotated from API zym .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#83288

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID389491.1 )

#121176 Collection of Institut Pasteur ; Curators of the CIP; CIP 80.53
* These data were automatically processed and therefore are not curated

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Sphingobacterium multivorum strain FDAARGOS_1143 strain Not applicable

Sphingobacterium multivorum strain FDAARGOS_1143 strain Not applicable

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