Name: Endozoicomonas acroporae Acr-14
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140757

Type strain:

Species: Endozoicomonas acroporae

Strain Designation: Acr-14

Culture col. no.: BCRC 80922, LMG 29482, KCTC 42901

Strain history: <- Wen-Ming Chen, National Kaohsiung Marine Univ.

NCBI tax ID(s): 1701104 (species)

Section

Endozoicomonas acroporae Acr-14 is an aerobe, Gram-negative, rod-shaped bacterium that forms circular colonies and was isolated from Acropora coral collected off the Kenting coast of Southern Taiwan.

colony-forming
Gram-negative
rod-shaped
aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Oceanospirillales*
	Family	*Endozoicomonadaceae*
	Genus	*Endozoicomonas*
	Species	**Endozoicomonas acroporae**
	Full Scientific Name (LPSN)	Endozoicomonas acroporae Sheu et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #43535]	Gram stain	negative

[Ref.: #43535]	Cell length	2-3 µm

[Ref.: #43535]	Cell width	0.5-0.8 µm

[Ref.: #43535]	Cell shape	rod-shaped

[Ref.: #43535]	Motility	no

[Ref.: #43535]	Colony size	0.8-2.2 mm
[Ref.: #43535]	Colony color	creamy white
[Ref.: #43535]	Colony shape	circular
[Ref.: #43535]	Incubation period	3 days
[Ref.: #43535]	Cultivation medium used	MA agar

Information on culture and growth conditions Culture and growth conditions

[Ref.: #43535]

Culture medium

Marine agar (MA)

[Ref.: #43535]

Culture medium growth

		Temperature
[Ref.: #43535]	growth	20-30 °C
[Ref.: #43535]	optimum	30 °C
[Ref.: #67771]	growth	30 °C

[Ref.: #43535]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #43535]			optimum	7
[Ref.: #43535]			growth	5-10

Information on physiology and metabolism Physiology and metabolism

[Ref.: #43535]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #43535]		NaCl		growth	1-5	%
[Ref.: #43535]		NaCl		optimum	2	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #43535]	2-oxobutanoate ChEBI	+	carbon source
[Ref.: #43535]	2-oxoglutarate ChEBI	+	carbon source
[Ref.: #43535]	2-oxopentanoate ChEBI	+	carbon source
[Ref.: #43535]	adipate ChEBI	-	assimilation
[Ref.: #43535]	adipate ChEBI	-	hydrolysis
[Ref.: #43535]	alpha-cyclodextrin ChEBI	+	carbon source
[Ref.: #43535]	arabinose ChEBI	-	assimilation
[Ref.: #43535]	arabinose ChEBI	-	hydrolysis
[Ref.: #43535]	beta-hydroxybutyrate ChEBI	+	carbon source
[Ref.: #43535]	carboxymethylcellulose ChEBI	-	hydrolysis
[Ref.: #43535]	casein	-	hydrolysis
[Ref.: #43535]	chitin ChEBI	-	hydrolysis
[Ref.: #43535]	citrate ChEBI	-	assimilation
[Ref.: #43535]	citrate ChEBI	-	hydrolysis
[Ref.: #43535]	D-alanine ChEBI	+	carbon source
[Ref.: #43535]	D-fructose ChEBI	+	carbon source
[Ref.: #43535]	D-galactonic acid lactone ChEBI	+	carbon source
[Ref.: #43535]	D-galactose ChEBI	+	carbon source
[Ref.: #43535]	D-galacturonic acid ChEBI	+	carbon source
[Ref.: #43535]	D-serine ChEBI	+	carbon source
[Ref.: #43535]	D-sorbitol ChEBI	+	carbon source
[Ref.: #43535]	decanoate ChEBI	-	assimilation
[Ref.: #43535]	decanoate ChEBI	-	hydrolysis
[Ref.: #43535]	esculin ChEBI	-	assimilation
[Ref.: #43535]	gelatin ChEBI	-	assimilation
[Ref.: #43535]	gentiobiose ChEBI	+	carbon source
[Ref.: #43535]	gluconate ChEBI	+	assimilation
[Ref.: #43535]	glucose ChEBI	-	assimilation
[Ref.: #43535]	glucose ChEBI	-	fermentation
[Ref.: #43535]	glucose ChEBI	-	hydrolysis
[Ref.: #43535]	glucose 1-phosphate ChEBI	+	carbon source
[Ref.: #43535]	L-alaninamide ChEBI	+	carbon source
[Ref.: #43535]	L-alanine ChEBI	+	carbon source
[Ref.: #43535]	L-phenylalanine ChEBI	+	carbon source
[Ref.: #43535]	L-rhamnose ChEBI	+	carbon source
[Ref.: #43535]	L-serine ChEBI	+	carbon source
[Ref.: #43535]	lactose ChEBI	+	carbon source
[Ref.: #43535]	lactulose ChEBI	+	carbon source
[Ref.: #43535]	malate ChEBI	-	assimilation
[Ref.: #43535]	malate ChEBI	-	hydrolysis
[Ref.: #43535]	maltose hydrate	-	assimilation
[Ref.: #43535]	maltose hydrate	-	hydrolysis
[Ref.: #43535]	mannitol ChEBI	+	assimilation
[Ref.: #43535]	mannose ChEBI	-	assimilation
[Ref.: #43535]	mannose ChEBI	-	hydrolysis
[Ref.: #43535]	myo-inositol ChEBI	+	carbon source
[Ref.: #43535]	N-acetylgalactosamine ChEBI	+	carbon source
[Ref.: #43535]	N-acetylglucosamine ChEBI	+	assimilation
[Ref.: #43535]	nitrate ChEBI	+	reduction
[Ref.: #43535]	phenylacetate ChEBI	+	assimilation
[Ref.: #43535]	quinate ChEBI	+	carbon source
[Ref.: #43535]	starch ChEBI	-	hydrolysis
[Ref.: #43535]	sucrose ChEBI	+	carbon source
[Ref.: #43535]	tween 20 ChEBI	+	hydrolysis
[Ref.: #43535]	tween 40 ChEBI	+	carbon source
[Ref.: #43535]	tween 40 ChEBI	+	hydrolysis
[Ref.: #43535]	tween 60 ChEBI	+	hydrolysis
[Ref.: #43535]	tween 80 ChEBI	+	carbon source
[Ref.: #43535]	tween 80 ChEBI	+	hydrolysis
[Ref.: #43535]	urea ChEBI	-	assimilation
[Ref.: #43535]	urocanic acid ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Antibiotic sensitivity	Concentration
[Ref.: #43535]	ampicillin ChEBI	yes	10	µg (disc)
[Ref.: #43535]	chloramphenicol ChEBI	yes	30	µg (disc)
[Ref.: #43535]	gentamicin ChEBI	yes	10	µg (disc)
[Ref.: #43535]	kanamycin ChEBI	yes	30	µg (disc)
[Ref.: #43535]	nalidixic acid ChEBI	yes	30	µg (disc)
[Ref.: #43535]	novobiocin ChEBI	yes	30	µg (disc)
[Ref.: #43535]	penicillin g ChEBI	yes	10	Unit (disc)
[Ref.: #43535]	rifampicin ChEBI	yes	5	µg (disc)
[Ref.: #43535]	streptomycin ChEBI	yes	10	µg (disc)
[Ref.: #43535]	sulfamethoxazole ChEBI	yes	23.75	µg (disc)
[Ref.: #43535]	tetracycline ChEBI	yes	30	µg (disc)
[Ref.: #43535]	trimethoprim ChEBI	yes	1.25	µg (disc)
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #43535]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #43535]	acid phosphatase	+	3.1.3.2
[Ref.: #43535]	alkaline phosphatase	+	3.1.3.1
[Ref.: #43535]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #43535]	alpha-fucosidase	-	3.2.1.51
[Ref.: #43535]	alpha-galactosidase	-	3.2.1.22
[Ref.: #43535]	alpha-glucosidase	-	3.2.1.20
[Ref.: #43535]	alpha-mannosidase	-	3.2.1.24
[Ref.: #43535]	arginine dihydrolase	-	3.5.3.6
[Ref.: #43535]	beta-galactosidase	-	3.2.1.23
[Ref.: #43535]	beta-glucosidase	-	3.2.1.21
[Ref.: #43535]	beta-glucuronidase	-	3.2.1.31
[Ref.: #43535]	catalase	+	1.11.1.6
[Ref.: #43535]	cystine arylamidase	+	3.4.11.3
[Ref.: #43535]	cytochrome oxidase	+	1.9.3.1
[Ref.: #43535]	DNase	-
[Ref.: #43535]	esterase (C 4)	+
[Ref.: #43535]	esterase Lipase (C 8)	+
[Ref.: #43535]	leucine arylamidase	+	3.4.11.1
[Ref.: #43535]	lipase (C 14)	-
[Ref.: #43535]	N-acetyl-beta-glucosaminidase	-	3.2.1.52
[Ref.: #43535]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #43535]	trypsin	-	3.4.21.4
[Ref.: #43535]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #43535]

Fatty acid	Percentage
C15:0 iso	29.7
C16:1ω7c / C16:1ω6c	24
C17:0 iso 3OH	16.7
C15:1 iso G	6.3
C16:0 3OH	4.6
C16:0-10-methyl / iso-C17:1ω9c	4.2
C15:0 iso 3OH	3.8
C16:0	2.3
C15:1ω6c	1.6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #43535]	Sample type/isolated from	Acropora coral collected off the Kenting coast of Southern Taiwan
[Ref.: #43535]	Geographic location (country and/or sea, region)	Pingtung County
[Ref.: #43535]	Country	Taiwan
[Ref.: #43535]	Country ISO 3 Code	TWN
[Ref.: #43535]	Continent	Asia
[Ref.: #43535]	Geographic location	21.8760°/120.7240°

[Ref.: #67771]	Sample type/isolated from	From coral
[Ref.: #67771]	Geographic location (country and/or sea, region)	Pingtung County
[Ref.: #67771]	Country	Taiwan
[Ref.: #67771]	Country ISO 3 Code	TWN
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Host	#Invertebrates (Other)	#Cnidaria (Corals)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence LN875493 (>99% sequence identity) for Endozoicomonas acroporae subclade from Microbeatlas

Aquatic Samples	185
Soil Samples
Animal Samples	56
Plant Samples
Total Samples	241

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #43535]	16S rRNA gene sequence	LN875493		GenBank

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Endozoicomonas acroporae Acr-14	GCA_002864045	contig	GenBank	1701104 tax ID	*
[Ref.: #66792]	Endozoicomonas acroporae Acr-14	2839589109	draft	JGI IMG/M	1701104 tax ID	*

[Ref.: #43535]

GC-content

49.1 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #43535]

Culture collection no.

BCRC 80922, LMG 29482, KCTC 42901

Literature:

Topic	Title	Authors	Journal	DOI	Year
Genetics	Comparative genomics: Dominant coral-bacterium Endozoicomonas acroporae metabolizes dimethylsulfoniopropionate (DMSP).	Tandon K, Lu CY, Chiang PW, Wada N, Yang SH, Chan YF, Chen PY, Chang HY, Chiou YJ, Chou MS, Chen WM, Tang SL	ISME J	10.1038/s41396-020-0610-x	2020	*
Phylogeny	Endozoicomonas coralli sp. nov., isolated from the coral Acropora sp.	Chen WM, Lin KR, Sheu SY	Arch Microbiol	10.1007/s00203-018-1591-2	2018	*
Genetics	Draft Genome Sequence of Endozoicomonas acroporae Strain Acr-14(T), Isolated from Acropora Coral.	Tandon K, Chiang PW, Chen WM, Tang SL	Genome Announc	10.1128/genomeA.01576-17	2018	*
Phylogeny	Endozoicomonas acroporae sp. nov., isolated from Acropora coral.	Sheu SY, Lin KR, Hsu MY, Sheu DS, Tang SL, Chen WM	Int J Syst Evol Microbiol	10.1099/ijsem.0.002194	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#43535

Shih-Yi Sheu, Kai-Rou Lin, Ming-yuan Hsu, Der-Shyan Sheu, Sen-Lin Tang, Wen-Ming Chen: Endozoicomonas acroporae sp. nov., isolated from Acropora coral. IJSEM 67: 3791 - 3797 2017 ( DOI 10.1099/ijsem.0.002194 , PubMed 28879847 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Endozoicomonas acroporae in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF