Name: Lachnospiraceae bacterium 3/1/57 FAA CT1 A
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140341

Type strain:

Species: Lachnospiraceae bacterium

Strain Designation: 3/1/57 FAA CT1 A

Culture col. no.: DSM 24404, ATCC BAA-2278

Strain history: <- E. Allen-Vercoe, Univ. Guelph, Ontario, Canada; 3/1/57 FAA CT1 A <- Univ. Calgary, Canada

NCBI tax ID(s): 1898203 (species)

Other strains from Lachnospiraceae bacterium

L. bacterium 2/1/46 FAA, DSM 24430, ATCC BAA-2279 (type strain)
L. bacterium CLA-AA-M04, SCD101-BHI5-F9, DSM ...

Section

Lachnospiraceae bacterium 3/1/57 FAA CT1 A is a mesophilic bacterium that was isolated from Clinical sample, human gut biopsy.

mesophilic

Information on the name and the taxonomic classification. Name and taxonomic classification

[Ref.: #42948]	Domain	Bacteria
[Ref.: #42948]	Phylum	Firmicutes
[Ref.: #42948]	Class	Clostridia
[Ref.: #42948]	Order	Not assigned to order
[Ref.: #42948]	Family	Lachnospiraceae
[Ref.: #42948]	Genus	Lachnospiraceae
[Ref.: #42948]	Species	Lachnospiraceae bacterium
[Ref.: #42948]	Full Scientific Name	Lachnospiraceae bacterium
[Ref.: #42948]	Strain Designation	3/1/57 FAA CT1 A

Information on culture and growth conditions Culture and growth conditions

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Culture medium

PYG MEDIUM (MODIFIED) (DSMZ Medium 104)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #42948]			growth	37 °C

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Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68380]	arginine ChEBI	-	hydrolysis	* from API rID32A
[Ref.: #68380]	D-mannose ChEBI	-	fermentation	* from API rID32A
[Ref.: #68380]	L-glutamate ChEBI	-	degradation	* from API rID32A
[Ref.: #68380]	nitrate ChEBI	-	reduction	* from API rID32A
[Ref.: #68380]	raffinose ChEBI	-	fermentation	* from API rID32A
[Ref.: #68380]	tryptophan ChEBI	-	energy source	* from API rID32A
[Ref.: #68380]	urea ChEBI	+	hydrolysis	* from API rID32A

	Metabolite production	Metabolite	Production
[Ref.: #68380]		indole ChEBI	no	* from API rID32A

	Physiological tests	Metabolite	Indole test
[Ref.: #68380]		indole ChEBI	-	* from API rID32A

	Enzyme	Enzyme activity	EC number
[Ref.: #68380]	alanine arylamidase	-	3.4.11.2	* from API rID32A
[Ref.: #68380]	alkaline phosphatase	-	3.1.3.1	* from API rID32A
[Ref.: #68380]	alpha-arabinosidase	+	3.2.1.55	* from API rID32A
[Ref.: #68380]	alpha-fucosidase	+	3.2.1.51	* from API rID32A
[Ref.: #68380]	alpha-galactosidase	+	3.2.1.22	* from API rID32A
[Ref.: #68380]	alpha-glucosidase	+	3.2.1.20	* from API rID32A
[Ref.: #68380]	arginine dihydrolase	-	3.5.3.6	* from API rID32A
[Ref.: #68380]	beta-galactosidase	+	3.2.1.23	* from API rID32A
[Ref.: #68380]	beta-glucosidase	+	3.2.1.21	* from API rID32A
[Ref.: #68380]	beta-glucuronidase	-	3.2.1.31	* from API rID32A
[Ref.: #68380]	glutamate decarboxylase	-	4.1.1.15	* from API rID32A
[Ref.: #68380]	glutamyl-glutamate arylamidase	-		* from API rID32A
[Ref.: #68380]	glycin arylamidase	-		* from API rID32A
[Ref.: #68380]	histidine arylamidase	-		* from API rID32A
[Ref.: #68380]	leucine arylamidase	-	3.4.11.1	* from API rID32A
[Ref.: #68380]	leucyl glycin arylamidase	-	3.4.11.1	* from API rID32A
[Ref.: #68380]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API rID32A
[Ref.: #68380]	phenylalanine arylamidase	-		* from API rID32A
[Ref.: #68380]	proline-arylamidase	-	3.4.11.5	* from API rID32A
[Ref.: #68380]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API rID32A
[Ref.: #68380]	serine arylamidase	-		* from API rID32A
[Ref.: #68380]	tryptophan deaminase	-	4.1.99.1	* from API rID32A
[Ref.: #68380]	tyrosine arylamidase	-		* from API rID32A
[Ref.: #68380]	urease	+	3.5.1.5	* from API rID32A
	Only first 10 entries are displayed. Click here to see all.

API® rID32A:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	alpha-Galactosidasealpha GAL	beta-Galactosidasebeta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha-Glucosidasealpha GLU	beta-Glucosidasebeta GLU	alpha-Arabinosidasealpha ARA	beta-Glucuronidasebeta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	Fermentation of D-mannoseMNE	Fermentation of raffinoseRAF	Glutamate decarboxylaseGDC	alpha-Fucosidasealpha FUC	Reduction of nitrateNIT	Indole productionIND	Alkaline phosphatasePAL	L-arginine arylamidaseArgA	Proline arylamidaseProA	Leucyl glycin arylamidaseLGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	Pyrrolidonyl arylamidasePyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
[Ref.: #42948]	13311	not determinedn.d.	not determinedn.d.	+	+	+/-	+	+	+	-	+	-	-	-	+	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-
[Ref.: #42948]	12779	+	-	+	+	+/-	+	+	+	-	+	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #42948]	Sample type/isolated from	Clinical sample, human gut biopsy
[Ref.: #42948]	Geographic location (country and/or sea, region)	Alberta, Calgary
[Ref.: #42948]	Country	Canada
[Ref.: #42948]	Country ISO 3 Code	CAN
[Ref.: #42948]	Continent	North America
[Ref.: #42948]	Geographic location	51.0486°/-114.0710°
* marker position based on {}

Isolation sources categories

#Host	#Human	-
#Host Body-Site	#Gastrointestinal tract	#Stomach
#Infection	#Medical environment	#Clinic
#Infection	#Patient	#Biopsy

What are isolation sources categories?

Availability in culture collections External links

[Ref.: #42948]

Culture collection no.

DSM 24404, ATCC BAA-2278

References

#42948

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 24404

#68380

Automatically annotated from API rID32A .

* These data were automatically processed and therefore are not curated

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