Name: Tistrella bauzanensis BZ78
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 14014

Type strain:

Species: Tistrella bauzanensis

Strain Designation: BZ78

Culture col. no.: DSM 22817, CGMCC 1.10188, LMG 26047

Strain history: <- R. Margesin, Inst. Microbiology, Univ. Innsbruck, Austria; BZ78

NCBI tax ID(s): 657419 (species)

SI-ID 370996

LMG 26047, CGMCC 1.10188, DSM 22817

Section

Tistrella bauzanensis BZ78 is a psychrophilic, motile bacterium that was isolated from soil with high levels of heavy oil and heavy metals.

motile
psychrophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodospirillales*
	Family	*Geminicoccaceae*
	Genus	*Tistrella*
	Species	**Tistrella bauzanensis**
	Full Scientific Name (LPSN)	Tistrella bauzanensis Zhang et al. 2011

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.997

[Ref.: #69480]	Motility	yes Confidence in %93.544

Information on culture and growth conditions Culture and growth conditions

[Ref.: #16532]

Culture medium

R2A MEDIUM (DSMZ Medium 830)

[Ref.: #16532]

Culture medium growth

[Ref.: #16532]

Culture medium link

Medium recipe at MediaDive

[Ref.: #16532]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #16532]			growth	20 °C

[Ref.: #16532]

Temperature range

psychrophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.978

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #16532]	Sample type/isolated from	soil with high levels of heavy oil and heavy metals
[Ref.: #16532]	Geographic location (country and/or sea, region)	South Tyrol, Bozen
[Ref.: #16532]	Country	Italy
[Ref.: #16532]	Country ISO 3 Code	ITA
[Ref.: #16532]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Engineered	#Contamination	#Heavy metal
#Engineered	#Contamination	#Oil (Fuel)
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #16532]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #16532]	Tistrella bauzanensis strain BZ78 16S ribosomal RNA gene, partial sequence	GQ240228	1493	ENA	657419 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Tistrella bauzanensis CGMCC 1.10188	GCA_014636235	contig	GenBank	657419 tax ID	*
[Ref.: #66792]	Tistrella bauzanensis strain CGMCC 1.10188	657419.4	wgs	PATRIC	657419 tax ID	*

[Ref.: #16532]

GC-content

65.8 mol%

thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Tistrella bauzanensis strain CGMCC 1.10188 PATRIC: 657419.4
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Tistrella bauzanensis strain CGMCC 1.10188 PATRIC: 657419.4
[Ref.: #69480]	gram-positive	no	98.351	no
[Ref.: #69480]	anaerobic	no	97.839	no
[Ref.: #69480]	halophile	no	81.594	no
[Ref.: #69480]	spore-forming	no	93.804	no
[Ref.: #69480]	glucose-util	yes	83.907	no
[Ref.: #69480]	thermophile	no	98.836	no
[Ref.: #69480]	flagellated	no	52.42	no
[Ref.: #69480]	aerobic	yes	87.016	no
[Ref.: #69480]	glucose-ferment	no	91.949	no
[Ref.: #69480]	motile	yes	91.225	no

Availability in culture collections External links

[Ref.: #16532]

Culture collection no.

DSM 22817, CGMCC 1.10188, LMG 26047

[Ref.: #83182]

SI-ID 370996

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Tistrella bauzanensis sp. nov., isolated from soil.	Zhang DC, Liu HC, Zhou YG, Schinner F, Margesin R	Int J Syst Evol Microbiol	10.1099/ijs.0.026930-0	2010	*

References

#16532

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22817

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#83182

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID370996.1 )

* These data were automatically processed and therefore are not curated

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Tistrella bauzanensis strain CGMCC 1.10188

Tistrella bauzanensis strain CGMCC 1.10188

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