Name: Campylobacter fetus subsp. testudinum 03-427
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 140076

Type strain:

Species: Campylobacter fetus subsp. testudinum

Strain Designation: 03-427, Blaser 03-427

Culture col. no.: DSM 105764, ATCC BAA-2539, LMG 27499

Strain history: <- LMG; LMG 27499 <- J. A. Wagenaar, Univ. Utrecht, The Netherlands <- M. J. Blaser <- M. J. Blaser and Z.C. Tu; 03-427

NCBI tax ID(s): 1507806 (subspecies)

SI-ID 387767

LMG 27499, ATCC BAA-2539

Section

Campylobacter fetus subsp. testudinum 03-427 is a mesophilic bacterium that was isolated from human blood culture.

mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Epsilonproteobacteria*
	Order	*Campylobacterales*
	Family	*Campylobacteraceae*
	Genus	*Campylobacter*
	Species	**Campylobacter fetus subsp. testudinum**
	Full Scientific Name (LPSN)	Campylobacter fetus subsp. testudinum Fitzgerald et al. 2014

Information on culture and growth conditions Culture and growth conditions

[Ref.: #42683]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #42683]

Culture medium growth

[Ref.: #42683]

Culture medium link

Medium recipe at MediaDive

[Ref.: #42683]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #42683]			growth	37 °C

[Ref.: #42683]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68373]	acetate ChEBI	+	assimilation	* from API CAM
[Ref.: #68373]	D-glucose ChEBI	-	assimilation	* from API CAM
[Ref.: #68373]	nitrate ChEBI	+	reduction	* from API CAM
[Ref.: #68373]	propionate ChEBI	-	assimilation	* from API CAM
[Ref.: #68373]	succinate ChEBI	+	assimilation	* from API CAM
[Ref.: #68373]	urea ChEBI	-	hydrolysis	* from API CAM

	Antibiotica	Metabolite	Antibiotic sensitivity	Concentration		Antibiotic resistance	Concentration
[Ref.: #68373]		erythromycin ChEBI	yes	14	µg				* from API CAM
[Ref.: #68373]		nalidixic acid ChEBI				yes	84	µg	* from API CAM

	Metabolite production	Metabolite	Production
[Ref.: #68373]		hydrogen sulfide ChEBI	no	* from API CAM

	Enzyme	Enzyme activity	EC number
[Ref.: #68373]	catalase	+	1.11.1.6	* from API CAM
[Ref.: #68373]	esterase	-		* from API CAM
[Ref.: #68373]	L-aspartate arylamidase	-	3.4.11.21	* from API CAM
[Ref.: #68373]	pyrrolidonyl arylamidase	-	3.4.19.3	* from API CAM
[Ref.: #68373]	urease	-	3.5.1.5	* from API CAM

API® CAM:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Reduction of nitrateNIT	EsteraseEST	Hippuric acidHIP	gamma-Glutamyl transferaseGGT	Reduction of Triphenyl tetrazolium chlorideTTC	Pyrrolidonyl arylamidasePYRA	L-arginine arylamidaseArgA	L-aspartic acid arylamidaseAspA	Alkaline phosphatasePAL	H2S productionH2S	Assimilation of D-glucoseGLU	Assimilation of succinateSUT	Growth inhibitionNAL	Growth inhibitionCFZ	Assimilation of acetateACE	Assimilation of propionic acidPROP	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Erythromycin resistance (+) sensitivity (-)ERO	CatalaseCAT
[Ref.: #42683]	3874	-	+	-	-	-	-	-	-	-	-	-	-	+	+	+	+	-	+/-	-	-	+
[Ref.: #42683]	3966	-	+	-	+	+/-	+	-	+/-	-	+/-	-	-	+	+	+/-	+	-	-	+	-	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #42683]	Sample type/isolated from	human blood culture
[Ref.: #42683]	Geographic location (country and/or sea, region)	New York
[Ref.: #42683]	Country	USA
[Ref.: #42683]	Country ISO 3 Code	USA
[Ref.: #42683]	Continent	North America
* marker position based on {}

Isolation sources categories

#Infection	#Patient	#Blood culture
#Host	#Human	-
#Host Body Product	#Fluids	#Blood

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Campylobacter fetus subsp. testudinum strain FDAARGOS_1591	1507806.65	complete	PATRIC	1507806 tax ID	*
[Ref.: #66792]	Campylobacter fetus subsp. testudinum strain FDAARGOS_1591	1507806.64	complete	PATRIC	1507806 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Campylobacter fetus subsp. testudinum strain FDAARGOS_1591 PATRIC: 1507806.65
[Ref.: #69480]	motile	yes	92.277	no
[Ref.: #69480]	gram-positive	no	98.849	no
[Ref.: #69480]	anaerobic	no	77.616	no
[Ref.: #69480]	aerobic	no	96.554	no
[Ref.: #69480]	halophile	no	91.198	no
[Ref.: #69480]	spore-forming	no	94.945	no
[Ref.: #69480]	thermophile	no	56.895	yes
[Ref.: #69480]	glucose-util	no	91.907	yes
[Ref.: #69480]	flagellated	yes	69.466	no
[Ref.: #69480]	glucose-ferment	no	88.17	no

Availability in culture collections External links

[Ref.: #42683]

Culture collection no.

DSM 105764, ATCC BAA-2539, LMG 27499

[Ref.: #96489]

SI-ID 387767

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Campylobacter fetus subsp. testudinum subsp. nov., isolated from humans and reptiles.	Fitzgerald C, Tu ZC, Patrick M, Stiles T, Lawson AJ, Santovenia M, Gilbert MJ, van Bergen M, Joyce K, Pruckler J, Stroika S, Duim B, Miller WG, Loparev V, Sinnige JC, Fields PI, Tauxe RV, Blaser MJ, Wagenaar JA	Int J Syst Evol Microbiol	10.1099/ijs.0.057778-0	2014	*
Genetics	Complete Genome Sequence of Campylobacter fetus subsp. testudinum Strain 03-427T.	Gilbert MJ, Miller WG, Yee E, Blaser MJ, Wagenaar JA, Duim B	Genome Announc	10.1128/genomeA.01002-13	2013	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#42683

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 105764

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68373

Automatically annotated from API CAM .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#96489

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID387767.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Campylobacter fetus subsp. testudinum in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Campylobacter fetus subsp. testudinum strain FDAARGOS_1591

Change proposal

Change proposal