Name: Roseospira marina CE2105
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 13960

Type strain:

Species: Roseospira marina

Strain Designation: CE2105

Culture col. no.: DSM 15113

Strain history: <- R. Guyoneaud, IBEAS; CE2105

NCBI tax ID(s): 140057 (species)

SI-ID 128015

ATCC BAA-447, DSM 15113

Section

Roseospira marina CE2105 is a mesophilic, motile bacterium that was isolated from marine sediments.

motile
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodospirillales*
	Family	*Rhodospirillaceae*
	Genus	*Roseospira*
	Species	**Roseospira marina**
	Full Scientific Name (LPSN)	Roseospira marina Guyoneaud et al. 2003

Synonym

"Rhodospira marina"

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %99.999

[Ref.: #69480]	Motility	yes Confidence in %95.94

Information on culture and growth conditions Culture and growth conditions

[Ref.: #5715]

Culture medium

MEDIUM FOR ROSEOSPIRA (DSMZ Medium 998)

[Ref.: #5715]

Culture medium growth

[Ref.: #5715]

Culture medium link

Medium recipe at MediaDive

[Ref.: #5715]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #5715]			growth	30 °C

[Ref.: #5715]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %93
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.961

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #5715]	Sample type/isolated from	marine sediments
[Ref.: #5715]	Geographic location (country and/or sea, region)	Arcachon Bay
[Ref.: #5715]	Country	France
[Ref.: #5715]	Country ISO 3 Code	FRA
[Ref.: #5715]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ298879 (>99% sequence identity) for Roseospira marina subclade from Microbeatlas

Aquatic Samples	2
Soil Samples	1
Animal Samples
Plant Samples
Total Samples	3

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #5715]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Roseospira marina partial 16S rRNA gene, strain CE2105	AJ298879	1406	ENA	140057 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Roseospira marina DSM 15113	2861712243	draft	JGI IMG/M	140057 tax ID	*
[Ref.: #66792]	Roseospira marina DSM 15113	GCA_014197855	scaffold	GenBank	140057 tax ID	*
[Ref.: #66792]	Roseospira marina DSM 15113	GCA_014203135	scaffold	GenBank	140057 tax ID	*
[Ref.: #66792]	Roseospira marina strain DSM 15113	140057.6	wgs	PATRIC	140057 tax ID	*
[Ref.: #66792]	Roseospira marina strain DSM 15113	140057.7	wgs	PATRIC	140057 tax ID	*
[Ref.: #66792]	Roseospira marina strain DSM 15113	140057.4	wgs	PATRIC	140057 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Roseospira marina strain DSM 15113 PATRIC: 140057.4
[Ref.: #69481]	spore-forming	no	93	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Roseospira marina DSM 15113 NCBI: GCA_014197855.1
[Ref.: #69480]	flagellated	yes	59.298	no
[Ref.: #69480]	gram-positive	no	98.584	no
[Ref.: #69480]	anaerobic	yes	74.915	no
[Ref.: #69480]	aerobic	no	92.186	no
[Ref.: #69480]	halophile	no	65.576	no
[Ref.: #69480]	spore-forming	no	92.484	no
[Ref.: #69480]	glucose-util	yes	79.171	no
[Ref.: #69480]	thermophile	no	95.021	no
[Ref.: #69480]	motile	yes	87.655	no
[Ref.: #69480]	glucose-ferment	no	87.62	no

Availability in culture collections External links

[Ref.: #5715]

Culture collection no.

DSM 15113

[Ref.: #83132]

SI-ID 128015

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Characterization of three spiral-shaped purple nonsulfur bacteria isolated from coastal lagoon sediments, saline sulfur springs, and microbial mats: emended description of the genus Roseospira and description of Roseospira marina sp. nov., Roseospira navarrensis sp. nov., and Roseospira thiosulfatophila sp. nov.	Guyoneaud R, Moune S, Eatock C, Bothorel V, Hirschler-Rea A, Willison J, Duran R, Liesack W, Herbert R, Matheron R, Caumette P	Arch Microbiol	10.1007/s00203-002-0454-y	2002	*

References

#5715

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15113

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#83132

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID128015.1 )

* These data were automatically processed and therefore are not curated

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Roseospira marina strain DSM 15113

Roseospira marina DSM 15113

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