Name: Flavobacterium banpakuense 15F3
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 139521

Type strain:

Species: Flavobacterium banpakuense

Strain Designation: 15F3

Culture col. no.: CIP 110594, JCM 16466, KACC 14225

Strain history: CIP <- 2013, J. Kim, Calgary Univ., Calgary, Canada: strain 15F3

NCBI tax ID(s): 659444 (species)

SI-ID 413907

CIP 110594

Section

Flavobacterium banpakuense 15F3 is a mesophilic, Gram-negative, rod-shaped bacterium of the family Flavobacteriaceae.

Gram-negative
rod-shaped
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Flavobacterium*
	Species	**Flavobacterium banpakuense**
	Full Scientific Name (LPSN)	Flavobacterium banpakuense Kim et al. 2011

Information on morphological and physiological properties Morphology

[Ref.: #41805]	Gram stain	negative

[Ref.: #41805]	Cell shape	rod-shaped

[Ref.: #41805]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #41805]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #41805]

Culture medium growth

[Ref.: #41805]

Culture medium composition

expand / minimize

[Ref.: #41805]

Culture medium

CIP Medium 72

[Ref.: #41805]

Culture medium growth

[Ref.: #41805]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #41805]			growth	30 °C
[Ref.: #67770]			growth	30 °C

[Ref.: #41805]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-6

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Leaf-and branch compost at EXPO Park
[Ref.: #67770]	Geographic location (country and/or sea, region)	Osaka
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia

[Ref.: #41805]	Sample type/isolated from	Environment, Leaf and branch compost
[Ref.: #41805]	Geographic location (country and/or sea, region)	EXPO park , Osaka
[Ref.: #41805]	Country	Japan
[Ref.: #41805]	Country ISO 3 Code	JPN
[Ref.: #41805]	Continent	Asia
[Ref.: #41805]	Isolation date	2008-10-01

[Ref.: #41805]	Geographic location (country and/or sea, region)	Osaka
[Ref.: #41805]	Country	Japan
[Ref.: #41805]	Country ISO 3 Code	JPN
[Ref.: #41805]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence GQ281770 (>99% sequence identity) for Flavobacterium from Microbeatlas

Aquatic Samples	36
Soil Samples	27
Animal Samples	7
Plant Samples	8
Total Samples	78

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #41805]

Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Flavobacterium banpakuense strain 15F3 16S ribosomal RNA gene, partial sequence	GQ281770	1472	ENA	659444 tax ID

Availability in culture collections External links

[Ref.: #41805]

Culture collection no.

CIP 110594, JCM 16466, KACC 14225

[Ref.: #96008]

SI-ID 413907

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Flavobacterium chungangensis sp. nov., a Bacterium Isolated from Soil of Chinese Cabbage Garden.	Huq MA, Akter S, Lee SY	Curr Microbiol	10.1007/s00284-018-1456-6	2018	*
Phylogeny	Flavobacterium banpakuense sp. nov., isolated from leaf-and-branch compost.	Kim JJ, Jin HM, Lee HJ, Jeon CO, Kanaya E, Koga Y, Takano K, Kanaya S	Int J Syst Evol Microbiol	10.1099/ijs.0.022467-0	2010	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#41805 Collection of Institut Pasteur ; Curators of the CIP; CIP 110594
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#96008

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID413907.1 )

* These data were automatically processed and therefore are not curated

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