Name: Roseomonas cervicalis E7107
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 138931

Type strain:

Species: Roseomonas cervicalis

Strain Designation: E7107

Culture col. no.: CIP 104027, ATCC 49957, CCM 4881, CCUG 33006

Strain history: CIP <- 1994, ATCC <- D.G. Hollis, CDC, Atlanta, GE, USA: strain E7107 <- New-Jersey State Hlth. Dept. <- College Hosp., Newark, NJ, USA

NCBI tax ID(s): 525371 (strain), 204525 (species)

SI-ID 42779

ATCC 49957, CIP 104027, CCM 4881, VTT E-073035, VTT E-073100

Other strains from Roseomonas cervicalis

R. cervicalis CCUG 39066

Section

Roseomonas cervicalis E7107 is an obligate aerobe, spore-forming, mesophilic bacterium of the family Acetobacteraceae.

motile
spore-forming
mesophilic
obligate aerobe
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodospirillales*
	Family	*Acetobacteraceae*
	Genus	*Roseomonas*
	Species	**Roseomonas cervicalis**
	Full Scientific Name (LPSN)	Roseomonas cervicalis Rihs et al. 1998

Synonym

Pseudoroseomonas cervicalis

Information on morphological and physiological properties Morphology

[Ref.: #40930]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.998

[Ref.: #40930]	Cell shape	rod-shaped

[Ref.: #40930]	Motility	yes
[Ref.: #69480]	Motility	yes Confidence in %90.134

[Ref.: #51315]

Incubation period

2 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #40930]

Culture medium

MEDIUM 3 - Columbia agar

[Ref.: #40930]

Culture medium growth

[Ref.: #40930]

Culture medium composition

expand / minimize

[Ref.: #40930]

Culture medium

CIP Medium 3

[Ref.: #40930]

Culture medium growth

[Ref.: #40930]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #40930]

Culture medium

CIP Medium 72

[Ref.: #40930]

Culture medium growth

[Ref.: #40930]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #40930]		growth	37 °C
[Ref.: #40930]		growth	37-41 °C
[Ref.: #40930]	no	growth	5 °C
[Ref.: #40930]	no	growth	10 °C
[Ref.: #51315]		growth	30-37 °C

[Ref.: #40930]	Temperature range	mesophilic
[Ref.: #40930]	Temperature range	psychrophilic
[Ref.: #51315]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #40930]

Oxygen tolerance

obligate aerobe

[Ref.: #69481]	Ability of spore formation	yes Confidence in %96
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.984

	Salt	Tested relation		Salt conc.
[Ref.: #40930]	NaCl		growth	0-2	%
[Ref.: #40930]	NaCl	no	growth	4	%
[Ref.: #40930]	NaCl	no	growth	6	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #40930]	citrate ChEBI	+	carbon source
[Ref.: #40930]	esculin ChEBI	-	hydrolysis
[Ref.: #40930]	nitrate ChEBI	-	reduction
[Ref.: #40930]	nitrite ChEBI	-	reduction

	Metabolite production	Metabolite	Production
[Ref.: #40930]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #40930]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #40930]	amylase	-
[Ref.: #40930]	beta-galactosidase	-	3.2.1.23
[Ref.: #40930]	catalase	+	1.11.1.6
[Ref.: #40930]	gelatinase	-
[Ref.: #40930]	lysine decarboxylase	-	4.1.1.18
[Ref.: #40930]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #40930]	oxidase	+
[Ref.: #40930]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #40930]	tryptophan deaminase	-
[Ref.: #40930]	urease	+	3.5.1.5
	Only first 10 entries are displayed. Click here to see all.

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	reductive acetyl coenzyme A pathway	100	7 of 7
[Ref.: #66794]	valine metabolism	100	9 of 9
[Ref.: #66794]	cardiolipin biosynthesis	100	7 of 7
[Ref.: #66794]	suberin monomers biosynthesis	100	2 of 2
[Ref.: #66794]	lactate fermentation	100	4 of 4
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	acetoin degradation	100	3 of 3
[Ref.: #66794]	L-lactaldehyde degradation	100	3 of 3
[Ref.: #66794]	adipate degradation	100	2 of 2
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	formaldehyde oxidation	100	3 of 3
[Ref.: #66794]	molybdenum cofactor biosynthesis	100	9 of 9
[Ref.: #66794]	chorismate metabolism	100	9 of 9
[Ref.: #66794]	butanoate fermentation	100	4 of 4
[Ref.: #66794]	aerobactin biosynthesis	100	1 of 1
[Ref.: #66794]	4-hydroxymandelate degradation	100	9 of 9
[Ref.: #66794]	ppGpp biosynthesis	100	4 of 4
[Ref.: #66794]	threonine metabolism	100	10 of 10
[Ref.: #66794]	palmitate biosynthesis	100	22 of 22
[Ref.: #66794]	ethanol fermentation	100	2 of 2
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	methylglyoxal degradation	100	5 of 5
[Ref.: #66794]	aspartate and asparagine metabolism	100	9 of 9
[Ref.: #66794]	gluconeogenesis	100	8 of 8
[Ref.: #66794]	C4 and CAM-carbon fixation	100	8 of 8
[Ref.: #66794]	ceramide biosynthesis	100	1 of 1
[Ref.: #66794]	glutamate and glutamine metabolism	92.86	26 of 28
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	91.67	11 of 12
[Ref.: #66794]	vitamin B6 metabolism	90.91	10 of 11
[Ref.: #66794]	starch degradation	90	9 of 10
[Ref.: #66794]	Entner Doudoroff pathway	90	9 of 10
[Ref.: #66794]	serine metabolism	88.89	8 of 9
[Ref.: #66794]	lipid A biosynthesis	88.89	8 of 9
[Ref.: #66794]	isoleucine metabolism	87.5	7 of 8
[Ref.: #66794]	flavin biosynthesis	86.67	13 of 15
[Ref.: #66794]	photosynthesis	85.71	12 of 14
[Ref.: #66794]	glutathione metabolism	85.71	12 of 14
[Ref.: #66794]	propanol degradation	85.71	6 of 7
[Ref.: #66794]	citric acid cycle	85.71	12 of 14
[Ref.: #66794]	tetrahydrofolate metabolism	85.71	12 of 14
[Ref.: #66794]	vitamin B12 metabolism	85.29	29 of 34
[Ref.: #66794]	purine metabolism	85.11	80 of 94
[Ref.: #66794]	leucine metabolism	84.62	11 of 13
[Ref.: #66794]	phenylalanine metabolism	84.62	11 of 13
[Ref.: #66794]	NAD metabolism	83.33	15 of 18
[Ref.: #66794]	proline metabolism	81.82	9 of 11
[Ref.: #66794]	lipoate biosynthesis	80	4 of 5
[Ref.: #66794]	cellulose degradation	80	4 of 5
[Ref.: #66794]	gallate degradation	80	4 of 5
[Ref.: #66794]	ethylmalonyl-CoA pathway	80	4 of 5
[Ref.: #66794]	pyrimidine metabolism	80	36 of 45
[Ref.: #66794]	peptidoglycan biosynthesis	80	12 of 15
[Ref.: #66794]	3-chlorocatechol degradation	80	4 of 5
[Ref.: #66794]	glycogen metabolism	80	4 of 5
[Ref.: #66794]	histidine metabolism	79.31	23 of 29
[Ref.: #66794]	d-mannose degradation	77.78	7 of 9
[Ref.: #66794]	CO2 fixation in Crenarchaeota	77.78	7 of 9
[Ref.: #66794]	methionine metabolism	76.92	20 of 26
[Ref.: #66794]	vitamin B1 metabolism	76.92	10 of 13
[Ref.: #66794]	degradation of sugar acids	76	19 of 25
[Ref.: #66794]	alanine metabolism	75.86	22 of 29
[Ref.: #66794]	acetate fermentation	75	3 of 4
[Ref.: #66794]	biotin biosynthesis	75	3 of 4
[Ref.: #66794]	glycogen biosynthesis	75	3 of 4
[Ref.: #66794]	degradation of pentoses	75	21 of 28
[Ref.: #66794]	sulfopterin metabolism	75	3 of 4
[Ref.: #66794]	CMP-KDO biosynthesis	75	3 of 4
[Ref.: #66794]	degradation of sugar alcohols	75	12 of 16
[Ref.: #66794]	non-pathway related	73.68	28 of 38
[Ref.: #66794]	metabolism of disaccharids	72.73	8 of 11
[Ref.: #66794]	pentose phosphate pathway	72.73	8 of 11
[Ref.: #66794]	ubiquinone biosynthesis	71.43	5 of 7
[Ref.: #66794]	heme metabolism	71.43	10 of 14
[Ref.: #66794]	tyrosine metabolism	71.43	10 of 14
[Ref.: #66794]	arginine metabolism	70.83	17 of 24
[Ref.: #66794]	propionate fermentation	70	7 of 10
[Ref.: #66794]	phenol degradation	70	14 of 20
[Ref.: #66794]	urea cycle	69.23	9 of 13
[Ref.: #66794]	oxidative phosphorylation	68.13	62 of 91
[Ref.: #66794]	allantoin degradation	66.67	6 of 9
[Ref.: #66794]	acetyl CoA biosynthesis	66.67	2 of 3
[Ref.: #66794]	glycolate and glyoxylate degradation	66.67	4 of 6
[Ref.: #66794]	enterobactin biosynthesis	66.67	2 of 3
[Ref.: #66794]	IAA biosynthesis	66.67	2 of 3
[Ref.: #66794]	cyanate degradation	66.67	2 of 3
[Ref.: #66794]	cysteine metabolism	66.67	12 of 18
[Ref.: #66794]	tryptophan metabolism	65.79	25 of 38
[Ref.: #66794]	glycolysis	64.71	11 of 17
[Ref.: #66794]	lipid metabolism	64.52	20 of 31
[Ref.: #66794]	dTDPLrhamnose biosynthesis	62.5	5 of 8
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	62.5	5 of 8
[Ref.: #66794]	ketogluconate metabolism	62.5	5 of 8
[Ref.: #66794]	isoprenoid biosynthesis	61.54	16 of 26
[Ref.: #66794]	creatinine degradation	60	3 of 5
[Ref.: #66794]	hydrogen production	60	3 of 5
[Ref.: #66794]	lysine metabolism	59.52	25 of 42
[Ref.: #66794]	aclacinomycin biosynthesis	57.14	4 of 7
[Ref.: #66794]	sulfate reduction	53.85	7 of 13
[Ref.: #66794]	phosphatidylethanolamine bioynthesis	53.85	7 of 13
[Ref.: #66794]	3-phenylpropionate degradation	53.33	8 of 15
[Ref.: #66794]	ribulose monophosphate pathway	50	1 of 2
[Ref.: #66794]	aminopropanol phosphate biosynthesis	50	1 of 2
[Ref.: #66794]	toluene degradation	50	2 of 4
[Ref.: #66794]	cyclohexanol degradation	50	2 of 4
[Ref.: #66794]	mannosylglycerate biosynthesis	50	1 of 2
[Ref.: #66794]	ascorbate metabolism	50	11 of 22
[Ref.: #66794]	carnitine metabolism	50	4 of 8
[Ref.: #66794]	myo-inositol biosynthesis	50	5 of 10
[Ref.: #66794]	selenocysteine biosynthesis	50	3 of 6
[Ref.: #66794]	quinate degradation	50	1 of 2
[Ref.: #66794]	resorcinol degradation	50	1 of 2
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	glycine metabolism	50	5 of 10
[Ref.: #66794]	d-xylose degradation	45.45	5 of 11
[Ref.: #66794]	nitrate assimilation	44.44	4 of 9
[Ref.: #66794]	degradation of hexoses	44.44	8 of 18
[Ref.: #66794]	benzoyl-CoA degradation	42.86	3 of 7
[Ref.: #66794]	D-cycloserine biosynthesis	40	2 of 5
[Ref.: #66794]	4-hydroxyphenylacetate degradation	40	4 of 10
[Ref.: #66794]	coenzyme M biosynthesis	40	4 of 10
[Ref.: #66794]	factor 420 biosynthesis	40	2 of 5
[Ref.: #66794]	glycine betaine biosynthesis	40	2 of 5
[Ref.: #66794]	phenylacetate degradation (aerobic)	40	2 of 5
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	arachidonic acid metabolism	38.89	7 of 18
[Ref.: #66794]	polyamine pathway	34.78	8 of 23
[Ref.: #66794]	octane oxidation	33.33	1 of 3
[Ref.: #66794]	sphingosine metabolism	33.33	2 of 6
[Ref.: #66794]	pantothenate biosynthesis	33.33	2 of 6
[Ref.: #66794]	(5R)-carbapenem carboxylate biosynthesis	33.33	1 of 3
[Ref.: #66794]	sulfoquinovose degradation	33.33	1 of 3
[Ref.: #66794]	androgen and estrogen metabolism	31.25	5 of 16
[Ref.: #66794]	cholesterol biosynthesis	27.27	3 of 11
[Ref.: #66794]	alginate biosynthesis	25	1 of 4
[Ref.: #66794]	bile acid biosynthesis, neutral pathway	23.53	4 of 17
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #51315]	Sample type/isolated from	Human cervix
[Ref.: #51315]	Sampling date	1980
[Ref.: #51315]	Geographic location (country and/or sea, region)	NJ,Newark
[Ref.: #51315]	Country	USA
[Ref.: #51315]	Country ISO 3 Code	USA
[Ref.: #51315]	Continent	North America

[Ref.: #40930]	Sample type/isolated from	Woman, cervix
[Ref.: #40930]	Geographic location (country and/or sea, region)	New Jersey
[Ref.: #40930]	Country	United States of America
[Ref.: #40930]	Country ISO 3 Code	USA
[Ref.: #40930]	Continent	North America
[Ref.: #40930]	Isolation date	1980

[Ref.: #40930]	Geographic location (country and/or sea, region)	NJ
[Ref.: #40930]	Country	USA
[Ref.: #40930]	Country ISO 3 Code	USA
[Ref.: #40930]	Continent	North America
* marker position based on {}

Isolation sources categories

#Host	#Human	#Female
#Host Body-Site	#Urogenital tract	-
#Infection	#Patient	-

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #40930]

Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Pseudoroseomonas cervicalis ATCC 49957	GCA_000164635	scaffold	GenBank	525371 tax ID	*
[Ref.: #66792]	Roseomonas cervicalis ATCC 49957	525371.3	wgs	PATRIC	525371 tax ID	*
[Ref.: #66792]	Roseomonas cervicalis ATCC 49957	2513237333	draft	JGI IMG/M	525371 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Roseomonas cervicalis ATCC 49957 ATCC 49957 NCBI: GCA_000164635.1
[Ref.: #69481]	spore-forming	yes	96	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Roseomonas cervicalis ATCC 49957 ATCC 49957 NCBI: GCA_000164635.1
[Ref.: #69480]	motile	yes	72.558	no
[Ref.: #69480]	flagellated	no	83.756	no
[Ref.: #69480]	gram-positive	no	98.326	no
[Ref.: #69480]	anaerobic	no	97.698	no
[Ref.: #69480]	aerobic	yes	92.613	no
[Ref.: #69480]	halophile	no	84.768	no
[Ref.: #69480]	spore-forming	no	93.308	no
[Ref.: #69480]	thermophile	no	95.781	yes
[Ref.: #69480]	glucose-util	yes	89.343	no
[Ref.: #69480]	glucose-ferment	no	87.398	no

Availability in culture collections External links

[Ref.: #40930]

Culture collection no.

CIP 104027, ATCC 49957, CCM 4881, CCUG 33006

[Ref.: #95556]	SI-ID 42779	*
[Ref.: #95557]	SI-ID 56714	*

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Roseomonas hibiscisoli sp. nov., isolated from the rhizosphere of Mugunghwa (Hibiscus syriacus).	Yan ZF, Lin P, Li CT, Kook M, Wang QJ, Yi TH	Int J Syst Evol Microbiol	10.1099/ijsem.0.002036	2017	*
Metabolism	Characterization of Roseomonas and Nocardioides spp. for arsenic transformation.	Bagade AV, Bachate SP, Dholakia BB, Giri AP, Kodam KM	J Hazard Mater	10.1016/j.jhazmat.2016.07.062	2016	*
Phylogeny	Roseomonas aestuarii sp. nov., a bacteriochlorophyll-a containing alphaproteobacterium isolated from an estuarine habitat of India.	Venkata Ramana V, Sasikala Ch, Takaichi S, Ramana ChV	Syst Appl Microbiol	10.1016/j.syapm.2009.09.004	2009	*
Phylogeny	Transfer of Teichococcus ludipueritiae and Muricoccus roseus to the genus Roseomonas, as Roseomonas ludipueritiae comb. nov. and Roseomonas rosea comb. nov., respectively, and emended description of the genus Roseomonas.	Sanchez-Porro C, Gallego V, Busse HJ, Kampfer P, Ventosa A	Int J Syst Evol Microbiol	10.1099/ijs.0.004820-0	2009	*
Phylogeny	Roseomonas oryzae sp. nov., isolated from paddy rhizosphere soil.	Ramaprasad EVV, Sasikala C, Ramana CV	Int J Syst Evol Microbiol	10.1099/ijsem.0.000449	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#40930 Collection of Institut Pasteur ; Curators of the CIP; CIP 104027
#51315 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 33006

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#95556

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID42779.1 )

#95557

* These data were automatically processed and therefore are not curated

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Roseomonas cervicalis ATCC 49957 ATCC 49957

Roseomonas cervicalis ATCC 49957 ATCC 49957

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