Sulfitobacter donghicola DSW-25 is an aerobe, mesophilic, Gram-negative prokaryote that was isolated from seawater.
Gram-negative aerobe mesophilic genome sequence 16S sequence| @ref 20215 |
|
|
| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Alphaproteobacteria |
| Order Rhodobacterales |
| Family Roseobacteraceae |
| Genus Sulfitobacter |
| Species Sulfitobacter donghicola |
| Full scientific name Sulfitobacter donghicola Yoon et al. 2007 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 17285 | BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) | Medium recipe at MediaDive | Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125438 | 92.201 |
| 67770 | Observationquinones: Q-10 |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | reductive acetyl coenzyme A pathway | 100 | 7 of 7 | ||
| 66794 | gluconeogenesis | 100 | 8 of 8 | ||
| 66794 | C4 and CAM-carbon fixation | 100 | 8 of 8 | ||
| 66794 | Entner Doudoroff pathway | 100 | 10 of 10 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | ||
| 66794 | octane oxidation | 100 | 3 of 3 | ||
| 66794 | CMP-KDO biosynthesis | 100 | 4 of 4 | ||
| 66794 | adipate degradation | 100 | 2 of 2 | ||
| 66794 | phenylacetate degradation (aerobic) | 100 | 5 of 5 | ||
| 66794 | glycolate and glyoxylate degradation | 100 | 6 of 6 | ||
| 66794 | valine metabolism | 100 | 9 of 9 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | L-lactaldehyde degradation | 100 | 3 of 3 | ||
| 66794 | teichoic acid biosynthesis | 100 | 1 of 1 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | ||
| 66794 | ethanol fermentation | 100 | 2 of 2 | ||
| 66794 | threonine metabolism | 90 | 9 of 10 | ||
| 66794 | serine metabolism | 88.89 | 8 of 9 | ||
| 66794 | lipid A biosynthesis | 88.89 | 8 of 9 | ||
| 66794 | chorismate metabolism | 88.89 | 8 of 9 | ||
| 66794 | molybdenum cofactor biosynthesis | 88.89 | 8 of 9 | ||
| 66794 | allantoin degradation | 88.89 | 8 of 9 | ||
| 66794 | phenylalanine metabolism | 84.62 | 11 of 13 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 83.33 | 10 of 12 | ||
| 66794 | vitamin B12 metabolism | 82.35 | 28 of 34 | ||
| 66794 | pentose phosphate pathway | 81.82 | 9 of 11 | ||
| 66794 | peptidoglycan biosynthesis | 80 | 12 of 15 | ||
| 66794 | ethylmalonyl-CoA pathway | 80 | 4 of 5 | ||
| 66794 | methylglyoxal degradation | 80 | 4 of 5 | ||
| 66794 | alanine metabolism | 79.31 | 23 of 29 | ||
| 66794 | glutathione metabolism | 78.57 | 11 of 14 | ||
| 66794 | photosynthesis | 78.57 | 11 of 14 | ||
| 66794 | citric acid cycle | 78.57 | 11 of 14 | ||
| 66794 | CO2 fixation in Crenarchaeota | 77.78 | 7 of 9 | ||
| 66794 | purine metabolism | 77.66 | 73 of 94 | ||
| 66794 | leucine metabolism | 76.92 | 10 of 13 | ||
| 66794 | pyrimidine metabolism | 75.56 | 34 of 45 | ||
| 66794 | lactate fermentation | 75 | 3 of 4 | ||
| 66794 | isoleucine metabolism | 75 | 6 of 8 | ||
| 66794 | carnitine metabolism | 75 | 6 of 8 | ||
| 66794 | butanoate fermentation | 75 | 3 of 4 | ||
| 66794 | glutamate and glutamine metabolism | 75 | 21 of 28 | ||
| 66794 | proline metabolism | 72.73 | 8 of 11 | ||
| 66794 | NAD metabolism | 72.22 | 13 of 18 | ||
| 66794 | ubiquinone biosynthesis | 71.43 | 5 of 7 | ||
| 66794 | heme metabolism | 71.43 | 10 of 14 | ||
| 66794 | tryptophan metabolism | 71.05 | 27 of 38 | ||
| 66794 | arginine metabolism | 70.83 | 17 of 24 | ||
| 66794 | glycolysis | 70.59 | 12 of 17 | ||
| 66794 | propionate fermentation | 70 | 7 of 10 | ||
| 66794 | urea cycle | 69.23 | 9 of 13 | ||
| 66794 | methionine metabolism | 69.23 | 18 of 26 | ||
| 66794 | 4-hydroxymandelate degradation | 66.67 | 6 of 9 | ||
| 66794 | acetoin degradation | 66.67 | 2 of 3 | ||
| 66794 | IAA biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | lysine metabolism | 66.67 | 28 of 42 | ||
| 66794 | d-mannose degradation | 66.67 | 6 of 9 | ||
| 66794 | aspartate and asparagine metabolism | 66.67 | 6 of 9 | ||
| 66794 | methane metabolism | 66.67 | 2 of 3 | ||
| 66794 | tetrahydrofolate metabolism | 64.29 | 9 of 14 | ||
| 66794 | tyrosine metabolism | 64.29 | 9 of 14 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | degradation of sugar alcohols | 62.5 | 10 of 16 | ||
| 66794 | isoprenoid biosynthesis | 61.54 | 16 of 26 | ||
| 66794 | oxidative phosphorylation | 61.54 | 56 of 91 | ||
| 66794 | cysteine metabolism | 61.11 | 11 of 18 | ||
| 66794 | non-pathway related | 60.53 | 23 of 38 | ||
| 66794 | glycine metabolism | 60 | 6 of 10 | ||
| 66794 | coenzyme M biosynthesis | 60 | 6 of 10 | ||
| 66794 | flavin biosynthesis | 60 | 9 of 15 | ||
| 66794 | hydrogen production | 60 | 3 of 5 | ||
| 66794 | histidine metabolism | 58.62 | 17 of 29 | ||
| 66794 | propanol degradation | 57.14 | 4 of 7 | ||
| 66794 | phenol degradation | 55 | 11 of 20 | ||
| 66794 | lipid metabolism | 54.84 | 17 of 31 | ||
| 66794 | vitamin B6 metabolism | 54.55 | 6 of 11 | ||
| 66794 | sulfate reduction | 53.85 | 7 of 13 | ||
| 66794 | dTDPLrhamnose biosynthesis | 50 | 4 of 8 | ||
| 66794 | cyclohexanol degradation | 50 | 2 of 4 | ||
| 66794 | pantothenate biosynthesis | 50 | 3 of 6 | ||
| 66794 | aminopropanol phosphate biosynthesis | 50 | 1 of 2 | ||
| 66794 | selenocysteine biosynthesis | 50 | 3 of 6 | ||
| 66794 | toluene degradation | 50 | 2 of 4 | ||
| 66794 | biotin biosynthesis | 50 | 2 of 4 | ||
| 66794 | phenylmercury acetate degradation | 50 | 1 of 2 | ||
| 66794 | mannosylglycerate biosynthesis | 50 | 1 of 2 | ||
| 66794 | acetate fermentation | 50 | 2 of 4 | ||
| 66794 | sulfopterin metabolism | 50 | 2 of 4 | ||
| 66794 | bile acid biosynthesis, neutral pathway | 47.06 | 8 of 17 | ||
| 66794 | 3-phenylpropionate degradation | 46.67 | 7 of 15 | ||
| 66794 | phosphatidylethanolamine bioynthesis | 46.15 | 6 of 13 | ||
| 66794 | vitamin B1 metabolism | 46.15 | 6 of 13 | ||
| 66794 | nitrate assimilation | 44.44 | 4 of 9 | ||
| 66794 | arachidonic acid metabolism | 44.44 | 8 of 18 | ||
| 66794 | benzoyl-CoA degradation | 42.86 | 3 of 7 | ||
| 66794 | degradation of pentoses | 42.86 | 12 of 28 | ||
| 66794 | cardiolipin biosynthesis | 42.86 | 3 of 7 | ||
| 66794 | ascorbate metabolism | 40.91 | 9 of 22 | ||
| 66794 | metabolism of amino sugars and derivatives | 40 | 2 of 5 | ||
| 66794 | vitamin K metabolism | 40 | 2 of 5 | ||
| 66794 | factor 420 biosynthesis | 40 | 2 of 5 | ||
| 66794 | creatinine degradation | 40 | 2 of 5 | ||
| 66794 | arachidonate biosynthesis | 40 | 2 of 5 | ||
| 66794 | degradation of sugar acids | 40 | 10 of 25 | ||
| 66794 | lipoate biosynthesis | 40 | 2 of 5 | ||
| 66794 | ketogluconate metabolism | 37.5 | 3 of 8 | ||
| 66794 | d-xylose degradation | 36.36 | 4 of 11 | ||
| 66794 | metabolism of disaccharids | 36.36 | 4 of 11 | ||
| 66794 | cyanate degradation | 33.33 | 1 of 3 | ||
| 66794 | acetyl CoA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | degradation of hexoses | 33.33 | 6 of 18 | ||
| 66794 | sulfoquinovose degradation | 33.33 | 1 of 3 | ||
| 66794 | sphingosine metabolism | 33.33 | 2 of 6 | ||
| 66794 | (5R)-carbapenem carboxylate biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | androgen and estrogen metabolism | 31.25 | 5 of 16 | ||
| 66794 | mevalonate metabolism | 28.57 | 2 of 7 | ||
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 27.27 | 3 of 11 | ||
| 66794 | catecholamine biosynthesis | 25 | 1 of 4 | ||
| 66794 | alginate biosynthesis | 25 | 1 of 4 | ||
| 66794 | glycogen biosynthesis | 25 | 1 of 4 | ||
| 66794 | polyamine pathway | 21.74 | 5 of 23 |
Global distribution of 16S sequence EF202614 (>99% sequence identity) for Sulfitobacter donghicola from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 67770 | 12864_draft assembly for Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565 | contig | 1300350 | 72.08 | ||||
| 67770 | SOAPdenovo v1.05 assembly for Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565 | contig | 1300350 | 55.4 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 17285 | Sulfitobacter donghicola strain DSW-25 16S ribosomal RNA gene, partial sequence | EF202614 | 1418 | 1300350 |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 17285 | 56.9 | high performance liquid chromatography (HPLC) |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 76.90 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 71.00 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 85.60 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | aerobe | 93.50 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 98.00 | yes |
| 125438 | anaerobic | anaerobicⓘ | no | 91.04 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 92.20 | no |
| 125438 | aerobic | aerobicⓘ | yes | 81.47 | yes |
| 125438 | thermophilic | thermophileⓘ | no | 95.15 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 60.21 | no |
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| Genetics | Identification and analysis of a clinically isolated strain of Halomonas based on whole-genome sequencing and comparative genomics. | Wang P, Xie C. | Lab Med | 10.1093/labmed/lmad040 | 2024 | |
| Genetics | Complete genome sequence of Dorea formicigenerans JCM 31256. | Tourlousse DM, Murotomi K, Hamajima M, Sekiguchi Y. | Microbiol Resour Announc | 10.1128/mra.01254-24 | 2025 | |
| Deep learning-guided structural analysis of a novel bacteriophage KPP105 against multidrug-resistant Klebsiella pneumoniae | Ko S, Kim J, Cho J, Kim Y, Kim D. | Comput Struct Biotechnol J | 2025 | |||
| Draft Genome Sequences of Longimonas halophila KCTC 42399 and Longibacter salinarum KCTC 52045. | Liew KJ, Teo SC, Shamsir MS, Goh KM. | Microbiol Resour Announc | 10.1128/mra.01238-19 | 2019 | ||
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| Colonization of Raphanus sativus by human pathogenic microorganisms. | Szymanska S, Deja-Sikora E, Sikora M, Niedojadlo K, Mazur J, Hrynkiewicz K. | Front Microbiol | 10.3389/fmicb.2024.1296372 | 2024 | ||
| Genome Sequence and Characterization of a Xanthorhodopsin-Containing, Aerobic Anoxygenic Phototrophic Rhodobacter Species, Isolated from Mesophilic Conditions at Yellowstone National Park. | Kyndt JA, Robertson S, Shoffstall IB, Ramaley RF, Meyer TE. | Microorganisms | 10.3390/microorganisms10061169 | 2022 | ||
| Lactobacillus reuteri MJM60668 Prevent Progression of Non-Alcoholic Fatty Liver Disease through Anti-Adipogenesis and Anti-inflammatory Pathway. | Werlinger P, Nguyen HT, Gu M, Cho JH, Cheng J, Suh JW. | Microorganisms | 10.3390/microorganisms10112203 | 2022 | ||
| Antimicrobial Effects of Plant-Based Supplements on Gut Microbial Diversity in Small Ruminants. | Daniel IK, Njue OM, Sanad YM. | Pathogens | 10.3390/pathogens13010031 | 2023 | ||
| Characterization of Klebsiella pneumoniae bacteriophages, KP1 and KP12, with deep learning-based structure prediction. | Kim Y, Lee SM, Nong LK, Kim J, Kim SB, Kim D. | Front Microbiol | 10.3389/fmicb.2022.990910 | 2022 | ||
| The Histidine Biosynthetic Genes in the Superphylum Bacteroidota-Rhodothermota-Balneolota-Chlorobiota: Insights into the Evolution of Gene Structure and Organization. | Del Duca S, Riccardi C, Vassallo A, Fontana G, Castronovo LM, Chioccioli S, Fani R. | Microorganisms | 10.3390/microorganisms9071439 | 2021 | ||
| Genetics | Genomic and Chemical Decryption of the Bacteroidetes Phylum for Its Potential to Biosynthesize Natural Products. | Brinkmann S, Kurz M, Patras MA, Hartwig C, Marner M, Leis B, Billion A, Kleiner Y, Bauer A, Toti L, Poverlein C, Hammann PE, Vilcinskas A, Glaeser J, Spohn M, Schaberle TF. | Microbiol Spectr | 10.1128/spectrum.02479-21 | 2022 | |
| Dysbiotic oral microbiota and infected salivary glands in Sjögren's syndrome. | Alam J, Lee A, Lee J, Kwon DI, Park HK, Park JH, Jeon S, Baek K, Lee J, Park SH, Choi Y. | PLoS One | 10.1371/journal.pone.0230667 | 2020 | ||
| Isolation and characterization of Polaribacter sargassicola sp. nov. and Algibacter ulvanivorans sp. nov.: two novel species with ability to degrade algal polysaccharides. | Li J, Mao A, Peng C, Li L, Li B, Zhou L, Xu Y, Zhong M, Hu Z. | Antonie Van Leeuwenhoek | 10.1007/s10482-025-02117-5 | 2025 | ||
| Sphingomicrobium clamense sp. nov., Isolated from Sediment of Clam Island Beach in China. | Li X, Mu L, Zhang Y, Zhu Z, Xiao Y, Fang Z. | Curr Microbiol | 10.1007/s00284-024-03639-3 | 2024 | ||
| Lysobacter lactosilyticus sp. nov., a Novel beta-Galactosidase Producing Bacterial Strain Isolated from Farmland Soil Applied with Amino Acid Fertilizer. | Wang X, Wang YH, Yang HX, Chuang SC, Zhou CF, Yu X, Zhang H. | Curr Microbiol | 10.1007/s00284-022-03155-2 | 2022 | ||
| Phylogeny | Gymnodinialimonas ceratoperidinii gen. nov., sp. nov., isolated from rare marine dinoflagellate Ceratoperidinium margalefii. | Jiang Y, Peng Y, Shin HH, Kim HJ, Kim KH, Jiang L, Lee J, Li Z. | Arch Microbiol | 10.1007/s00203-022-02797-x | 2022 | |
| Sphingomonas xanthus sp. nov., Isolated from Beach Soil. | Kim H, Chhetri G, Seo T. | Curr Microbiol | 10.1007/s00284-020-02273-z | 2021 | ||
| Phylogeny | Halioglobus sediminis sp. nov., isolated from coastal sediment. | Han JR, Ye MQ, Wang C, Du ZJ. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.003366 | 2019 | |
| Genetics | Alteromonas nitratireducens sp. nov., a Novel Nitrate-Reducing Bacterium Isolated from Marine Sediments, and the Evolution of Nitrate-Reducing Genes in the Genus Alteromonas | Chang Y, Li J, Wang X, Li Y, Cao Y, Duan X, Sun C, Chen C, Xu L. | Microorganisms | 2025 | ||
| Enzymology | Winogradskyella algae sp. nov., a marine bacterium isolated from the brown alga. | Kurilenko VV, Romanenko LA, Isaeva MP, Svetashev VI, Mikhailov VV. | Antonie Van Leeuwenhoek | 10.1007/s10482-018-1207-5 | 2019 | |
| Phylogeny | Duganella rivus sp. nov., Duganella fentianensis sp. nov., Duganella qianjiadongensis sp. nov. and Massilia guangdongensis sp. nov., isolated from subtropical streams in China and reclassification of all species within genus Pseudoduganella. | Lu HB, Cai ZP, Yang YG, Xu MY. | Antonie Van Leeuwenhoek | 10.1007/s10482-020-01422-5 | 2020 | |
| Phylogeny | Lysobacter pedocola sp. nov., a novel species isolated from Korean soil. | Jang JH, Lee D, Seo T. | J Microbiol | 10.1007/s12275-018-8046-y | 2018 | |
| Phylogeny | Lysobacter tabacisoli sp. nov., isolated from rhizosphere soil of Nicotiana tabacum L. | Xiao M, Zhou XK, Chen X, Duan YQ, Alkhalifah DHM, Im WT, Hozzein WN, Chen W, Li WJ. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.003164 | 2019 | |
| Phylogeny | Sphingobium aquiterrae sp. nov., a toluene, meta- and para-xylene-degrading bacterium isolated from petroleum hydrocarbon-contaminated groundwater. | Revesz F, Toth EM, Kriszt B, Boka K, Benedek T, Sarkany O, Nagy Z, Tancsics A. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.002898 | 2018 | |
| Phylogeny | Nocardioides pelophilus sp. nov., isolated from freshwater mud. | Yan ZF, Lin P, Li CT, Kook M, Yi TH. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.002776 | 2018 | |
| Phylogeny | Ornithinibacillus salinisoli sp. nov., a moderately halophilic bacterium isolated from a saline-alkali soil. | Gan L, Zhang H, Long X, Tian J, Wang Z, Zhang Y, Dai Y, Tian Y. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.002580 | 2018 | |
| Phylogeny | Flavisolibacter metallilatus sp. nov., isolated from an automotive air conditioning system and emended description of the genus Flavisolibacter. | Kim DU, Lee H, Lee S, Kim SG, Park AY, Ahn JH, Ka JO. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.002609 | 2018 | |
| Phylogeny | Lysobacter humi sp. nov., a bacterium isolated from rice field. | Akter S, Huq MA, Yi TH. | Arch Microbiol | 10.1007/s00203-016-1262-0 | 2016 | |
| Phylogeny | Lysobacter pocheonensis sp. nov., isolated from soil of a ginseng field. | Siddiqi MZ, Im WT. | Arch Microbiol | 10.1007/s00203-016-1214-8 | 2016 | |
| Phylogeny | Lysobacter tyrosinelyticus sp. nov. isolated from Gyeryongsan national park soil. | Du J, Singh H, Ngo HT, Won K, Kim KY, Yi TH. | J Microbiol | 10.1007/s12275-015-4729-9 | 2015 | |
| Phylogeny | Lysobacter agri sp. nov., a bacterium isolated from soil. | Singh H, Won K, Du J, Yang JE, Akter S, Kim KY, Yi TH. | Antonie Van Leeuwenhoek | 10.1007/s10482-015-0510-7 | 2015 | |
| Enzymology | Pedobacter edaphicus sp. nov. isolated from forest soil in South Korea. | Singh H, Du J, Ngo HT, Won KH, Kim KY, Yi TH. | Arch Microbiol | 10.1007/s00203-015-1114-3 | 2015 | |
| Phylogeny | Nocardioides albidus sp. nov., an actinobacterium isolated from garden soil. | Singh H, Du J, Trinh H, Won K, Yang JE, Yin C, Kook M, Yi TH. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.000730 | 2016 | |
| Phylogeny | Lysobacter fragariae sp. nov. and Lysobacter rhizosphaerae sp. nov. isolated from rhizosphere of strawberry plant. | Singh H, Du J, Ngo HT, Won K, Yang JE, Kim KY, Yi TH. | Antonie Van Leeuwenhoek | 10.1007/s10482-015-0439-x | 2015 | |
| Phylogeny | Peptoniphilus mikwangii sp. nov., isolated from a clinical specimen of human origin. | Cho E, Park SN, Shin Y, Lim YK, Paek J, Kim HK, Hwang CH, Jo E, Jin D, Chang YH, Kook JK. | Curr Microbiol | 10.1007/s00284-014-0712-7 | 2015 | |
| Phylogeny | Lysobacter lycopersici sp. nov., isolated from tomato plant Solanum lycopersicum. | Lin SY, Hameed A, Wen CZ, Liu YC, Hsu YH, Lai WA, Young CC. | Antonie Van Leeuwenhoek | 10.1007/s10482-015-0419-1 | 2015 | |
| Phylogeny | Paramixta manurensis gen. nov., sp. nov., a novel member of the family Erwiniaceae producing indole-3-acetic acid isolated from mushroom compost. | Kim J, Yun H, Tahmasebi A, Nam J, Pham H, Kim YH, Min HJ, Lee CW. | Sci Rep | 10.1038/s41598-024-65803-w | 2024 | |
| Phylogeny | Pedobacter hainanensis sp. nov., isolated from seaside soil. | Meng YY, Fu YB, Wang MY, Zhao Y, Liu QS, Du YG. | Curr Microbiol | 10.1007/s00284-013-0305-x | 2013 | |
| Phylogeny | Sphingopyxis italica sp. nov., isolated from Roman catacombs. | Alias-Villegas C, Jurado V, Laiz L, Saiz-Jimenez C. | Int J Syst Evol Microbiol | 10.1099/ijs.0.046573-0 | 2013 | |
| Phylogeny | Flavobacterium aquaticum sp. nov., isolated from a water sample of a rice field. | Subhash Y, Sasikala C, Ramana CV. | Int J Syst Evol Microbiol | 10.1099/ijs.0.050047-0 | 2013 | |
| Phylogeny | Polaribacter sejongensis sp. nov., isolated from Antarctic soil, and emended descriptions of the genus Polaribacter, Polaribacter butkevichii and Polaribacter irgensii. | Kim BC, Oh HW, Kim H, Park DS, Hong SG, Lee HK, Bae KS. | Int J Syst Evol Microbiol | 10.1099/ijs.0.047100-0 | 2013 | |
| Phylogeny | Halosquirtibacter laminarini gen. nov., sp. nov. and Halosquirtibacter xylanolyticus sp. nov., marine anaerobic laminarin and xylan degraders in the phylum Bacteroidota. | Nguyen TTH, Vuong TQ, Han HL, Kim SG. | Sci Rep | 10.1038/s41598-024-74787-6 | 2024 | |
| Metabolism | Polycyclic aromatic hydrocarbon degradation of phytoplankton-associated Arenibacter spp. and description of Arenibacter algicola sp. nov., an aromatic hydrocarbon-degrading bacterium. | Gutierrez T, Rhodes G, Mishamandani S, Berry D, Whitman WB, Nichols PD, Semple KT, Aitken MD. | Appl Environ Microbiol | 10.1128/aem.03104-13 | 2014 | |
| Phylogeny | Sulfitobacter pseudonitzschiae sp. nov., isolated from the toxic marine diatom Pseudo-nitzschia multiseries. | Hong Z, Lai Q, Luo Q, Jiang S, Zhu R, Liang J, Gao Y | Int J Syst Evol Microbiol | 10.1099/ijs.0.064972-0 | 2014 | |
| Phylogeny | Description of Sulfitobacter donghicola sp. nov., isolated from seawater of the East Sea in Korea, transfer of Staleya guttiformis Labrenz et al. 2000 to the genus Sulfitobacter as Sulfitobacter guttiformis comb. nov. and emended description of the genus Sulfitobacter. | Yoon JH, Kang SJ, Lee MH, Oh TK | Int J Syst Evol Microbiol | 10.1099/ijs.0.65071-0 | 2007 | |
| Phylogeny | Sulfitobacter albidus sp. nov., isolated from marine sediment of Jeju Island. | Kim M, Cha IT, Lee KE, Park SJ | Arch Microbiol | 10.1007/s00203-022-03305-x | 2022 |
| #17285 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23563 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #67771 | Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC; |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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If you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive13800.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data