Roseovarius mucosus (DSM 17069, NCIMB 14077, DFL 24)

Name: Roseovarius mucosus (DSM 17069, NCIMB 14077, DFL 24)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 13770

Type strain

Culture col. no. DSM 17069 NCIMB 14077 DFL 24

NCBI tax ID(s) 1288298 215743

Special Collections DSMZ Literature strains

History DSMZ <- H. Biebl; DFL 24 <- M. Allgaier

Links

Roseovarius mucosus DSM 17069 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from culture of Alexandrium ostenfeldii KO287.

Gram-negative rod-shaped aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 281465

DSM 17069,NCIMB 14077,CECT 7973

@ref 20215

Last LPSN update 2026-05-29 08:28:07

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodobacterales

Family Roseobacteraceae

Genus Roseovarius

Species Roseovarius mucosus

Full scientific name Roseovarius mucosus Biebl et al. 2005

BacDive ID	Other strains from **Roseovarius mucosus** (1)	Type strain
13771	R. mucosus 253-13, DSM 17070

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility	Confidence
31573	negative	2.15 µm	0.6 µm	rod-shaped
125438	negative					98.429

Colony morphology

6736

Incubation period1-2 days

Pigmentation

31573

Productionyes

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
6736	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)		Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
6736	positive	growth	28-30
31573	positive	growth	20-40
31573	positive	optimum	30

Culture pH

@ref	Ability	Type	PH	PH range
31573	positive	optimum	7.4
31573	positive	growth	6-8.8	alkaliphile

Physiology and metabolism

Oxygen tolerance

31573

Oxygen toleranceaerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
31573	NaCl	positive	growth	01-07 %
31573	NaCl	positive	optimum	4 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
31573	30089 ChEBI	acetate	+	carbon source
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	-	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	-	assimilation	from API 20NE
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	-	assimilation	from API 20NE
31573	29987 ChEBI	glutamate	+	carbon source
31573	17754 ChEBI	glycerol	+	carbon source
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
31573	24996 ChEBI	lactate	+	carbon source
31573	25115 ChEBI	malate	+	carbon source
68369	25115 ChEBI	malate	-	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	+	reduction	from API 20NE
31573	15361 ChEBI	pyruvate	+	carbon source
31573	30031 ChEBI	succinate	+	carbon source
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
6736	catalase	+	1.11.1.6
31573	catalase	+	1.11.1.6
31573	cytochrome oxidase	+	1.9.3.1
68369	cytochrome oxidase	-	1.9.3.1	from API 20NE
6736	cytochrome-c oxidase	+	1.9.3.1
31573	gelatinase	+
68369	gelatinase	-		from API 20NE
68369	urease	-	3.5.1.5	from API 20NE

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	denitrification	100	2 of 2
66794	molybdenum cofactor biosynthesis	100	9 of 9
66794	sulfopterin metabolism	100	4 of 4
66794	coenzyme A metabolism	100	4 of 4
66794	formaldehyde oxidation	100	3 of 3
66794	glycine betaine biosynthesis	100	5 of 5
66794	cyanate degradation	100	3 of 3
66794	adipate degradation	100	2 of 2
66794	reductive acetyl coenzyme A pathway	100	7 of 7
66794	hydrogen production	100	5 of 5
66794	CMP-KDO biosynthesis	100	4 of 4
66794	biotin biosynthesis	100	4 of 4
66794	ppGpp biosynthesis	100	4 of 4
66794	allantoin degradation	100	9 of 9
66794	ethylmalonyl-CoA pathway	100	5 of 5
66794	methylglyoxal degradation	100	5 of 5
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	C4 and CAM-carbon fixation	100	8 of 8
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	octane oxidation	100	3 of 3
66794	folate polyglutamylation	100	1 of 1
66794	valine metabolism	100	9 of 9
66794	palmitate biosynthesis	100	22 of 22
66794	lactate fermentation	100	4 of 4
66794	methane metabolism	100	3 of 3
66794	suberin monomers biosynthesis	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	phenylalanine metabolism	92.31	12 of 13
66794	pentose phosphate pathway	90.91	10 of 11
66794	proline metabolism	90.91	10 of 11
66794	threonine metabolism	90	9 of 10
66794	d-mannose degradation	88.89	8 of 9
66794	chorismate metabolism	88.89	8 of 9
66794	serine metabolism	88.89	8 of 9
66794	gluconeogenesis	87.5	7 of 8
66794	vitamin B12 metabolism	85.29	29 of 34
66794	vitamin B1 metabolism	84.62	11 of 13
66794	leucine metabolism	84.62	11 of 13
66794	glycolate and glyoxylate degradation	83.33	5 of 6
66794	degradation of aromatic, nitrogen containing compounds	83.33	10 of 12
66794	alanine metabolism	82.76	24 of 29
66794	purine metabolism	80.85	76 of 94
66794	peptidoglycan biosynthesis	80	12 of 15
66794	lipoate biosynthesis	80	4 of 5
66794	phenylacetate degradation (aerobic)	80	4 of 5
66794	arginine metabolism	79.17	19 of 24
66794	heme metabolism	78.57	11 of 14
66794	tetrahydrofolate metabolism	78.57	11 of 14
66794	glutamate and glutamine metabolism	78.57	22 of 28
66794	photosynthesis	78.57	11 of 14
66794	citric acid cycle	78.57	11 of 14
66794	CO2 fixation in Crenarchaeota	77.78	7 of 9
66794	NAD metabolism	77.78	14 of 18
66794	histidine metabolism	75.86	22 of 29
66794	isoleucine metabolism	75	6 of 8
66794	acetate fermentation	75	3 of 4
66794	glycogen biosynthesis	75	3 of 4
66794	butanoate fermentation	75	3 of 4
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	75	6 of 8
66794	lipid metabolism	74.19	23 of 31
66794	methionine metabolism	73.08	19 of 26
66794	cysteine metabolism	72.22	13 of 18
66794	propanol degradation	71.43	5 of 7
66794	ubiquinone biosynthesis	71.43	5 of 7
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	glutathione metabolism	71.43	10 of 14
66794	pyrimidine metabolism	71.11	32 of 45
66794	sulfate reduction	69.23	9 of 13
66794	degradation of sugar alcohols	68.75	11 of 16
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	flavin biosynthesis	66.67	10 of 15
66794	lysine metabolism	66.67	28 of 42
66794	(5R)-carbapenem carboxylate biosynthesis	66.67	2 of 3
66794	selenocysteine biosynthesis	66.67	4 of 6
66794	IAA biosynthesis	66.67	2 of 3
66794	acetoin degradation	66.67	2 of 3
66794	aspartate and asparagine metabolism	66.67	6 of 9
66794	acetyl CoA biosynthesis	66.67	2 of 3
66794	tryptophan metabolism	65.79	25 of 38
66794	isoprenoid biosynthesis	65.38	17 of 26
66794	phenol degradation	65	13 of 20
66794	oxidative phosphorylation	64.84	59 of 91
66794	vitamin B6 metabolism	63.64	7 of 11
66794	non-pathway related	63.16	24 of 38
66794	ketogluconate metabolism	62.5	5 of 8
66794	urea cycle	61.54	8 of 13
66794	chlorophyll metabolism	61.11	11 of 18
66794	3-chlorocatechol degradation	60	3 of 5
66794	vitamin K metabolism	60	3 of 5
66794	propionate fermentation	60	6 of 10
66794	3-phenylpropionate degradation	60	9 of 15
66794	glycolysis	58.82	10 of 17
66794	tyrosine metabolism	57.14	8 of 14
66794	nitrate assimilation	55.56	5 of 9
66794	pantothenate biosynthesis	50	3 of 6
66794	phenylmercury acetate degradation	50	1 of 2
66794	resorcinol degradation	50	1 of 2
66794	Entner Doudoroff pathway	50	5 of 10
66794	aminopropanol phosphate biosynthesis	50	1 of 2
66794	ribulose monophosphate pathway	50	1 of 2
66794	carnitine metabolism	50	4 of 8
66794	glycine metabolism	50	5 of 10
66794	coenzyme M biosynthesis	50	5 of 10
66794	cyclohexanol degradation	50	2 of 4
66794	dTDPLrhamnose biosynthesis	50	4 of 8
66794	ethanol fermentation	50	1 of 2
66794	polyamine pathway	47.83	11 of 23
66794	arachidonic acid metabolism	44.44	8 of 18
66794	4-hydroxymandelate degradation	44.44	4 of 9
66794	lipid A biosynthesis	44.44	4 of 9
66794	degradation of pentoses	42.86	12 of 28
66794	aclacinomycin biosynthesis	42.86	3 of 7
66794	D-cycloserine biosynthesis	40	2 of 5
66794	creatinine degradation	40	2 of 5
66794	glycogen metabolism	40	2 of 5
66794	factor 420 biosynthesis	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	phosphatidylethanolamine bioynthesis	38.46	5 of 13
66794	androgen and estrogen metabolism	37.5	6 of 16
66794	ascorbate metabolism	36.36	8 of 22
66794	cholesterol biosynthesis	36.36	4 of 11
66794	degradation of hexoses	33.33	6 of 18
66794	sphingosine metabolism	33.33	2 of 6
66794	enterobactin biosynthesis	33.33	1 of 3
66794	degradation of sugar acids	32	8 of 25
66794	myo-inositol biosynthesis	30	3 of 10
66794	bile acid biosynthesis, neutral pathway	29.41	5 of 17
66794	benzoyl-CoA degradation	28.57	2 of 7
66794	mevalonate metabolism	28.57	2 of 7
66794	dolichyl-diphosphooligosaccharide biosynthesis	27.27	3 of 11
66794	d-xylose degradation	27.27	3 of 11
66794	metabolism of disaccharids	27.27	3 of 11
66794	alginate biosynthesis	25	1 of 4
66794	catecholamine biosynthesis	25	1 of 4
66794	toluene degradation	25	1 of 4
66794	methanogenesis from CO2	25	3 of 12
66794	phenylpropanoid biosynthesis	23.08	3 of 13
66794	carotenoid biosynthesis	22.73	5 of 22

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
6736	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Laboratory	#Lab enrichment
#Host	#Protozoa	#Dinoflagellate

Isolation

@ref	Sample type	Host species
6736	culture of Alexandrium ostenfeldii KO287(dinoflagellate)	Alexandrium ostenfeldii

Taxonmaps

69479

Global distribution of 16S sequence AJ534215 (>99% sequence identity) for Roseovarius mucosus subclade from Microbeatlas

Aquatic Samples	756
Soil Samples	109
Animal Samples	49
Plant Samples	5
Total Samples	919

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
6736	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	Roseovarius mucosus DSM 17069	contig		1288298.3		1288298	73.3
66792	Rosmuc_1.1 assembly for Roseovarius mucosus DSM 17069	scaffold	GCA_000768555	1288298.8	2518285587	1288298	72.37

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
6736	Roseovarius mucosus 16S rRNA gene, type strain DFL-24	AJ534215	1323		1288298

GC content

31573

GC-content (mol%)62.9

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Rosmuc_1.1 assembly for Roseovarius mucosus DSM 17069
NCBI: GCA_000768555

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	87.61	no
125439	gram_stain	BacteriaNetⓘ	negative	88.37	no
125439	spore_formation	BacteriaNetⓘ	no	83.28	no
125439	motility	BacteriaNetⓘ	yes	61.54	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Roseovarius mucosus DSM 17069 DSM 17069
NCBI: GCA_000768555.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.43	no
125438	anaerobic	anaerobicⓘ	no	93.62	yes
125438	aerobic	aerobicⓘ	yes	78.10	yes
125438	spore-forming	spore-formingⓘ	no	85.54	no
125438	thermophilic	thermophileⓘ	no	98.55	yes
125438	flagellated	motile2+ⓘ	yes	70.58	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Iron limitation triggers roseoceramide biosynthesis and membrane remodeling in marine roseobacter.	Ganley JG, Seyedsayamdost MR.	Proc Natl Acad Sci U S A	10.1073/pnas.2414434122	2025
	The overlooked role of a biotin precursor for marine bacteria - desthiobiotin as an escape route for biotin auxotrophy.	Wienhausen G, Bruns S, Sultana S, Dlugosch L, Groon LA, Wilkes H, Simon M.	ISME J	10.1038/s41396-022-01304-w	2022
	Vitamin B₁₂ is not shared by all marine prototrophic bacteria with their environment.	Sultana S, Bruns S, Wilkes H, Simon M, Wienhausen G.	ISME J	10.1038/s41396-023-01391-3	2023
Metabolism	Isotopically labeled sulfur compounds and synthetic selenium and tellurium analogues to study sulfur metabolism in marine bacteria.	Brock NL, Citron CA, Zell C, Berger M, Wagner-Dobler I, Petersen J, Brinkhoff T, Simon M, Dickschat JS.	Beilstein J Org Chem	10.3762/bjoc.9.108	2013
Genetics	Ecological Genomics of the Uncultivated Marine Roseobacter Lineage CHAB-I-5.	Zhang Y, Sun Y, Jiao N, Stepanauskas R, Luo H.	Appl Environ Microbiol	10.1128/aem.03678-15	2016
Genetics	Long-Read Sequencing Unlocks New Insights into the Amphidinium carterae Microbiome.	Judd M, Wira J, Place AR, Bachvaroff T.	Mar Drugs	10.3390/md22080342	2024
	Genome Sequence of Roseovarius sp. Strain MCTG156(2b) Isolated from a Phytoplankton Net Trawl on the Scottish West Coast.	Gutierrez T, Whitman WB, Huntemann M, Copeland A, Chen A, Vargese N, Kyrpides NC, Pillay M, Ivanova N, Mikhailova N, Mukherjee S, Stamatis D, Reddy TBK, Ngan CY, Chovatia M, Daum C, Shapiro N, Woyke T.	Genome Announc	10.1128/genomea.00837-17	2017
Genetics	Draft Genome Sequence of Roseovarius sp. A-2, an Iodide-Oxidizing Bacterium Isolated from Natural Gas Brine Water, Chiba, Japan.	Yuliana T, Nakajima N, Yamamura S, Tomita M, Suzuki H, Amachi S.	J Genomics	10.7150/jgen.19846	2017
	Friends With Benefits: Exploring the Phycosphere of the Marine Diatom Skeletonema marinoi.	Johansson ON, Pinder MIM, Ohlsson F, Egardt J, Topel M, Clarke AK.	Front Microbiol	10.3389/fmicb.2019.01828	2019
Metabolism	Biofilm plasmids with a rhamnose operon are widely distributed determinants of the 'swim-or-stick' lifestyle in roseobacters.	Michael V, Frank O, Bartling P, Scheuner C, Goker M, Brinkmann H, Petersen J.	ISME J	10.1038/ismej.2016.30	2016
	Study of Bacterial Community Composition and Correlation of Environmental Variables in Rambla Salada, a Hypersaline Environment in South-Eastern Spain.	Oueriaghli N, Castro DJ, Llamas I, Bejar V, Martinez-Checa F.	Front Microbiol	10.3389/fmicb.2018.01377	2018
Metabolism	Ubiquitous dissolved inorganic carbon assimilation by marine bacteria in the Pacific Northwest coastal ocean as determined by stable isotope probing.	DeLorenzo S, Brauer SL, Edgmont CA, Herfort L, Tebo BM, Zuber P.	PLoS One	10.1371/journal.pone.0046695	2012
Biotechnology	Bioleaching of Gold from Sulfidic Gold Ore Concentrate and Electronic Waste by Roseovarius tolerans and Roseovarius mucosus.	Kudpeng K, Bohu T, Morris C, Thiravetyan P, Kaksonen AH	Microorganisms	10.3390/microorganisms8111783	2020
Genetics	Genome sequence of the Roseovarius mucosus type strain (DSM 17069(T)), a bacteriochlorophyll a-containing representative of the marine Roseobacter group isolated from the dinoflagellate Alexandrium ostenfeldii.	Riedel T, Spring S, Fiebig A, Scheuner C, Petersen J, Goker M, Klenk HP	Stand Genomic Sci	10.1186/1944-3277-10-17	2015
Phylogeny	Roseovarius azorensis sp. nov., isolated from seawater at Espalamaca, Azores.	Rajasabapathy R, Mohandass C, Dastager SG, Liu Q, Khieu TN, Son CK, Li WJ, Colaco A.	Antonie Van Leeuwenhoek	10.1007/s10482-013-0109-9	2014
Phylogeny	Roseovarius lutimaris sp. nov., isolated from a marine tidal flat.	Choi EJ, Lee HJ, Kim JM, Jeon CO.	Int J Syst Evol Microbiol	10.1099/ijs.0.050807-0	2013
Phylogeny	Nitrosophilus alvini gen. nov., sp. nov., a hydrogen-oxidizing chemolithoautotroph isolated from a deep-sea hydrothermal vent in the East Pacific Rise, inferred by a genome-based taxonomy of the phylum "Campylobacterota".	Shiotani T, Mino S, Sato W, Nishikawa S, Yonezawa M, Sievert SM, Sawabe T.	PLoS One	10.1371/journal.pone.0241366	2020
Phylogeny	Roseovarius nitratireducens sp. nov., a halotolerant bacterium isolated from a saline lake.	Shen X, Zhao Z, Wu C, Yu XY, Li Y, Sun C, Wu M	Int J Syst Evol Microbiol	10.1099/ijsem.0.002651	2018
Phylogeny	Roseovarius marisflavi sp. nov., isolated from an amphioxus breeding zone in the coastal region of the Yellow Sea, China.	Li Z, Zhao R, Ji S, Shi X, Zhang XH	Antonie Van Leeuwenhoek	10.1007/s10482-013-9965-6	2013
Phylogeny	Roseovarius mucosus sp. nov., a member of the Roseobacter clade with trace amounts of bacteriochlorophyll a.	Biebl H, Allgaier M, Lunsdorf H, Pukall R, Tindall BJ, Wagner-Dobler I	Int J Syst Evol Microbiol	10.1099/ijs.0.63832-0	2005

References

#6736	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 17069
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#27862	IJSEM 2377 2005 ( DOI 10.1099/ijs.0.63832-0 , PubMed 16280500 )
#31573	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27862
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#68369	Automatically annotated from API 20NE .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

About us

Roseovarius mucosus (DSM 17069, NCIMB 14077, DFL 24)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Halophily

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

Pathway annotation

API 20NE

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000768555

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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