Yersinia enterocolitica (CIP 106676, IP 885)

Name: Yersinia enterocolitica (CIP 106676, IP 885)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 137323

Type strain

Culture col. no. CIP 106676 IP 885

NCBI tax ID(s) 630

Special Collections CIP

History CIP <- 2000, E. Carniel, Inst. Pasteur, Paris, France: strain IP 885 CIP <- 2000, E. Carniel, Inst. Pasteur, Paris, France: strain IP 885

Yersinia enterocolitica CIP 106676 is a facultative anaerobe, Gram-negative, motile bacterium of the family Yersiniaceae.

Gram-negative motile rod-shaped facultative anaerobe Bacteria

Name and taxonomic classification

Culture Collection Numbers

CIP 106676 IP 885

@ref 20215

Last LPSN update 2026-05-29 08:39:00

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Enterobacterales

Family Yersiniaceae

Genus Yersinia

Species Yersinia enterocolitica

Full scientific name Yersinia enterocolitica (Schleifstein and Coleman 1939) Frederiksen 1964 (Approved Lists 1980)

Synonyms (1)

"Bacterium enterocoliticum"

BacDive ID	Other strains from **Yersinia enterocolitica** (77)	Type strain
23975	Y. enterocolitica YeO3-R1, DSM 23247
23976	Y. enterocolitica 6471/76, DSM 23248
23977	Y. enterocolitica 8081-C, DSM 23249
23978	Y. enterocolitica YeO3-c-trs8-R, DSM 23250
134634	Y. enterocolitica CIP 107202, IP 102
135678	Y. enterocolitica 7794, CIP 72.5
135843	Y. enterocolitica 615.85, CIP 101776
138918	Y. enterocolitica Lucas 212, CIP 65.29
141850	Y. enterocolitica CCUG 7758
141880	Y. enterocolitica CCUG 8050
141888	Y. enterocolitica CCUG 8231
141889	Y. enterocolitica CCUG 8232
141890	Y. enterocolitica CCUG 8234
141891	Y. enterocolitica CCUG 8235
141892	Y. enterocolitica CCUG 8236
141893	Y. enterocolitica CCUG 8237
141894	Y. enterocolitica CCUG 8238, CCUG 4587A
141895	Y. enterocolitica CCUG 8240
141897	Y. enterocolitica CCUG 8243
141898	Y. enterocolitica CCUG 8244
141899	Y. enterocolitica CCUG 8245
141902	Y. enterocolitica CCUG 8248
141903	Y. enterocolitica CCUG 8249
141904	Y. enterocolitica CCUG 8250
141905	Y. enterocolitica CCUG 8251
141906	Y. enterocolitica CCUG 8252
142062	Y. enterocolitica CCUG 10211
142677	Y. enterocolitica CCUG 13741
143058	Y. enterocolitica CCUG 16728
143129	Y. enterocolitica CCUG 17328
143311	Y. enterocolitica CCUG 18381
143626	Y. enterocolitica CCUG 20640
144046	Y. enterocolitica CCUG 22570
144528	Y. enterocolitica CCUG 25567
145642	Y. enterocolitica CCUG 29125
146175	Y. enterocolitica CCUG 30507
146559	Y. enterocolitica CCUG 31436
146630	Y. enterocolitica CCUG 31654
146666	Y. enterocolitica CCUG 31752
147069	Y. enterocolitica CCUG 32786
147209	Y. enterocolitica CCUG 33055, CIP Ye 2705, ATCC 27729, NCTC ...
147414	Y. enterocolitica CCUG 33553, NCTC 10460
147972	Y. enterocolitica CCUG 34604
149000	Y. enterocolitica CCUG 36700
149480	Y. enterocolitica CCUG 37816
149508	Y. enterocolitica CCUG 37880
149534	Y. enterocolitica CCUG 37920
149890	Y. enterocolitica CCUG 38621
150217	Y. enterocolitica CCUG 39301
150618	Y. enterocolitica CCUG 41767
150937	Y. enterocolitica CCUG 42789
151100	Y. enterocolitica CCUG 43275
151350	Y. enterocolitica CCUG 43819
152053	Y. enterocolitica CCUG 45643
152197	Y. enterocolitica CCUG 46041
153365	Y. enterocolitica CCUG 49352
153786	Y. enterocolitica CCUG 50971
156498	Y. enterocolitica CCUG 62190
156738	Y. enterocolitica CCUG 64718
169336	Y. enterocolitica Cla-JM-1, DSM 110076
172678	Y. enterocolitica CARE_00001, CIP 111957, IP 42547
172679	Y. enterocolitica CARE_00002, CIP 111958, IP 41598
172680	Y. enterocolitica CARE_00003, CIP 111959, IP 42863
172681	Y. enterocolitica CARE_00004, CIP 111960, IP 39727
172682	Y. enterocolitica CARE_00007, CIP 111963, IP 41365
172683	Y. enterocolitica CARE_00008, CIP 111964, IP 42937
172684	Y. enterocolitica CARE_00009, CIP 111965, IP 39720
172685	Y. enterocolitica CARE_00010, CIP 111966, IP 43284
172686	Y. enterocolitica CARE_00011, CIP 111967, IP 42251
172687	Y. enterocolitica CARE_00012, CIP 111968, IP 39976
172688	Y. enterocolitica CARE_00015, CIP 111971, IP 39285
172689	Y. enterocolitica CARE_00013, CIP 111969, IP 42503
172690	Y. enterocolitica CARE_00014, CIP 111970, IP 39890
172691	Y. enterocolitica CARE_00016, CIP 111972, IP 05342
172692	Y. enterocolitica CARE_00017, CIP 111973, IP 39779
172693	Y. enterocolitica CARE_00021, CIP 111977, IP 35935
172694	Y. enterocolitica CARE_00022, CIP 111978, IP 36813

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
37245	negative	rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Composition	Medium link
37245	MEDIUM 3 - Columbia agar	Columbia agar (39.000 g);distilled water (1000.000 ml)
37245	CIP Medium 72		Medium recipe at CIP
37245	CIP Medium 3		Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
37245	positive	growth	30
37245	positive	growth	5-41

Physiology and metabolism

Oxygen tolerance

37245

Oxygen tolerancefacultative anaerobe

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	+	builds acid from	from API 50CH acid
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	+	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	+	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	+	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	+	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	+	builds acid from	from API 50CH acid
37245	17234 ChEBI	glucose	+	fermentation
68371	17754 ChEBI	glycerol	+	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	+	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	+	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
37245	17716 ChEBI	lactose	-	fermentation
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
37245	15792 ChEBI	malonate	-	assimilation
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
37245	29864 ChEBI	mannitol	+	fermentation
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	+	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
37245	17632 ChEBI	nitrate	+	reduction
37245	16301 ChEBI	nitrite	-	reduction
68371	0 ChEBI	Potassium 5-ketogluconate	+	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
37245	132112 ChEBI	sodium thiosulfate	-	builds gas from
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	+	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
37245	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
37245	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
37245	15688 ChEBI	acetoin	-
37245	17234 ChEBI	glucose		+

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
37245	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68382	beta-galactosidase	+	3.2.1.23	from API zym
37245	beta-galactosidase	+	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
37245	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
37245	gelatinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
37245	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
37245	ornithine decarboxylase	+	4.1.1.17
37245	oxidase	-
37245	phenylalanine ammonia-lyase	-	4.3.1.24
68382	trypsin	-	3.4.21.4	from API zym
37245	tryptophan deaminase	-
37245	urease	+	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
37245	-	+	+	+	-	+	-	-	-	-	+	+	-	+	-	+	-	+	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
37245	not determinedn.d.	+	-	-	+	+	+	-	-	-	+	+	+	+	+	-	-	+	+	+	-	-	+	-	+/-	+/-	+/-	+	+	-	-	+	+	-	-	-	-	-	-	+	-	-	-	-	-	-	-	+	+/-	+

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
37245	not determinedn.d.	+	+	+	+	+	+	-	+	-	+	+	-	-	+	-	+	+	+	-	+	+	+	-	-	-	-	-	-	-	-	-	+	+	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+	+	+	+	+	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	+	-	-	+	+	+	+	+	+	-	-	-	-

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent	Isolation date
37245		United Kingdom	GBR	Europe
37245	Animal, Dog, feces	United Kingdom	GBR	Europe	1970

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
37245	2	Risk group (French classification)

Sequence information

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Rapid identification and typing of Yersinia pestis and other Yersinia species by matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) mass spectrometry.	Ayyadurai S, Flaudrops C, Raoult D, Drancourt M.	BMC Microbiol	10.1186/1471-2180-10-285	2010
Metabolism	Bacterial swimmers that infiltrate and take over the biofilm matrix.	Houry A, Gohar M, Deschamps J, Tischenko E, Aymerich S, Gruss A, Briandet R.	Proc Natl Acad Sci U S A	10.1073/pnas.1200791109	2012
Enzymology	Detection of pathogenic Yersinia enterocolitica by a rapid and sensitive duplex PCR assay.	Wannet WJ, Reessink M, Brunings HA, Maas HM.	J Clin Microbiol	10.1128/jcm.39.12.4483-4486.2001	2001
Phylogeny	Association between clinical presentation, biogroups and virulence attributes of Yersinia enterocolitica strains in human diarrhoeal disease.	Burnens AP, Frey A, Nicolet J.	Epidemiol Infect	10.1017/s0950268800058921	1996
Phylogeny	Detection of Yersinia enterocolitica serogroup O:3 by a PCR method.	Weynants V, Jadot V, Denoel PA, Tibor A, Letesson JJ.	J Clin Microbiol	10.1128/jcm.34.5.1224-1227.1996	1996
Phylogeny	Efficient subtyping of pathogenic Yersinia enterocolitica strains by pulsed-field gel electrophoresis.	Najdenski H, Iteman I, Carniel E.	J Clin Microbiol	10.1128/jcm.32.12.2913-2920.1994	1994
Phylogeny	Proposed revision of the Wauters et al. antigenic scheme for serotyping of Yersinia enterocolitica.	Aleksic S, Bockemuhl J.	J Clin Microbiol	10.1128/jcm.20.1.99-102.1984	1984
	Characterization of a large chromosomal "high-pathogenicity island" in biotype 1B Yersinia enterocolitica.	Carniel E, Guilvout I, Prentice M.	J Bacteriol	10.1128/jb.178.23.6743-6751.1996	1996

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#37245	Collection of Institut Pasteur ; Curators of the CIP; CIP 106676
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .

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Yersinia enterocolitica (CIP 106676, IP 885)

Name and taxonomic classification

Culture Collection Numbers

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API zym

API 50CHac

API biotype100

Isolation, sampling and environmental information

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome-based predictions

Literature

Literature

References

BacDive

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