Name: Paracoccus pantotrophus KS 1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 13708

Type strain:

Species: Paracoccus pantotrophus

Strain Designation: KS 1

Culture col. no.: DSM 11072

Strain history: <- A. P. Wood and S. L. Jordan

NCBI tax ID(s): 82367 (species)

SI-ID 49019

DSM 11072

Other strains from Paracoccus pantotrophus

P. pantotrophus GB 17, DSM 2944, DSM 3967, LMD ... (type strain)
P. pantotrophus 1628, Vogt 11, DSM 415, CCM 1396, ...
P. pantotrophus N-1, DSM 1403, CCUG 13798
P. pantotrophus N4, DSM 1404
P. pantotrophus N5, DSM 1405
P. pantotrophus N7, DSM 1406
P. pantotrophus RHO 21, DSM 6610
P. pantotrophus NKNCYSA, DSM 12449
P. pantotrophus NKNIS, DSM 15418
P. pantotrophus 381, Delft, DSM 65, ATCC 17741, ...
P. pantotrophus KL 1, DSM 11073
P. pantotrophus KS2, DSM 11104
P. pantotrophus JCM 20620, IAM 12479, IFO 16712, ...
P. pantotrophus JCM 6892

Section

Paracoccus pantotrophus KS 1 is a mesophilic bacterium that was isolated from soil associated with Quercus lobator.

mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodobacterales*
	Family	*Paracoccaceae*
	Genus	*Paracoccus*
	Species	**Paracoccus pantotrophus**
	Full Scientific Name (LPSN)	Paracoccus pantotrophus (Robertson and Kuenen 1984) Rainey et al. 1999

Synonym

Thiosphaera pantotropha

Information on culture and growth conditions Culture and growth conditions

[Ref.: #4187]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #4187]

Culture medium growth

[Ref.: #4187]

Culture medium link

Medium recipe at MediaDive

[Ref.: #4187]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #4187]			growth	37 °C

[Ref.: #4187]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #4187]	Sample type/isolated from	soil associated with Quercus lobator
[Ref.: #4187]	Host species	Quercus lobator
[Ref.: #4187]	Geographic location (country and/or sea, region)	Kew, Surrey
[Ref.: #4187]	Country	United Kingdom
[Ref.: #4187]	Country ISO 3 Code	GBR
[Ref.: #4187]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Host	#Plants	#Tree

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #4187]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Paracoccus pantotrophus strain DSM 11072	82367.21	plasmid	PATRIC	82367 tax ID	*

Availability in culture collections External links

[Ref.: #4187]

Culture collection no.

DSM 11072

[Ref.: #82892]

SI-ID 49019

Literature:

Topic	Title	Authors	Journal	DOI	Year
Enzymology	An exceptionally DMSO-tolerant alcohol dehydrogenase for the stereoselective reduction of ketones.	Lavandera I, Kern A, Schaffenberger M, Gross J, Glieder A, de Wildeman S, Kroutil W	ChemSusChem	10.1002/cssc.200800032	2008	*
Genetics	Identification of a transposable genomic island of Paracoccus pantotrophus DSM 11072 by its transposition to a novel entrapment vector pMMB2.	Mikosa M, Sochacka-Pietal M, Baj J, Bartosik D	Microbiology (Reading)	10.1099/mic.0.28603-0	2006	*
Genetics	Identification and distribution of insertion sequences of Paracoccus solventivorans.	Bartosik D, Szymanik M, Baj J	Appl Environ Microbiol	10.1128/AEM.69.12.7002-7008.2003	2003	*
Genetics	Molecular characterization of functional modules of plasmid pWKS1 of Paracoccus pantotrophus DSM 11072.	Bartosik D, Baj J, Sochacka M, Piechucka E, Wlodarczyk M	Microbiology (Reading)	10.1099/00221287-148-9-2847	2002	*

References

#4187

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 11072

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#82892

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID49019.1 )

* These data were automatically processed and therefore are not curated

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