Name: Hoylesella enoeca CIP 104472
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 137073

Type strain:

Species: Hoylesella enoeca

Culture col. no.: CIP 104472, ATCC 51261, CCUG 39971, JCM 12259, NCTC 13068, VPI D194A-25A

Strain history: CIP <- 1995, ATCC <- W.E.C. Moore: strain VPI D194A-25A

NCBI tax ID(s): 76123 (species)

SI-ID 46144

ATCC 51261, CIP 104472, CCUG 39971, JCM 12259, NCTC 13068, DSM 19773

Special Collections

Section

Hoylesella enoeca CIP 104472 is an anaerobe, Gram-negative bacterium of the family Prevotellaceae.

Gram-negative
anaerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Bacteroidia*
	Order	*Bacteroidales*
	Family	*Prevotellaceae*
	Genus	*Hoylesella*
	Species	**Hoylesella enoeca**
	Full Scientific Name (LPSN)	Hoylesella enoeca (Moore et al. 1994) Hitch et al. 2023

Synonym

Prevotella enoeca

Information on morphological and physiological properties Morphology

[Ref.: #36921]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %96.007

[Ref.: #36921]	Cell shape	rod-shaped

[Ref.: #36921]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %92.5

Information on culture and growth conditions Culture and growth conditions

[Ref.: #36921]

Culture medium

MEDIUM 6 - Columbia agar with 10 % horse blood

[Ref.: #36921]

Culture medium growth

[Ref.: #36921]

Culture medium composition

expand / minimize

[Ref.: #36921]

Culture medium

CIP Medium 20

[Ref.: #36921]

Culture medium growth

[Ref.: #36921]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #36921]

Culture medium

CIP Medium 6

[Ref.: #36921]

Culture medium growth

[Ref.: #36921]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #36921]			growth	37 °C
[Ref.: #67770]			growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Oxygen tolerance

anaerobe Confidence in %90.247

[Ref.: #67770]

Observation

quinones: MK-11. MK-12

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68380]	arginine ChEBI	-	hydrolysis	* from API rID32A
[Ref.: #68380]	D-mannose ChEBI	-	fermentation	* from API rID32A
[Ref.: #68380]	L-glutamate ChEBI	-	degradation	* from API rID32A
[Ref.: #36921]	nitrate ChEBI	-	reduction
[Ref.: #68380]	nitrate ChEBI	-	reduction	* from API rID32A
[Ref.: #36921]	nitrite ChEBI	-	reduction
[Ref.: #68380]	raffinose ChEBI	-	fermentation	* from API rID32A
[Ref.: #68380]	tryptophan ChEBI	-	energy source	* from API rID32A
[Ref.: #68380]	urea ChEBI	-	hydrolysis	* from API rID32A

	Metabolite production	Metabolite	Production
[Ref.: #36921]		indole ChEBI	no
[Ref.: #68380]		indole ChEBI	no	* from API rID32A

	Physiological tests	Metabolite	Indole test
[Ref.: #68380]		indole ChEBI	-	* from API rID32A

	Enzyme	Enzyme activity	EC number
[Ref.: #68380]	alanine arylamidase	+	3.4.11.2	* from API rID32A
[Ref.: #68380]	alkaline phosphatase	+	3.1.3.1	* from API rID32A
[Ref.: #68380]	alpha-arabinosidase	-	3.2.1.55	* from API rID32A
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68380]	alpha-fucosidase	+	3.2.1.51	* from API rID32A
[Ref.: #68380]	alpha-galactosidase	-	3.2.1.22	* from API rID32A, API zym
[Ref.: #68380]	alpha-glucosidase	+	3.2.1.20	* from API rID32A
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68380]	arginine dihydrolase	-	3.5.3.6	* from API rID32A
[Ref.: #68380]	beta-galactosidase	+	3.2.1.23	* from API rID32A
[Ref.: #68380]	beta-Galactosidase 6-phosphate	-		* from API rID32A
[Ref.: #68380]	beta-glucosidase	-	3.2.1.21	* from API rID32A, API zym
[Ref.: #68380]	beta-glucuronidase	-	3.2.1.31	* from API rID32A, API zym
[Ref.: #36921]	catalase	-	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68380]	glutamate decarboxylase	-	4.1.1.15	* from API rID32A
[Ref.: #68380]	glutamyl-glutamate arylamidase	-		* from API rID32A
[Ref.: #68380]	glycin arylamidase	-		* from API rID32A
[Ref.: #68380]	histidine arylamidase	-		* from API rID32A
[Ref.: #68380]	L-arginine arylamidase	-		* from API rID32A
[Ref.: #68380]	leucine arylamidase	-	3.4.11.1	* from API rID32A, API zym
[Ref.: #68380]	leucyl glycin arylamidase	+	3.4.11.1	* from API rID32A
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68380]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API rID32A
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #36921]	oxidase	-
[Ref.: #68380]	phenylalanine arylamidase	-		* from API rID32A
[Ref.: #68380]	proline-arylamidase	-	3.4.11.5	* from API rID32A
[Ref.: #68380]	pyrrolidonyl arylamidase	+	3.4.19.3	* from API rID32A
[Ref.: #68380]	serine arylamidase	-		* from API rID32A
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68380]	tryptophan deaminase	-	4.1.99.1	* from API rID32A
[Ref.: #68380]	tyrosine arylamidase	-		* from API rID32A
[Ref.: #36921]	urease	-	3.5.1.5
[Ref.: #68380]	urease	-	3.5.1.5	* from API rID32A
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® rID32A:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Urease/urea hydrolysisURE	Arginine dihydrolaseADH (Arg)	alpha-Galactosidasealpha GAL	beta-Galactosidasebeta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha-Glucosidasealpha GLU	beta-Glucosidasebeta GLU	alpha-Arabinosidasealpha ARA	beta-Glucuronidasebeta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	Fermentation of D-mannoseMNE	Fermentation of raffinoseRAF	Glutamate decarboxylaseGDC	alpha-Fucosidasealpha FUC	Reduction of nitrateNIT	Indole productionIND	Alkaline phosphatasePAL	L-arginine arylamidaseArgA	Proline arylamidaseProA	Leucyl glycin arylamidaseLGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	Pyrrolidonyl arylamidasePyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
[Ref.: #55016]	4806	-	-	-	+	-	+	-	-	-	+	-	-	-	+	-	-	+	-	-	+	-	-	+	-	+	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #55016]	1405	-	+	-	-	-	-	-	-	-	-	+	+	-	+	-	+	-	+	-	+
[Ref.: #36921]	7980	-	-	+	+	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #55016]	Sample type/isolated from	Human gingival crevice
[Ref.: #55016]	Country	USA
[Ref.: #55016]	Country ISO 3 Code	USA
[Ref.: #55016]	Continent	North America

[Ref.: #67770]	Sample type/isolated from	Gingival crevices of humans with healthy gingiva and periodontitis

[Ref.: #36921]	Sample type/isolated from	Human, Gingival crevice
[Ref.: #36921]	Country	United States of America
[Ref.: #36921]	Country ISO 3 Code	USA
[Ref.: #36921]	Continent	North America

[Ref.: #36921]	Country	USA
[Ref.: #36921]	Country ISO 3 Code	USA
[Ref.: #36921]	Continent	North America
* marker position based on {}

Isolation sources categories

#Host	#Human	-
#Host Body-Site	#Oral cavity and airways	#Gingiva
#Host Body-Site	#Oral cavity and airways	#Tooth

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AJ005635 (>99% sequence identity) for Prevotella enoeca subclade from Microbeatlas

Aquatic Samples	154
Soil Samples	191
Animal Samples	14845
Plant Samples	59
Total Samples	15249

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #36921]

Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Prevotella enoeca gene for 16S ribosomal RNA, partial sequence, strain: JCM 12259	AB547684	1480	GenBank ENA	76123 tax ID
[Ref.: #67770]	Prevotella enoeca 16S rRNA gene, strain ATCC 51261	AJ005635	1447	GenBank ENA	76123 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Hoylesella enoeca JCM 12259	GCA_000613405	contig	GenBank ENA	1235815 tax ID	*
[Ref.: #66792]	Prevotella enoeca JCM 12259	1235815.4	wgs	PATRIC	1235815 tax ID	*
[Ref.: #66792]	Prevotella enoeca JCM 12259	2585427897	draft	JGI IMG/M	1235815 tax ID	*

[Ref.: #67770]	GC-content	47 mol%
[Ref.: #67770]	GC-content	47.5 mol%	high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Prevotella enoeca JCM 12259 PATRIC: 1235815.4
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	96.007	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	yes	90.247	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	89.496	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	97.204	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	94.327	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	92.5	no

Availability in culture collections External links

[Ref.: #36921]

Culture collection no.

CIP 104472, ATCC 51261, CCUG 39971, JCM 12259, NCTC 13068, VPI D194A-25A

[Ref.: #94047]

SI-ID 46144

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Descriptions of Prevotella tannerae sp. nov. and Prevotella enoeca sp. nov. from the human gingival crevice and emendation of the description of Prevotella zoogleoformans.	Moore LV, Johnson JL, Moore WE	Int J Syst Bacteriol	10.1099/00207713-44-4-599	1994	*
Phylogeny	Prevotella pleuritidis sp. nov., isolated from pleural fluid.	Sakamoto M, Ohkusu K, Masaki T, Kako H, Ezaki T, Benno Y	Int J Syst Evol Microbiol	10.1099/ijs.0.64885-0	2007	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#36921 Collection of Institut Pasteur ; Curators of the CIP; CIP 104472
#55016 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 39971

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68380

Automatically annotated from API rID32A .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#94047

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID46144.1 )

* These data were automatically processed and therefore are not curated

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Prevotella enoeca JCM 12259

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