Prevotella enoeca (CIP 104472, ATCC 51261, CCUG 39971)

Name: Prevotella enoeca (CIP 104472, ATCC 51261, CCUG 39971)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 137073

Type strain

Culture col. no. CIP 104472 ATCC 51261 CCUG 39971 JCM 12259 VPI D194A-25A 1 more

NCBI tax ID(s) 76123

Special Collections CCUG JCM CIP

History JCM <-- CIP 104472 <-- ATCC 51261 <-- W. E. C. Moore VPI D194A-25A. CIP <- 1995, ATCC <- W.E.C. Moore: strain VPI D194A-25A

Links

Prevotella enoeca CIP 104472 is a Gram-negative, rod-shaped bacterium of the family Prevotellaceae.

Gram-negative rod-shaped genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 46144

ATCC 51261,CIP 104472,CCUG 39971,JCM 12259,NCTC 13068,DSM 19773

@ref 20215

Last LPSN update 2026-05-29 08:38:56

Domain Bacteria

Phylum Bacteroidota

Class Bacteroidia

Order Bacteroidales

Family Prevotellaceae

Genus Prevotella

Species Prevotella enoeca

Full scientific name Prevotella enoeca Moore et al. 1994

Synonyms (1)

Hoylesella enoeca

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Confidence
36921	negative	rod-shaped
125438			92.5
125438	negative		96.007

Culture and growth conditions

Culture medium

@ref	Name	Composition	Medium link
36921	MEDIUM 6 - Columbia agar with 10 % horse blood	Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml)
36921	CIP Medium 20		Medium recipe at CIP
36921	CIP Medium 6		Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
36921	positive	growth	37
67770	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125438	anaerobe	90.247

Spore formation

@ref	Spore formation	Confidence
125439		99.185

Observation

67770

Observationquinones: MK-11. MK-12

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68380	29016 ChEBI	arginine	-	hydrolysis	from API rID32A
68380	16024 ChEBI	D-mannose	-	fermentation	from API rID32A
68380	29985 ChEBI	L-glutamate	-	degradation	from API rID32A
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
36921	17632 ChEBI	nitrate	-	reduction
36921	16301 ChEBI	nitrite	-	reduction
68380	16634 ChEBI	raffinose	-	fermentation	from API rID32A
68380	27897 ChEBI	tryptophan	-	energy source	from API rID32A
68380	16199 ChEBI	urea	-	hydrolysis	from API rID32A

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68380	35581 ChEBI	indole		from API rID32A
36921	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68380	35581 ChEBI	indole	-	from API rID32A

Enzymes

@ref	Value	Activity	Ec
68380	alanine arylamidase	+	3.4.11.2	from API rID32A
68380	alkaline phosphatase	+	3.1.3.1	from API rID32A
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68380	alpha-fucosidase	+	3.2.1.51	from API rID32A
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68380	alpha-galactosidase	-	3.2.1.22	from API rID32A
68380	alpha-glucosidase	+	3.2.1.20	from API rID32A
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68380	arginine dihydrolase	-	3.5.3.6	from API rID32A
68380	beta-galactosidase	+	3.2.1.23	from API rID32A
68380	beta-Galactosidase 6-phosphate	-		from API rID32A
68382	beta-glucosidase	-	3.2.1.21	from API zym
68380	beta-glucosidase	-	3.2.1.21	from API rID32A
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
68382	beta-glucuronidase	-	3.2.1.31	from API zym
36921	catalase	-	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68380	glutamate decarboxylase	-	4.1.1.15	from API rID32A
68380	glutamyl-glutamate arylamidase	-		from API rID32A
68380	glycin arylamidase	-		from API rID32A
68380	histidine arylamidase	-		from API rID32A
68380	L-arginine arylamidase	-		from API rID32A
68382	leucine arylamidase	-	3.4.11.1	from API zym
68380	leucine arylamidase	-	3.4.11.1	from API rID32A
68380	leucyl glycin arylamidase	+	3.4.11.1	from API rID32A
68382	lipase (C 14)	-		from API zym
68380	N-acetyl-beta-glucosaminidase	+	3.2.1.52	from API rID32A
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
36921	oxidase	-
68380	phenylalanine arylamidase	-		from API rID32A
68380	proline-arylamidase	-	3.4.11.5	from API rID32A
68380	pyrrolidonyl arylamidase	+	3.4.19.3	from API rID32A
68380	serine arylamidase	-		from API rID32A
68382	trypsin	-	3.4.21.4	from API zym
68380	tryptophan deaminase	-	4.1.99.1	from API rID32A
68380	tyrosine arylamidase	-		from API rID32A
36921	urease	-	3.5.1.5
68380	urease	-	3.5.1.5	from API rID32A
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
55016	-	+	-	-	-	-	-	-	-	-	+	+	-	+	-	+	-	+	-	+
36921	-	-	+	+	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
55016	-	-	-	+	-	+	-	-	-	+	-	-	-	+	-	-	+	-	-	+	-	-	+	-	+	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body-Site	#Oral cavity and airways	#Gingiva
#Host Body-Site	#Oral cavity and airways	#Tooth

Isolation

@ref	Sample type	Host species	Country	Country ISO 3 Code	Continent
36921			USA	USA	North America
55016	Human gingival crevice	Homo sapiens	USA	USA	North America
67770	Gingival crevices of humans with healthy gingiva and periodontitis	Homo sapiens
36921	Human, Gingival crevice	Homo sapiens	United States of America	USA	North America

Taxonmaps

69479

Global distribution of 16S sequence AJ005635 (>99% sequence identity) for Prevotella enoeca subclade from Microbeatlas

Aquatic Samples	154
Soil Samples	191
Animal Samples	14845
Plant Samples	59
Total Samples	15249

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
36921	2	Risk group (French classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM61340v1 assembly for Hoylesella enoeca JCM 12259	contig	GCA_000613405	1235815.4	2585427897	1235815	44.79

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
67770	Prevotella enoeca gene for 16S ribosomal RNA, partial sequence, strain: JCM 12259	AB547684	1480	76123
67770	Prevotella enoeca 16S rRNA gene, strain ATCC 51261	AJ005635	1447	76123
124043	Prevotella enoeca strain JCM 12259 16S ribosomal RNA gene, partial sequence.	MN326665	1437	76123

GC content

@ref	GC-content (mol%)	Method
67770	47
67770	47.5	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM61340v1 assembly for Hoylesella enoeca JCM 12259
BV-BRC: 1235815.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	gram_stain	BacteriaNetⓘ	negative	67.60	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	69.27	no
125439	motility	BacteriaNetⓘ	no	88.47	no
125439	spore_formation	BacteriaNetⓘ	no	99.19	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Prevotella enoeca JCM 12259
PATRIC: 1235815.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	96.01	no
125438	anaerobic	anaerobicⓘ	yes	90.25	no
125438	spore-forming	spore-formingⓘ	no	89.50	no
125438	aerobic	aerobicⓘ	no	97.20	no
125438	thermophilic	thermophileⓘ	no	94.33	yes
125438	flagellated	motile2+ⓘ	no	92.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Descriptions of Prevotella tannerae sp. nov. and Prevotella enoeca sp. nov. from the human gingival crevice and emendation of the description of Prevotella zoogleoformans.	Moore LV, Johnson JL, Moore WE	Int J Syst Bacteriol	10.1099/00207713-44-4-599	1994
Phylogeny	Prevotella pleuritidis sp. nov., isolated from pleural fluid.	Sakamoto M, Ohkusu K, Masaki T, Kako H, Ezaki T, Benno Y	Int J Syst Evol Microbiol	10.1099/ijs.0.64885-0	2007

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#36921	Collection of Institut Pasteur ; Curators of the CIP; CIP 104472
#55016	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 39971
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68380	Automatically annotated from API rID32A .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Prevotella enoeca (CIP 104472, ATCC 51261, CCUG 39971)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Observation

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API zym

API rID32A

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000613405

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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