Citrobacter koseri (CIP 104933, 1381-70)

Name: Citrobacter koseri (CIP 104933, 1381-70)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 136758

Type strain

Strain Designation 1381-70

Culture col. no. CIP 104933 1381-70

NCBI tax ID(s) 545

Special Collections CIP

Links

Citrobacter koseri 1381-70 is a facultative anaerobe, mesophilic, Gram-negative prokaryote of the family Enterobacteriaceae.

Gram-negative motile rod-shaped facultative anaerobe mesophilic

Name and taxonomic classification

SI-ID 67891

CIP 104933

@ref 20215

Last LPSN update 2025-12-16 10:02:39

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Enterobacterales

Family Enterobacteriaceae

Genus Citrobacter

Species Citrobacter koseri

Full scientific name Citrobacter koseri Frederiksen 1970 (Approved Lists 1980)

Synonyms (4)

Levinea malonatica
"Aerobacter diversum"
Citrobacter diversus
Citrobacter diversum

BacDive ID	Other strains from **Citrobacter koseri** (35)	Type strain
4329	C. koseri DSM 4595, ATCC 27028, CCM 2537, CIP 82.87, ... (type strain)
4328	C. koseri 3613-63, DSM 4570, ATCC 27156, CIP 82.94, ...
4330	C. koseri DSM 4596, ATCC 25408, CIP 82.88, NCTC 10810, ...
4331	C. koseri 9910, DSM 46297, ATCC 27027, CCM 2536, IMET ...
100072	C. koseri STI09062(IMET), 1110-005,
100073	C. koseri STI09067(IMET), 1110-017,
134844	C. koseri CIP 76.3
135384	C. koseri CIP 72.14
135668	C. koseri CIP 72.8
137327	C. koseri CIP 106949
138183	C. koseri 32, CIP 105177, ATCC 29936
138414	C. koseri Cd4, CIP 105542
138950	C. koseri Riehli, CIP 72.11
139155	C. koseri 8127-86, CIP 104558
141202	C. koseri CCUG 177
141653	C. koseri CCUG 4427
141711	C. koseri CCUG 5071
141733	C. koseri CCUG 5847 A
141739	C. koseri CCUG 5885
141751	C. koseri CCUG 6266
141773	C. koseri CCUG 6597
141774	C. koseri CCUG 6639
141775	C. koseri CCUG 6640
141785	C. koseri CCUG 6741
143101	C. koseri CCUG 17211
143923	C. koseri CCUG 21861
144517	C. koseri CCUG 25452
144818	C. koseri CCUG 26653
145886	C. koseri CCUG 29880
145887	C. koseri CCUG 29881
147561	C. koseri CCUG 33803
148610	C. koseri CCUG 35708
151611	C. koseri CCUG 44448
154860	C. koseri CCUG 55438
154991	C. koseri CCUG 55990

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
36300	negative	rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Growth	Composition
36300	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
36300	CIP Medium 3

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
36300	positive	growth	30	mesophilic
36300	positive	growth	30-41
36300	negative	growth	5
36300	negative	growth	10

Physiology and metabolism

Oxygen tolerance

36300

Oxygen tolerancefacultative anaerobe

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
36300	16947 ChEBI	citrate	+	carbon source
36300	17234 ChEBI	glucose	+	fermentation
36300	17234 ChEBI	glucose	+	degradation
36300	17716 ChEBI	lactose	-	fermentation
36300	15792 ChEBI	malonate	+	assimilation
36300	29864 ChEBI	mannitol	+	fermentation
36300	17632 ChEBI	nitrate	+	reduction
36300	16301 ChEBI	nitrite	+	reduction
36300	132112 ChEBI	sodium thiosulfate	-	builds gas from

Antibiotic resistance

@ref	Metabolite	Is antibiotic	Is sensitive	Is resistant
36300	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
36300	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
36300	15688 ChEBI	acetoin	-
36300	17234 ChEBI	glucose

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
36300	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
36300	beta-galactosidase	+	3.2.1.23
68382	beta-galactosidase	+	3.2.1.23	from API zym
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
36300	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
36300	gelatinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
36300	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
36300	ornithine decarboxylase	+	4.1.1.17
36300	oxidase	-
36300	phenylalanine ammonia-lyase	-	4.3.1.24
68382	trypsin	-	3.4.21.4	from API zym
36300	tryptophan deaminase	-
36300	urease	+	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
36300	-	+	-	-	-	+	-	-	-	-	+	+	-	+	-	+	+	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
36300	not determinedn.d.	+	+	+	+	+	-	-	-	-	+	+	-	-	+	-	+	+	+	-	+	+	+	+	+	+	-	+	-	-	-	-	+	+	+	+	-	+	+	-	+	-	+	-	+	+	-	-	-	+	+	+	-	-	+	+	+	+	+	-	+	+	-	-	-	-	+	+	-	-	-	-	-	-	+	-	+	-	-	-	+	+	-	-	+	+	-	-	-	-	+	+	-	+	+	+	+	+	+	-

Isolation, sampling and environmental information

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
36300	1	Risk group (French classification)

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#36300	Collection of Institut Pasteur ; Curators of the CIP; CIP 104933
#68382	Automatically annotated from API zym .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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