Mycoplasma capricolum Kid is a bacterium that was isolated from Caprine.
genome sequence 16S sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Mycoplasmatota |
| Class Mollicutes |
| Order Mycoplasmatales |
| Family Mycoplasmataceae |
| Genus Mycoplasma |
| Species Mycoplasma capricolum |
| Full scientific name Mycoplasma capricolum Tully et al. 1974 (Approved Lists 1980) |
| @ref | Name | Growth | Composition | Medium link | |
|---|---|---|---|---|---|
| 35700 | MEDIUM 88 - for Mycoplasma and Acholeplasma | Distilled water make up to (670.000 ml);PPLO broth (17.000 g);Sterile supplement - M00273 (210.000 ml);Yeast extract solution 25 % - M00263 (100.000 ml);0.1 % Phenol red - M00387 (20.000 ml) | |||
| 35700 | CIP Medium 88 | Medium recipe at CIP |
| @ref | Growth | Type | Temperature (°C) | |
|---|---|---|---|---|
| 35700 | positive | growth | 37 |
| 51158 | Sample typeCaprine |
| @ref | Biosafety level | Biosafety level comment | |
|---|---|---|---|
| 35700 | 2 | Risk group (French classification) |
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 66792 | ASM1276v1 assembly for Mycoplasma capricolum subsp. capricolum ATCC 27343 | complete | 340047 | 99.26 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 124043 | Mycoplasma capricolum subsp. capricolum strain ATCC 27343 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence. | AY779749 | 867 | 340047 | ||
| 124043 | Mycoplasma capricolum capricolum California kid 16S ribosomal RNA (rrnA) gene, partial sequence. | U26045 | 1466 | 340047 | ||
| 124043 | Mycoplasma capricolum capricolum California kid 16S ribosomal RNA (rrnB) gene. | U26046 | 1524 | 340047 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | facultative anaerobe | 98.79 | no |
| 125439 | gram_stain | BacteriaNetⓘ | negative | 99.11 | no |
| 125439 | motility | BacteriaNetⓘ | yes | 40.77 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 99.61 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 75.26 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 82.57 | no |
| 125438 | aerobic | aerobicⓘ | no | 88.83 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 95.90 | no |
| 125438 | thermophilic | thermophileⓘ | no | 95.40 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 96.89 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Genetics | First Report and Comparative Genomic Analysis of Mycoplasma capricolum subsp. capricolum HN-B in Hainan Island, China. | Zhang Z, He M, Jiang J, Li X, Li H, Zhang W, Chen S, Du L, Man C, Chen Q, Gao H, Wang F. | Microorganisms | 10.3390/microorganisms10112298 | 2022 | |
| Genetics | A toolbox for manipulating the genome of the major goat pathogen, Mycoplasma capricolum subsp. capripneumoniae. | Gourgues G, Manso-Silvan L, Chamberland C, Sirand-Pugnet P, Thiaucourt F, Blanchard A, Baby V, Lartigue C. | Microbiology (Reading) | 10.1099/mic.0.001423 | 2024 | |
| Genetics | Genome-Wide Analysis of the First Sequenced Mycoplasma capricolum subsp. capripneumoniae Strain M1601. | Chen S, Hao H, Zhao P, Thiaucourt F, He Y, Gao P, Guo H, Ji W, Wang Z, Lu Z, Chu Y, Liu Y. | G3 (Bethesda) | 10.1534/g3.117.300085 | 2017 | |
| Comparative genomics of Mycoplasma feriruminatoris, a fast-growing pathogen of wild Caprinae. | Baby V, Ambroset C, Gaurivaud P, Falquet L, Boury C, Guichoux E, Jores J, Lartigue C, Tardy F, Sirand-Pugnet P. | Microb Genom | 10.1099/mgen.0.001112 | 2023 | ||
| Cytoskeletal components can turn wall-less spherical bacteria into kinking helices. | Lartigue C, Lambert B, Rideau F, Dahan Y, Decossas M, Hillion M, Douliez JP, Hardouin J, Lambert O, Blanchard A, Beven L. | Nat Commun | 10.1038/s41467-022-34478-0 | 2022 | ||
| Genetics | First Report and Comparative Genomic Analysis of a Mycoplasma mycoides Subspecies capri HN-A in Hainan Island. | Zhang Z, Jiang J, He M, Li H, Cheng Y, An Q, Chen S, Du L, Man C, Chen Q, Li L, Wang F. | Microorganisms | 10.3390/microorganisms10101908 | 2022 | |
| Genetics | Novel Candidates for Vaccine Development Against Mycoplasma Capricolum Subspecies Capripneumoniae (Mccp)-Current Knowledge and Future Prospects. | Yatoo MI, Parray OR, Muheet, Bhat RA, Nazir QU, Haq AU, Malik HU, Fazilli MUR, Gopalakrishnan A, Bashir ST, Tiwari R, Khurana SK, Chaicumpa W, Dhama K. | Vaccines (Basel) | 10.3390/vaccines7030071 | 2019 | |
| Genetics | Combining Fusion of Cells with CRISPR-Cas9 Editing for the Cloning of Large DNA Fragments or Complete Bacterial Genomes in Yeast. | Guesdon G, Gourgues G, Rideau F, Ipoutcha T, Manso-Silvan L, Jules M, Sirand-Pugnet P, Blanchard A, Lartigue C. | ACS Synth Biol | 10.1021/acssynbio.3c00248 | 2023 | |
| Pathogenicity | Efficacy data of halogenated phenazine and quinoline agents and an NH125 analogue to veterinary mycoplasmas. | Valentine-King MA, Cisneros K, James MO, Huigens RW, Brown MB. | BMC Vet Res | 10.1186/s12917-020-02324-4 | 2020 | |
| Metabolism | Enhancement of targeted homologous recombination in Mycoplasma mycoides subsp. capri by inclusion of heterologous recA. | Allam AB, Reyes L, Assad-Garcia N, Glass JI, Brown MB. | Appl Environ Microbiol | 10.1128/aem.00056-10 | 2010 | |
| tRNAmodpred: A computational method for predicting posttranscriptional modifications in tRNAs. | Machnicka MA, Dunin-Horkawicz S, de Crecy-Lagard V, Bujnicki JM. | Methods | 10.1016/j.ymeth.2016.03.013 | 2016 | ||
| Comprehensive analysis of stop codon usage in bacteria and its correlation with release factor abundance. | Korkmaz G, Holm M, Wiens T, Sanyal S. | J Biol Chem | 10.1074/jbc.m114.606632 | 2014 | ||
| Transfer RNA misidentification scrambles sense codon recoding. | Krishnakumar R, Prat L, Aerni HR, Ling J, Merryman C, Glass JI, Rinehart J, Soll D. | Chembiochem | 10.1002/cbic.201300444 | 2013 | ||
| Cross-Genome Comparisons of Newly Identified Domains in Mycoplasma gallisepticum and Domain Architectures with Other Mycoplasma species. | Chilamakuri CS, Joshi A, Rani SS, Offmann B, Sowdhamini R. | Comp Funct Genomics | 10.1155/2011/878973 | 2011 | ||
| Metabolism | The flavoprotein Mcap0476 (RlmFO) catalyzes m5U1939 modification in Mycoplasma capricolum 23S rRNA. | Lartigue C, Lebaudy A, Blanchard A, El Yacoubi B, Rose S, Grosjean H, Douthwaite S. | Nucleic Acids Res | 10.1093/nar/gku518 | 2014 | |
| Phylogeny | Impact of donor-recipient phylogenetic distance on bacterial genome transplantation. | Labroussaa F, Lebaudy A, Baby V, Gourgues G, Matteau D, Vashee S, Sirand-Pugnet P, Rodrigue S, Lartigue C. | Nucleic Acids Res | 10.1093/nar/gkw688 | 2016 | |
| Metabolism | Towards the characterization of the hidden world of small proteins in Staphylococcus aureus, a proteogenomics approach. | Fuchs S, Kucklick M, Lehmann E, Beckmann A, Wilkens M, Kolte B, Mustafayeva A, Ludwig T, Diwo M, Wissing J, Jansch L, Ahrens CH, Ignatova Z, Engelmann S. | PLoS Genet | 10.1371/journal.pgen.1009585 | 2021 | |
| Secreted MbovP0145 Promotes IL-8 Expression through Its Interactive beta-Actin and MAPK Activation and Contributes to Neutrophil Migration. | Lu D, Zhang H, Zhang Y, Zhao G, Anwar Khan F, Chen Y, Hu C, Yang L, Chen H, Guo A. | Pathogens | 10.3390/pathogens10121628 | 2021 | ||
| Genetics | Evidence for the Cytoplasmic Localization of the L-alpha-Glycerophosphate Oxidase in Members of the "Mycoplasma mycoides Cluster". | Schumacher M, Nicholson P, Stoffel MH, Chandran S, D'Mello A, Ma L, Vashee S, Jores J, Labroussaa F. | Front Microbiol | 10.3389/fmicb.2019.01344 | 2019 | |
| Multi-locus sequence analysis of Mycoplasma capricolum subsp. capripneumoniae for the molecular epidemiology of contagious caprine pleuropneumonia. | Manso-Silvan L, Dupuy V, Chu Y, Thiaucourt F. | Vet Res | 10.1186/1297-9716-42-86 | 2011 | ||
| Phylogeny | Probabilistic inference of lateral gene transfer events. | Khan MA, Mahmudi O, Ullah I, Arvestad L, Lagergren J. | BMC Bioinformatics | 10.1186/s12859-016-1268-2 | 2016 | |
| Enzymology | Bioinformatics identification of MurJ (MviN) as the peptidoglycan lipid II flippase in Escherichia coli. | Ruiz N. | Proc Natl Acad Sci U S A | 10.1073/pnas.0808352105 | 2008 | |
| Metabolism | Minimalistic mycoplasmas harbor different functional toxin-antitoxin systems. | Hill V, Akarsu H, Barbarroja RS, Cippa VL, Kuhnert P, Heller M, Falquet L, Heller M, Stoffel MH, Labroussaa F, Jores J. | PLoS Genet | 10.1371/journal.pgen.1009365 | 2021 | |
| Development of oriC-Based Plasmids for Mesoplasma florum. | Matteau D, Pepin ME, Baby V, Gauthier S, Arango Giraldo M, Knight TF, Rodrigue S. | Appl Environ Microbiol | 10.1128/aem.03374-16 | 2017 | ||
| Identification of novel immunogenic proteins from Mycoplasma bovis and establishment of an indirect ELISA based on recombinant E1 beta subunit of the pyruvate dehydrogenase complex. | Sun Z, Fu P, Wei K, Zhang H, Zhang Y, Xu J, Jiang F, Liu X, Xu W, Wu W. | PLoS One | 10.1371/journal.pone.0088328 | 2014 | ||
| A physical map for Mycoplasma capricolum Cal. kid with loci for all known tRNA species. | Whitley JC, Muto A, Finch LR. | Nucleic Acids Res | 10.1093/nar/19.2.399 | 1991 | ||
| Metabolism | The Effect of an Alternate Start Codon on Heterologous Expression of a PhoA Fusion Protein in Mycoplasma gallisepticum. | Panicker IS, Browning GF, Markham PF. | PLoS One | 10.1371/journal.pone.0127911 | 2015 | |
| Phylogeny | Identification and subtyping of clinically relevant human and ruminant mycoplasmas by use of matrix-assisted laser desorption ionization-time of flight mass spectrometry. | Pereyre S, Tardy F, Renaudin H, Cauvin E, Del Pra Netto Machado L, Tricot A, Benoit F, Treilles M, Bebear C. | J Clin Microbiol | 10.1128/jcm.01573-13 | 2013 | |
| Pathogenicity | Decontamination of mycoplasma-contaminated Orientia tsutsugamushi strains by repeating passages through cell cultures with antibiotics. | Ogawa M, Uchiyama T, Satoh M, Ando S. | BMC Microbiol | 10.1186/1471-2180-13-32 | 2013 | |
| Life without tRNAArg-adenosine deaminase TadA: evolutionary consequences of decoding the four CGN codons as arginine in Mycoplasmas and other Mollicutes. | Yokobori S, Kitamura A, Grosjean H, Bessho Y. | Nucleic Acids Res | 10.1093/nar/gkt356 | 2013 | ||
| Evolutionary switches between two serine codon sets are driven by selection. | Rogozin IB, Belinky F, Pavlenko V, Shabalina SA, Kristensen DM, Koonin EV. | Proc Natl Acad Sci U S A | 10.1073/pnas.1615832113 | 2016 | ||
| Multiple Origins and Specific Evolution of CRISPR/Cas9 Systems in Minimal Bacteria (Mollicutes). | Ipoutcha T, Tsarmpopoulos I, Talenton V, Gaspin C, Moisan A, Walker CA, Brownlie J, Blanchard A, Thebault P, Sirand-Pugnet P. | Front Microbiol | 10.3389/fmicb.2019.02701 | 2019 | ||
| A new integrative conjugative element occurs in Mycoplasma agalactiae as chromosomal and free circular forms. | Marenda M, Barbe V, Gourgues G, Mangenot S, Sagne E, Citti C. | J Bacteriol | 10.1128/jb.00114-06 | 2006 | ||
| Distinctive repertoire of contingency genes conferring mutation- based phase variation and combinatorial expression of surface lipoproteins in Mycoplasma capricolum subsp. capricolum of the Mycoplasma mycoides phylogenetic cluster. | Wise KS, Foecking MF, Roske K, Lee YJ, Lee YM, Madan A, Calcutt MJ. | J Bacteriol | 10.1128/jb.00252-06 | 2006 | ||
| New selectable marker for manipulating the simple genomes of Mycoplasma species. | Algire MA, Lartigue C, Thomas DW, Assad-Garcia N, Glass JI, Merryman C. | Antimicrob Agents Chemother | 10.1128/aac.00388-09 | 2009 | ||
| Enzymology | Partitioning, movement, and positioning of nucleoids in Mycoplasma capricolum. | Seto S, Miyata M. | J Bacteriol | 10.1128/jb.181.19.6073-6080.1999 | 1999 | |
| Putative essential and core-essential genes in Mycoplasma genomes. | Lin Y, Zhang RR. | Sci Rep | 10.1038/srep00053 | 2011 | ||
| Metabolism | Rhamnose biosynthesis in mycoplasmas requires precursor glycans larger than monosaccharide. | Jordan DS, Daubenspeck JM, Dybvig K. | Mol Microbiol | 10.1111/mmi.12320 | 2013 | |
| Metabolism | Simple sequence repeats in prokaryotic genomes. | Mrazek J, Guo X, Shah A. | Proc Natl Acad Sci U S A | 10.1073/pnas.0702412104 | 2007 | |
| Cell reproduction and morphological changes in Mycoplasma capricolum. | Seto S, Miyata M. | J Bacteriol | 10.1128/jb.180.2.256-264.1998 | 1998 | ||
| Genetics | Localizing the replication origin region on the physical map of the Mycoplasma capricolum genome. | Miyata M, Wang L, Fukumura T. | J Bacteriol | 10.1128/jb.175.3.655-660.1993 | 1993 | |
| Physical mapping of the ribosomal RNA genes of Mycoplasma capricolum. | Glaser G, Amikam D, Razin S. | Nucleic Acids Res | 10.1093/nar/12.5.2421 | 1984 | ||
| The nucleotide sequence of 5S rRNA from Mycoplasma capricolum. | Hori H, Sawada M, Osawa S, Murao K, Ishikura H. | Nucleic Acids Res | 10.1093/nar/9.20.5407 | 1981 | ||
| Phylogeny | Suppression-subtractive hybridization as a strategy to identify taxon-specific sequences within the Mycoplasma mycoides Cluster: design and validation of an M. capricolum subsp. capricolum-specific PCR assay. | Maigre L, Citti C, Marenda M, Poumarat F, Tardy F. | J Clin Microbiol | 10.1128/jcm.01617-07 | 2008 | |
| Stable RNA synthesis and its control in Mycoplasma capricolum. | Glaser G, Razin A, Razin S. | Nucleic Acids Res | 10.1093/nar/9.15.3641 | 1981 | ||
| Phylogeny | Across bacterial phyla, distantly-related genomes with similar genomic GC content have similar patterns of amino acid usage. | Lightfield J, Fram NR, Ely B. | PLoS One | 10.1371/journal.pone.0017677 | 2011 | |
| Comparative geno-plasticity analysis of Mycoplasma bovis HB0801 (Chinese isolate). | Qi J, Guo A, Cui P, Chen Y, Mustafa R, Ba X, Hu C, Bai Z, Chen X, Shi L, Chen H. | PLoS One | 10.1371/journal.pone.0038239 | 2012 | ||
| Enzymology | The diversity of prokaryotic DDE transposases of the mutator superfamily, insertion specificity, and association with conjugation machineries. | Guerillot R, Siguier P, Gourbeyre E, Chandler M, Glaser P. | Genome Biol Evol | 10.1093/gbe/evu010 | 2014 | |
| Mycoplasmas (Mollicutes) have a low number of rRNA genes. | Amikam D, Glaser G, Razin S. | J Bacteriol | 10.1128/jb.158.1.376-378.1984 | 1984 | ||
| Structural insights into the extracytoplasmic thiamine-binding lipoprotein p37 of Mycoplasma hyorhinis. | Sippel KH, Robbins AH, Reutzel R, Boehlein SK, Namiki K, Goodison S, Agbandje-McKenna M, Rosser CJ, McKenna R. | J Bacteriol | 10.1128/jb.01680-08 | 2009 | ||
| Genetics | Mapping of replication initiation site in Mycoplasma capricolum genome by two-dimensional gel-electrophoretic analysis. | Miyata M, Sano K, Okada R, Fukumura T. | Nucleic Acids Res | 10.1093/nar/21.20.4816 | 1993 | |
| Genetics | The Mycoplasma conjunctivae genome sequencing, annotation and analysis. | Calderon-Copete SP, Wigger G, Wunderlin C, Schmidheini T, Frey J, Quail MA, Falquet L. | BMC Bioinformatics | 10.1186/1471-2105-10-s6-s7 | 2009 | |
| Ribosomal RNA genes in Mycoplasma. | Amikam D, Razin S, Glaser G. | Nucleic Acids Res | 10.1093/nar/10.14.4215 | 1982 | ||
| Genetics | The genome of Erysipelothrix rhusiopathiae, the causative agent of swine erysipelas, reveals new insights into the evolution of firmicutes and the organism's intracellular adaptations. | Ogawa Y, Ooka T, Shi F, Ogura Y, Nakayama K, Hayashi T, Shimoji Y. | J Bacteriol | 10.1128/jb.01500-10 | 2011 | |
| The effect of chaperonin buffering on protein evolution. | Williams TA, Fares MA. | Genome Biol Evol | 10.1093/gbe/evq045 | 2010 | ||
| Promoters of Mycoplasma capricolum ribosomal RNA operons: identical activities but different regulation in homologous and heterologous cells. | Gafny R, Hyman HC, Razin S, Glaser G. | Nucleic Acids Res | 10.1093/nar/16.1.61 | 1988 | ||
| Annotation of Protein Domains Reveals Remarkable Conservation in the Functional Make up of Proteomes Across Superkingdoms. | Nasir A, Naeem A, Khan MJ, Nicora HD, Caetano-Anolles G. | Genes (Basel) | 10.3390/genes2040869 | 2011 | ||
| Identification and functional mapping of the Mycoplasma fermentans P29 adhesin. | Leigh SA, Wise KS. | Infect Immun | 10.1128/iai.70.9.4925-4935.2002 | 2002 | ||
| RNAmmer: consistent and rapid annotation of ribosomal RNA genes. | Lagesen K, Hallin P, Rodland EA, Staerfeldt HH, Rognes T, Ussery DW. | Nucleic Acids Res | 10.1093/nar/gkm160 | 2007 | ||
| Unsupervised statistical clustering of environmental shotgun sequences. | Kislyuk A, Bhatnagar S, Dushoff J, Weitz JS. | BMC Bioinformatics | 10.1186/1471-2105-10-316 | 2009 | ||
| Metabolism | Insights into the evolution of sialic acid catabolism among bacteria. | Almagro-Moreno S, Boyd EF. | BMC Evol Biol | 10.1186/1471-2148-9-118 | 2009 | |
| Metabolism | Methylated bases in mycoplasmal DNA. | Razin A, Razin S. | Nucleic Acids Res | 10.1093/nar/8.6.1383 | 1980 | |
| Compilation of 5S rRNA and 5S rRNA gene sequences. | Specht T, Wolters J, Erdmann VA. | Nucleic Acids Res | 10.1093/nar/18.suppl.2215 | 1990 | ||
| Pathogenicity | Antimicrobial susceptibility and multilocus sequence typing of Mycoplasma capricolum subsp. capricolum. | Tatay-Dualde J, Prats-van der Ham M, de la Fe C, Paterna A, Sanchez A, Corrales JC, Contreras A, Tola S, Gomez-Martin A. | PLoS One | 10.1371/journal.pone.0174700 | 2017 | |
| Phylogeny | Differentiation of Mycoplasma species by 16S ribosomal DNA PCR and denaturing gradient gel electrophoresis fingerprinting. | McAuliffe L, Ellis RJ, Ayling RD, Nicholas RA. | J Clin Microbiol | 10.1128/jcm.41.10.4844-4847.2003 | 2003 | |
| Enzymology | Rapid detection of contagious caprine pleuropneumonia using a Mycoplasma capricolum subsp. capripneumoniae capsular polysaccharide-specific antigen detection latex agglutination test. | March JB, Gammack C, Nicholas R. | J Clin Microbiol | 10.1128/jcm.38.11.4152-4159.2000 | 2000 | |
| Genetics | Bacterial genome reduction using the progressive clustering of deletions via yeast sexual cycling. | Suzuki Y, Assad-Garcia N, Kostylev M, Noskov VN, Wise KS, Karas BJ, Stam J, Montague MG, Hanly TJ, Enriquez NJ, Ramon A, Goldgof GM, Richter RA, Vashee S, Chuang RY, Winzeler EA, Hutchison CA, Gibson DG, Smith HO, Glass JI, Venter JC. | Genome Res | 10.1101/gr.182477.114 | 2015 | |
| A study of F38-type and related mycoplasmas by mycoplasmaemia and cross-immunization tests in mice. | Kanyi Kibe M, Smith GR. | J Hyg (Lond) | 10.1017/s0022172400065062 | 1984 | ||
| Enzymology | Rapid detection of contagious bovine pleuropneumonia by a Mycoplasma mycoides subsp. mycoides SC capsular polysaccharide-specific antigen detection latex agglutination test. | March JB, Kerr K, Lema B. | Clin Diagn Lab Immunol | 10.1128/cdli.10.2.233-240.2003 | 2003 | |
| Differentiation of F38 mycoplasmas causing contagious caprine pleuropneumonia with a growth-inhibiting monoclonal antibody. | Rurangirwa FR, McGuire TC, Musoke AJ, Kibor A. | Infect Immun | 10.1128/iai.55.12.3219-3220.1987 | 1987 | ||
| Demonstration of cross-reactive antigens in F38 and related mycoplasmas by enzyme-linked immunosorbent assay (ELISA) and immunoblotting. | Kibe MK, Bidwell DE, Turp P, Smith GR. | J Hyg (Lond) | 10.1017/s002217240006232x | 1985 | ||
| Enzymology | The protein composition of Mycoplasma capricolum. | Kawauchi Y, Muto A, Osawa S | Mol Gen Genet | 10.1007/BF00332989 | 1982 | |
| Enzymology | Physical mapping of the Mycoplasma capricolum genome. | Miyata M, Wang L, Fukumura T | FEMS Microbiol Lett | 10.1016/0378-1097(91)90107-l | 1991 | |
| Phylogeny | Proposal for designation of F38-type caprine mycoplasmas as Mycoplasma capricolum subsp. capripneumoniae subsp. nov. and consequent obligatory relegation of strains currently classified as M. capricolum (Tully, Barile, Edward, Theodore, and Erno 1974) to an additional new subspecies, M. capricolum subsp. capricolum subsp. nov. | Leach RH, Erno H, MacOwan KJ | Int J Syst Bacteriol | 10.1099/00207713-43-3-603 | 1993 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #35700 | Collection of Institut Pasteur ; Curators of the CIP; CIP 104620 |
| #51158 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 32752 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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