Kingella kingae CIP 80.18 is an obligate aerobe, mesophilic, Gram-negative prokaryote that was isolated from Human, Blood.
Gram-negative rod-shaped obligate aerobe mesophilic genome sequence| @ref 20215 |
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| Domain Pseudomonadati |
| Phylum Pseudomonadota |
| Class Betaproteobacteria |
| Order Neisseriales |
| Family Neisseriaceae |
| Genus Kingella |
| Species Kingella kingae |
| Full scientific name Kingella kingae (Henriksen and Bøvre 1968) Henriksen and Bøvre 1976 (Approved Lists 1980) |
| Synonyms (1) |
| @ref | Name | Growth | Composition | Medium link | |
|---|---|---|---|---|---|
| 35054 | MEDIUM 6 - Columbia agar with 10 % horse blood | Distilled water make up to (1000.000 ml);Columbia agar (39.000 g);Horseblood (100.000 ml) | |||
| 35054 | CIP Medium 6 | Medium recipe at CIP |
| @ref | Growth | Type | Temperature (°C) | Range | |
|---|---|---|---|---|---|
| 35054 | positive | growth | 30 | mesophilic |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | - | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 35054 | catalase | - | 1.11.1.6 | |
| 68382 | cystine arylamidase | - | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 68382 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | - | from API zym | |
| 35054 | oxidase | + | ||
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 35054 | urease | - | 3.5.1.5 | |
| 68382 | valine arylamidase | - | from API zym |
| 35054 | Sample typeHuman, Blood |
| @ref | Biosafety level | Biosafety level comment | |
|---|---|---|---|
| 35054 | 1 | Risk group (French classification) |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | no | 91.70 | no |
| 125439 | motility | BacteriaNetⓘ | no | 84.90 | no |
| 125439 | gram_stain | BacteriaNetⓘ | variable | 69.20 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 98.60 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | no | 99.79 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 91.59 | yes |
| 125438 | aerobic | aerobicⓘ | yes | 54.63 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 90.94 | no |
| 125438 | thermophilic | thermophileⓘ | no | 97.61 | no |
| 125438 | flagellated | motile2+ⓘ | no | 84.00 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Genetics | Whole-Genome Sequencing Reveals Differences among Kingella kingae Strains from Carriers and Patients with Invasive Infections. | Murik O, Zeevi DA, Mann T, Kashat L, Assous MV, Megged O, Yagupsky P. | Microbiol Spectr | 10.1128/spectrum.03895-22 | 2023 | |
| The Type a and Type b Polysaccharide Capsules Predominate in an International Collection of Invasive Kingella kingae Isolates. | Porsch EA, Starr KF, Yagupsky P, St Geme JW. | mSphere | 10.1128/msphere.00060-17 | 2017 | ||
| Phylogeny | Multilocus sequence typing and rtxA toxin gene sequencing analysis of Kingella kingae isolates demonstrates genetic diversity and international clones. | Basmaci R, Yagupsky P, Ilharreborde B, Guyot K, Porat N, Chomton M, Thiberge JM, Mazda K, Bingen E, Bonacorsi S, Bidet P. | PLoS One | 10.1371/journal.pone.0038078 | 2012 | |
| Kingella kingae RtxA Cytotoxin in the Context of Other RTX Toxins. | Filipi K, Rahman WU, Osickova A, Osicka R. | Microorganisms | 10.3390/microorganisms10030518 | 2022 | ||
| Identification and characterization of an RTX toxin in the emerging pathogen Kingella kingae. | Kehl-Fie TE, St Geme JW. | J Bacteriol | 10.1128/jb.01319-06 | 2007 | ||
| Cellular fatty acid composition of Kingella species, Cardiobacterium hominis, and Eikenella corrodens. | Wallace PL, Hollis DG, Weaver RE, Moss CW. | J Clin Microbiol | 10.1128/jcm.26.8.1592-1594.1988 | 1988 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #35054 | Collection of Institut Pasteur ; Curators of the CIP; CIP 80.18 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #68382 | Automatically annotated from API zym . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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