Name: Agrobacterium agile A82
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 13538

Type strain:

Species: Agrobacterium agile

Strain Designation: A82

Culture col. no.: DSM 5891, ATCC 25651, JCM 20686, IAM 12615, IFO 15760, LMG 123, NBRC 15760, NCIMB 2207

Strain history: IAM 12615 <-- ATCC 25651 <-- R. Ahrens A82.

NCBI tax ID(s): 76979 (species)

Section

Agrobacterium agile A82 is a mesophilic Proteobacterium that was isolated from brackish water.

mesophilic
16S sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

[Ref.: #2349]	Domain	Bacteria
[Ref.: #2349]	Phylum	Proteobacteria
[Ref.: #2349]	Class	Alphaproteobacteria
[Ref.: #2349]	Order	Rhizobiales
[Ref.: #2349]	Family	Rhizobiaceae
[Ref.: #2349]	Genus	Agrobacterium
[Ref.: #2349]	Species	Agrobacterium agile
[Ref.: #2349]	Full Scientific Name	Agrobacterium agile
[Ref.: #2349]	Strain Designation	A82
[Ref.: #2349]	Type strain

Information on culture and growth conditions Culture and growth conditions

[Ref.: #2349]

Culture medium

MARINE AGAR (DSMZ Medium 123)

[Ref.: #2349]

Culture medium growth

[Ref.: #2349]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2349]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #2349]			growth	26 °C
[Ref.: #67770]			growth	25 °C

[Ref.: #2349]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: Q-9

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #2349]	Sample type/isolated from	brackish water
[Ref.: #2349]	Geographic location (country and/or sea, region)	Baltic Sea

[Ref.: #67770]	Sample type/isolated from	Brackish water
[Ref.: #67770]	Geographic location (country and/or sea, region)	Baltic Sea
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Brackish

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence D88521 (>99% sequence identity) for Pseudomonas from Microbeatlas

Aquatic Samples	4373
Soil Samples	958
Animal Samples	948
Plant Samples	159
Total Samples	6438

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #2349]	Agrobacterium agile gene for 16S rRNA, partial sequence, strain: NBRC 15760	AB680959	1462	ENA	76979 tax ID
[Ref.: #2349]	Agrobacterium agile gene for 16S rRNA, partial sequence	D88521	1348	ENA	76979 tax ID

[Ref.: #67770]	GC-content	57.1 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	58 mol%	thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #2349]

Culture collection no.

DSM 5891, ATCC 25651, JCM 20686, IAM 12615, IFO 15760, LMG 123, NBRC 15760, NCIMB 2207

References

#2349

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 5891

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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