Saccharopolyspora spinosa DSM 44228 is a spore-forming, mesophilic prokaryote that builds an aerial mycelium and was isolated from soil; sugar mill rum still.
spore-forming mesophilic genome sequence 16S sequence| @ref 20215 |
|
|
| Domain Bacillati |
| Phylum Actinomycetota |
| Class Actinomycetes |
| Order Pseudonocardiales |
| Family Pseudonocardiaceae |
| Genus Saccharopolyspora |
| Species Saccharopolyspora spinosa |
| Full scientific name Saccharopolyspora spinosa Mertz and Yao 1990 |
| @ref: | 11612 |
| multimedia content: | DSM_44228.jpg |
| multimedia.multimedia content: | https://www.dsmz.de/microorganisms/photos/DSM_44228.jpg |
| caption: | Medium 65 28°C |
| intellectual property rights: | © Leibniz-Institut DSMZ |
| manual_annotation: | 1 |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 11612 | GPHF-MEDIUM (DSMZ Medium 553) | Medium recipe at MediaDive | Name: GPHF-MEDIUM (DSMZ Medium 553) Composition: Agar 20.0 g/l Glucose 10.0 g/l Beef extract 5.0 g/l Yeast extract 5.0 g/l Casein peptone 5.0 g/l CaCl2 x 2 H2O 0.74 g/l Distilled water | ||
| 11612 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | Medium recipe at MediaDive | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water | ||
| 20023 | ISP 2 | Name: ISP 2 / Yeast Malt Agar (5265); 5265 Composition Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l Agar 15.0 g/l Preparation: Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.0 Usage: Maintenance and Taxonomy Organisms: All Actinomycetes | |||
| 20023 | ISP 3 | Name: ISP 3; 5315 Composition Dog oat flakes 20.0 g/l Trace element solution (5314) 2.5 ml/l Agar 18.0 g/l Preparation: Oat flakes are cooked for 20 minutes, trace element solution and agar are added (in the case of non rolled oat flakes the suspension has to bee filtrated). Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.8 Usage: Maintenance and taxonomy (e.g. SEM As liquid medium for metabolite production) Organisms: All Actinomycetes Trace element solution 5314 Name: Trace element solution 5314; 5314 Composition CaCl2 x H2O 3.0 g/l Fe-III-citrate 1.0 g/l MnSO4 0.2 g/l ZnCl2 0.1 g/l CuSO4 x 5 H2O 0.025 g/l Sodium tetra borate 0.2 g/l CoCl2 x 6 H2O 0.004 g/l Sodium molybdate 0.01 g/l Preparation: Use double destillated water. Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Trace element solution for different media Organisms: | |||
| 20023 | ISP 4 | Name: ISP 4; DSM 547 Solution I: Difco soluble starch, 10.0 g. Make a paste of the starch with a small amount of cold distilled water and bring to a volume of 500 ml. Solution II: CaCO3 2.0 g K2HPO4 (anhydrous) 1.0 g MgSO4 x 7 H2O 1.0 g NaCl 1.0 g (NH4)2SO4 2.0 g Distilled water 500.0 ml Trace salt solution (see below) 1.0 ml The pH should be between 7.0 and 7.4. Do not adjust if it is within this range. Mix solutions I and II together. Add 20.0 g agar. Liquify agar by steaming at 100°C for 10 to 20 min. Trace element solution: FeSO4 x 7 H2O 0.1 g MnCl2 x 4 H2O 0.1 g ZnSO4 x 7 H2O 0.1 g Distilled water 100.0 ml | |||
| 20023 | ISP 5 | Name: ISP 5 (5323) Composition L-Asparagine 1.0 g/l Glycerol 10.0 g/l K2HPO4 1.0 g/l Salt solution (see preparation) 1.0 ml/l Agar 20.0 g/l Preparation: Salt solution 1.0 g FeSO4 x 7 H2O 1.0 g MnCl2 x 4 H2O 1.0 g ZNSO4 x 7 H2O in 100 ml water Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.2 Usage: Maintenance and taxonomy Organisms: All Actinomycetes | |||
| 20023 | ISP 6 | Name: ISP 6 (5318) Composition Peptone 15.0 g/l Proteose peptose 5.0 g/l Ferric ammonium citrate 0.5 g/l Sodium glycerophosphate 1.0 g/l Sodium thiosulfate 0.08 g/l Yeast extract 1.0 g/l Agar 15.0 g/l Sterilisation: 20 minutes at 121°C pH before sterilisation: Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 20023 | ISP 7 | Name: ISP 7 (5322) Composition Glycerol 15.0 g/l L-Tyrosine 0.5 g/l L-Asparagine 1.0 g/l K2HPO4 0.5 g/l NaCl 0.5 g/l FeSO4 x 7 H2O 0.01 g/l Trace element solution 5343 1.0 ml/l Agar 20.0 Sterilisation: 20 minutes at 121°C pH before sterilisation: 7.3 Usage: Production of melanoid pigments Organisms: All Actinomycetes | |||
| 11612 | TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) | Medium recipe at MediaDive | Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water |
| @ref | Oxygen tolerance | Confidence | |
|---|---|---|---|
| 125439 | aerobe | 98.3 |
| @ref | Salt | Growth | Tested relation | Concentration | |
|---|---|---|---|---|---|
| 20023 | NaCl | positive | maximum | 5 % |
| 67770 | Observationquinones: MK-9(H4), MK-9(H6) |
| @ref | Chebi-ID | Metabolite | Utilization activity | |
|---|---|---|---|---|
| 20023 | 22599 ChEBI | arabinose | - | |
| 68368 | 29016 ChEBI | arginine | + | from API 20E |
| 20023 | 62968 ChEBI | cellulose | - | |
| 68368 | 16947 ChEBI | citrate | + | from API 20E |
| 20023 | 28757 ChEBI | fructose | - | |
| 68368 | 5291 ChEBI | gelatin | + | from API 20E |
| 20023 | 17234 ChEBI | glucose | - | |
| 68368 | 25094 ChEBI | lysine | - | from API 20E |
| 20023 | 29864 ChEBI | mannitol | - | |
| 20023 | 17268 ChEBI | myo-inositol | - | |
| 68368 | 18257 ChEBI | ornithine | + | from API 20E |
| 20023 | 16634 ChEBI | raffinose | - | |
| 20023 | 26546 ChEBI | rhamnose | - | |
| 20023 | 17992 ChEBI | sucrose | - | |
| 68368 | 27897 ChEBI | tryptophan | - | from API 20E |
| 68368 | 16199 ChEBI | urea | + | from API 20E |
| 20023 | 18222 ChEBI | xylose | - |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68382 | alpha-chymotrypsin | - | 3.4.21.1 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68382 | alpha-glucosidase | - | 3.2.1.20 | from API zym |
| 68368 | arginine dihydrolase | + | 3.5.3.6 | from API 20E |
| 68382 | beta-galactosidase | - | 3.2.1.23 | from API zym |
| 68368 | beta-galactosidase | + | 3.2.1.23 | from API 20E |
| 68382 | beta-glucosidase | - | 3.2.1.21 | from API zym |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68382 | cystine arylamidase | + | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | - | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68368 | gelatinase | + | from API 20E | |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68382 | lipase (C 14) | - | from API zym | |
| 68368 | lysine decarboxylase | - | 4.1.1.18 | from API 20E |
| 68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API zym |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 68368 | ornithine decarboxylase | + | 4.1.1.17 | from API 20E |
| 68382 | trypsin | + | 3.4.21.4 | from API zym |
| 68368 | tryptophan deaminase | - | 4.1.99.1 | from API 20E |
| 68368 | urease | + | 3.5.1.5 | from API 20E |
| 68382 | valine arylamidase | + | from API zym |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | phenylacetate degradation (aerobic) | 100 | 5 of 5 | ||
| 66794 | adipate degradation | 100 | 2 of 2 | ||
| 66794 | valine metabolism | 100 | 9 of 9 | ||
| 66794 | Entner Doudoroff pathway | 100 | 10 of 10 | ||
| 66794 | aspartate and asparagine metabolism | 100 | 9 of 9 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | methylglyoxal degradation | 100 | 5 of 5 | ||
| 66794 | daunorubicin biosynthesis | 100 | 9 of 9 | ||
| 66794 | cardiolipin biosynthesis | 100 | 7 of 7 | ||
| 66794 | ketogluconate metabolism | 100 | 8 of 8 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | biotin biosynthesis | 100 | 4 of 4 | ||
| 66794 | chorismate metabolism | 100 | 9 of 9 | ||
| 66794 | L-lactaldehyde degradation | 100 | 3 of 3 | ||
| 66794 | propanol degradation | 100 | 7 of 7 | ||
| 66794 | glycine betaine biosynthesis | 100 | 5 of 5 | ||
| 66794 | ethylmalonyl-CoA pathway | 100 | 5 of 5 | ||
| 66794 | aminopropanol phosphate biosynthesis | 100 | 2 of 2 | ||
| 66794 | formaldehyde oxidation | 100 | 3 of 3 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | butanoate fermentation | 100 | 4 of 4 | ||
| 66794 | threonine metabolism | 100 | 10 of 10 | ||
| 66794 | ethanol fermentation | 100 | 2 of 2 | ||
| 66794 | acetate fermentation | 100 | 4 of 4 | ||
| 66794 | allantoin degradation | 100 | 9 of 9 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | enterobactin biosynthesis | 100 | 3 of 3 | ||
| 66794 | taurine degradation | 100 | 1 of 1 | ||
| 66794 | suberin monomers biosynthesis | 100 | 2 of 2 | ||
| 66794 | palmitate biosynthesis | 100 | 22 of 22 | ||
| 66794 | vitamin K metabolism | 100 | 5 of 5 | ||
| 66794 | dTDPLrhamnose biosynthesis | 100 | 8 of 8 | ||
| 66794 | citric acid cycle | 92.86 | 13 of 14 | ||
| 66794 | leucine metabolism | 92.31 | 12 of 13 | ||
| 66794 | phenylalanine metabolism | 92.31 | 12 of 13 | ||
| 66794 | proline metabolism | 90.91 | 10 of 11 | ||
| 66794 | pentose phosphate pathway | 90.91 | 10 of 11 | ||
| 66794 | propionate fermentation | 90 | 9 of 10 | ||
| 66794 | 4-hydroxyphenylacetate degradation | 90 | 9 of 10 | ||
| 66794 | glutamate and glutamine metabolism | 89.29 | 25 of 28 | ||
| 66794 | 4-hydroxymandelate degradation | 88.89 | 8 of 9 | ||
| 66794 | NAD metabolism | 88.89 | 16 of 18 | ||
| 66794 | molybdenum cofactor biosynthesis | 88.89 | 8 of 9 | ||
| 66794 | serine metabolism | 88.89 | 8 of 9 | ||
| 66794 | CO2 fixation in Crenarchaeota | 88.89 | 8 of 9 | ||
| 66794 | glycolysis | 88.24 | 15 of 17 | ||
| 66794 | isoleucine metabolism | 87.5 | 7 of 8 | ||
| 66794 | flavin biosynthesis | 86.67 | 13 of 15 | ||
| 66794 | pyrimidine metabolism | 86.67 | 39 of 45 | ||
| 66794 | aclacinomycin biosynthesis | 85.71 | 6 of 7 | ||
| 66794 | heme metabolism | 85.71 | 12 of 14 | ||
| 66794 | reductive acetyl coenzyme A pathway | 85.71 | 6 of 7 | ||
| 66794 | glutathione metabolism | 85.71 | 12 of 14 | ||
| 66794 | vitamin B1 metabolism | 84.62 | 11 of 13 | ||
| 66794 | purine metabolism | 84.04 | 79 of 94 | ||
| 66794 | degradation of sugar acids | 84 | 21 of 25 | ||
| 66794 | glycolate and glyoxylate degradation | 83.33 | 5 of 6 | ||
| 66794 | methionine metabolism | 80.77 | 21 of 26 | ||
| 66794 | 3-chlorocatechol degradation | 80 | 4 of 5 | ||
| 66794 | gallate degradation | 80 | 4 of 5 | ||
| 66794 | factor 420 biosynthesis | 80 | 4 of 5 | ||
| 66794 | peptidoglycan biosynthesis | 80 | 12 of 15 | ||
| 66794 | glycogen metabolism | 80 | 4 of 5 | ||
| 66794 | alanine metabolism | 79.31 | 23 of 29 | ||
| 66794 | tryptophan metabolism | 78.95 | 30 of 38 | ||
| 66794 | tyrosine metabolism | 78.57 | 11 of 14 | ||
| 66794 | photosynthesis | 78.57 | 11 of 14 | ||
| 66794 | d-mannose degradation | 77.78 | 7 of 9 | ||
| 66794 | urea cycle | 76.92 | 10 of 13 | ||
| 66794 | vitamin B12 metabolism | 76.47 | 26 of 34 | ||
| 66794 | toluene degradation | 75 | 3 of 4 | ||
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | ||
| 66794 | gluconeogenesis | 75 | 6 of 8 | ||
| 66794 | sulfopterin metabolism | 75 | 3 of 4 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 75 | 6 of 8 | ||
| 66794 | cyclohexanol degradation | 75 | 3 of 4 | ||
| 66794 | lipid metabolism | 74.19 | 23 of 31 | ||
| 66794 | histidine metabolism | 72.41 | 21 of 29 | ||
| 66794 | tetrahydrofolate metabolism | 71.43 | 10 of 14 | ||
| 66794 | ubiquinone biosynthesis | 71.43 | 5 of 7 | ||
| 66794 | degradation of pentoses | 71.43 | 20 of 28 | ||
| 66794 | non-pathway related | 71.05 | 27 of 38 | ||
| 66794 | coenzyme M biosynthesis | 70 | 7 of 10 | ||
| 66794 | myo-inositol biosynthesis | 70 | 7 of 10 | ||
| 66794 | phenol degradation | 70 | 14 of 20 | ||
| 66794 | isoprenoid biosynthesis | 69.23 | 18 of 26 | ||
| 66794 | degradation of sugar alcohols | 68.75 | 11 of 16 | ||
| 66794 | ascorbate metabolism | 68.18 | 15 of 22 | ||
| 66794 | oxidative phosphorylation | 67.03 | 61 of 91 | ||
| 66794 | acetyl CoA biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | (5R)-carbapenem carboxylate biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | cyanate degradation | 66.67 | 2 of 3 | ||
| 66794 | degradation of hexoses | 66.67 | 12 of 18 | ||
| 66794 | methane metabolism | 66.67 | 2 of 3 | ||
| 66794 | octane oxidation | 66.67 | 2 of 3 | ||
| 66794 | selenocysteine biosynthesis | 66.67 | 4 of 6 | ||
| 66794 | lysine metabolism | 66.67 | 28 of 42 | ||
| 66794 | IAA biosynthesis | 66.67 | 2 of 3 | ||
| 66794 | arginine metabolism | 66.67 | 16 of 24 | ||
| 66794 | cysteine metabolism | 66.67 | 12 of 18 | ||
| 66794 | acetoin degradation | 66.67 | 2 of 3 | ||
| 66794 | polyamine pathway | 65.22 | 15 of 23 | ||
| 66794 | metabolism of disaccharids | 63.64 | 7 of 11 | ||
| 66794 | C4 and CAM-carbon fixation | 62.5 | 5 of 8 | ||
| 66794 | lipoate biosynthesis | 60 | 3 of 5 | ||
| 66794 | elloramycin biosynthesis | 60 | 3 of 5 | ||
| 66794 | 3-phenylpropionate degradation | 60 | 9 of 15 | ||
| 66794 | starch degradation | 60 | 6 of 10 | ||
| 66794 | carotenoid biosynthesis | 59.09 | 13 of 22 | ||
| 66794 | androgen and estrogen metabolism | 56.25 | 9 of 16 | ||
| 66794 | sulfate reduction | 53.85 | 7 of 13 | ||
| 66794 | phenylpropanoid biosynthesis | 53.85 | 7 of 13 | ||
| 66794 | bile acid biosynthesis, neutral pathway | 52.94 | 9 of 17 | ||
| 66794 | ribulose monophosphate pathway | 50 | 1 of 2 | ||
| 66794 | glycine metabolism | 50 | 5 of 10 | ||
| 66794 | dolichol and dolichyl phosphate biosynthesis | 50 | 1 of 2 | ||
| 66794 | mannosylglycerate biosynthesis | 50 | 1 of 2 | ||
| 66794 | carnitine metabolism | 50 | 4 of 8 | ||
| 66794 | pantothenate biosynthesis | 50 | 3 of 6 | ||
| 66794 | phenylmercury acetate degradation | 50 | 1 of 2 | ||
| 66794 | vitamin E metabolism | 50 | 2 of 4 | ||
| 66794 | kanosamine biosynthesis II | 50 | 1 of 2 | ||
| 66794 | quinate degradation | 50 | 1 of 2 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 50 | 6 of 12 | ||
| 66794 | grixazone biosynthesis | 50 | 1 of 2 | ||
| 66794 | resorcinol degradation | 50 | 1 of 2 | ||
| 66794 | phosphatidylethanolamine bioynthesis | 46.15 | 6 of 13 | ||
| 66794 | cholesterol biosynthesis | 45.45 | 5 of 11 | ||
| 66794 | lipid A biosynthesis | 44.44 | 4 of 9 | ||
| 66794 | nitrate assimilation | 44.44 | 4 of 9 | ||
| 66794 | benzoyl-CoA degradation | 42.86 | 3 of 7 | ||
| 66794 | creatinine degradation | 40 | 2 of 5 | ||
| 66794 | bacilysin biosynthesis | 40 | 2 of 5 | ||
| 66794 | arachidonate biosynthesis | 40 | 2 of 5 | ||
| 66794 | metabolism of amino sugars and derivatives | 40 | 2 of 5 | ||
| 66794 | cellulose degradation | 40 | 2 of 5 | ||
| 66794 | hydrogen production | 40 | 2 of 5 | ||
| 66794 | dolichyl-diphosphooligosaccharide biosynthesis | 36.36 | 4 of 11 | ||
| 66794 | vitamin B6 metabolism | 36.36 | 4 of 11 | ||
| 66794 | d-xylose degradation | 36.36 | 4 of 11 | ||
| 66794 | methanogenesis from CO2 | 33.33 | 4 of 12 | ||
| 66794 | sulfoquinovose degradation | 33.33 | 1 of 3 | ||
| 66794 | arachidonic acid metabolism | 33.33 | 6 of 18 | ||
| 66794 | sphingosine metabolism | 33.33 | 2 of 6 | ||
| 66794 | lactate fermentation | 25 | 1 of 4 | ||
| 66794 | catecholamine biosynthesis | 25 | 1 of 4 | ||
| 66794 | alginate biosynthesis | 25 | 1 of 4 | ||
| 66794 | CMP-KDO biosynthesis | 25 | 1 of 4 | ||
| 66794 | chlorophyll metabolism | 22.22 | 4 of 18 |
| Cat1 | Cat2 | Cat3 | |
|---|---|---|---|
| #Engineered | #Industrial | #Industrial production | |
| #Environmental | #Terrestrial | #Soil |
Global distribution of 16S sequence LC149867 (>99% sequence identity) for Saccharopolyspora spinosa from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|
| 124043 | ASM4920041v1 assembly for Saccharopolyspora spinosa NRRL 18395 | complete | 994479 | 98.8 | ||
| 67770 | ASM284647v1 assembly for Saccharopolyspora spinosa DSM 44228 | contig | 60894 | 78.64 | ||
| 67770 | ASM19415v1 assembly for Saccharopolyspora spinosa NRRL 18395 | scaffold | 994479 | 54.56 |
| @ref | GC-content (mol%) | Method | |
|---|---|---|---|
| 67770 | 67.94 | genome sequence analysis |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | spore_formation | BacteriaNetⓘ | yes | 95.50 | no |
| 125439 | motility | BacteriaNetⓘ | no | 95.30 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 98.60 | no |
| 125439 | oxygen_tolerance | BacteriaNetⓘ | aerobe | 98.30 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 90.42 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 96.81 | no |
| 125438 | aerobic | aerobicⓘ | yes | 89.10 | no |
| 125438 | spore-forming | spore-formingⓘ | yes | 86.07 | no |
| 125438 | thermophilic | thermophileⓘ | no | 96.50 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 89.10 | no |
| Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|
| iCASRED, a scarless DNA editing tool in E. coli for high-efficiency engineering of natural product biosynthetic gene clusters. | Zheng G, Xu J, Liu H, Hua H, Zimin AA, Wang W, Lu Y. | Synth Syst Biotechnol | 10.1016/j.synbio.2025.03.008 | 2025 | |
| Improvement of the ability to produce spinosad in Saccharopolyspora spinosa through the acquisition of drug resistance and genome shuffling | Wang H, Xue W, He YM, Peng RH, Yao QH. | Ann Microbiol | 10.1007/s13213-014-0917-9 | 2015 | |
| Comparative transcriptomic analysis of two Saccharopolyspora spinosa strains reveals the relationships between primary metabolism and spinosad production. | Zhang Y, Liu X, Yin T, Li Q, Zou Q, Huang K, Guo D, Zhang X. | Sci Rep | 10.1038/s41598-021-94251-z | 2021 | |
| Genome-scale metabolic network reconstruction of Saccharopolyspora spinosa for spinosad production improvement. | Wang X, Zhang C, Wang M, Lu W. | Microb Cell Fact | 10.1186/1475-2859-13-41 | 2014 | |
| High Level of Spinosad Production in the Heterologous Host Saccharopolyspora erythraea. | Huang J, Yu Z, Li MH, Wang JD, Bai H, Zhou J, Zheng YG. | Appl Environ Microbiol | 10.1128/aem.00618-16 | 2016 | |
| Suitable extracellular oxidoreduction potential inhibit rex regulation and effect central carbon and energy metabolism in Saccharopolyspora spinosa. | Zhang X, Xue C, Zhao F, Li D, Yin J, Zhang C, Caiyin Q, Lu W. | Microb Cell Fact | 10.1186/s12934-014-0098-z | 2014 | |
| Use of direct-infusion electrospray mass spectrometry to guide empirical development of improved conditions for expression of secondary metabolites from actinomycetes. | Zahn JA, Higgs RE, Hilton MD. | Appl Environ Microbiol | 10.1128/aem.67.1.377-386.2001 | 2001 | |
| Genome and characteristics of Arthrobacter globiformis AZ cluster phage London. | Beyer AR, Hatke Hughes HL, Flowers JS, Bullock J, Daniels DT, Drew M, Lee-Mayes Q, Marshall BM, Remson V, Thomas M. | Microbiol Resour Announc | 10.1128/mra.00819-23 | 2023 | |
| Engineering the TetR-family transcriptional regulator XNR_0706 to enhance heterologous spinosad production in Streptomyces albus B4 chassis. | Cui X, Tang H, Wang W, Wei W, Wu J, Ye BC. | Synth Syst Biotechnol | 10.1016/j.synbio.2024.08.008 | 2025 | |
| A Novel Pathway for Biosynthesis of the Herbicidal Phosphonate Natural Product Phosphonothrixin Is Widespread in Actinobacteria. | Bown L, Hirota R, Goettge MN, Cui J, Krist DT, Zhu L, Giurgiu C, van der Donk WA, Ju KS, Metcalf WW. | J Bacteriol | 10.1128/jb.00485-22 | 2023 | |
| Actinomycetes as Producers of Biologically Active Terpenoids: Current Trends and Patents. | Tarasova EV, Luchnikova NA, Grishko VV, Ivshina IB. | Pharmaceuticals (Basel) | 10.3390/ph16060872 | 2023 | |
| A New Medium for Improving Spinosad Production by Saccharopolyspora spinosa. | Guojun Y, Yuping H, Yan J, Kaichun L, Haiyang X. | Jundishapur J Microbiol | 10.5812/jjm.16765 | 2016 | |
| Application Potential of Trichoderma in the Degradation of Phenolic Acid-Modified Chitosan. | Swiontek Brzezinska M, Kaczmarek-Szczepanska B, Dabrowska GB, Michalska-Sionkowska M, Dembinska K, Richert A, Pejchalova M, Kumar SB, Kalwasinska A. | Foods | 10.3390/foods12193669 | 2023 | |
| Chemical entrapment and killing of insects by bacteria. | Ho LK, Daniel-Ivad M, Jeedigunta SP, Li J, Iliadi KG, Boulianne GL, Hurd TR, Smibert CA, Nodwell JR. | Nat Commun | 10.1038/s41467-020-18462-0 | 2020 | |
| Molecular evolution of the members of the Snq2/Pdr18 subfamily of Pdr transporters in the Hemiascomycete yeasts. | Dias PJ. | FEMS Yeast Res | 10.1093/femsyr/foaf026 | 2025 | |
| Differential proteomic profiling reveals regulatory proteins and novel links between primary metabolism and spinosad production in Saccharopolyspora spinosa. | Yang Q, Ding X, Liu X, Liu S, Sun Y, Yu Z, Hu S, Rang J, He H, He L, Xia L. | Microb Cell Fact | 10.1186/1475-2859-13-27 | 2014 | |
| Distinct Taphrina strains from the phyllosphere of birch exhibiting a range of witches' broom disease symptoms. | Christita M, Sipila TP, Auzane A, Overmyer K. | Environ Microbiol | 10.1111/1462-2920.16037 | 2022 | |
| Characterization of a rifampin-inactivating glycosyltransferase from a screen of environmental actinomycetes. | Spanogiannopoulos P, Thaker M, Koteva K, Waglechner N, Wright GD. | Antimicrob Agents Chemother | 10.1128/aac.01166-12 | 2012 | |
| Engineering the Erythromycin-Producing Strain Saccharopolyspora erythraea HOE107 for the Heterologous Production of Polyketide Antibiotics. | Lu J, Long Q, Zhao Z, Chen L, He W, Hong J, Liu K, Wang Y, Pang X, Deng Z, Tao M. | Front Microbiol | 10.3389/fmicb.2020.593217 | 2020 | |
| Mangrove rare actinobacteria: taxonomy, natural compound, and discovery of bioactivity. | Azman AS, Othman I, Velu SS, Chan KG, Lee LH. | Front Microbiol | 10.3389/fmicb.2015.00856 | 2015 | |
| Cloning and analysis of the planosporicin lantibiotic biosynthetic gene cluster of Planomonospora alba. | Sherwood EJ, Hesketh AR, Bibb MJ. | J Bacteriol | 10.1128/jb.02291-12 | 2013 | |
| In vitro characterization of the enzymes involved in TDP-D-forosamine biosynthesis in the spinosyn pathway of Saccharopolyspora spinosa. | Hong L, Zhao Z, Melancon CE, Zhang H, Liu HW. | J Am Chem Soc | 10.1021/ja0771383 | 2008 | |
| Characterization of the maize lipoxygenase gene family in relation to aflatoxin accumulation resistance. | Ogunola OF, Hawkins LK, Mylroie E, Kolomiets MV, Borrego E, Tang JD, Williams WP, Warburton ML. | PLoS One | 10.1371/journal.pone.0181265 | 2017 | |
| Saccharopolyspora Species: Laboratory Maintenance and Enhanced Production of Secondary Metabolites. | Dhakal D, Pokhrel AR, Jha AK, Thuan NH, Sohng JK | Curr Protoc Microbiol | 10.1002/cpmc.21 | 2017 | |
| Characterization of the chromosomal integration of Saccharopolyspora plasmid pCM32 and its application to improve production of spinosyn in Saccharopolyspora spinosa. | Chen J, Xia H, Dang F, Xu Q, Li W, Qin Z | Appl Microbiol Biotechnol | 10.1007/s00253-015-6871-z | 2015 | |
| Optimization of Culture Medium for Maximal Production of Spinosad Using an Artificial Neural Network - Genetic Algorithm Modeling. | Lan Z, Zhao C, Guo W, Guan X, Zhang X | J Mol Microbiol Biotechnol | 10.1159/000381312 | 2015 | |
| Four-stage dissolved oxygen strategy based on multi-scale analysis for improving spinosad yield by Saccharopolyspora spinosa ATCC49460. | Bai Y, Zhou PP, Fan P, Zhu YM, Tong Y, Wang HB, Yu LJ | Microb Biotechnol | 10.1111/1751-7915.12264 | 2015 | |
| Switching antibiotics production on and off in actinomycetes by an IclR family transcriptional regulator from Streptomyces peucetius ATCC 27952. | Chaudhary AK, Singh B, Maharjan S, Jha AK, Kim BG, Sohng JK | J Microbiol Biotechnol | 10.4014/jmb.1403.03026 | 2014 | |
| Genome sequence of the Spinosyns-producing bacterium Saccharopolyspora spinosa NRRL 18395. | Pan Y, Yang X, Li J, Zhang R, Hu Y, Zhou Y, Wang J, Zhu B | J Bacteriol | 10.1128/JB.00344-11 | 2011 | |
| Analysis of a 108-kb region of the Saccharopolyspora spinosa genome covering the obscurin polyketide synthase locus. | Zirkle R, Black TA, Gorlach J, Ligon JM, Molnar I | DNA Seq | 10.1080/1042517042000208167 | 2004 | |
| Saccharopolyspora hattusasensis sp. nov., isolated from soil. | Veyisoglu A, Saygin H, Tatar D, Bektas KI, Sahin N | Antonie Van Leeuwenhoek | 10.1007/s10482-017-0921-8 | 2017 | |
| Saccharopolyspora griseoalba sp. nov., a novel actinomycete isolated from the Dead Sea. | Jiang Y, Wei X, Chen X, Jiang Y, Xue Q, Lai H, Jiang C | Antonie Van Leeuwenhoek | 10.1007/s10482-016-0763-9 | 2016 | |
| Saccharopolyspora phatthalungensis sp. nov., isolated from rhizosphere soil of Hevea brasiliensis. | Duangmal K, Mingma R, Thamchaipenet A, Matsumoto A, Takahashi Y | Int J Syst Evol Microbiol | 10.1099/ijs.0.018275-0 | 2009 | |
| Saccharopolyspora tripterygii sp. nov., an endophytic actinomycete isolated from the stem of Tripterygium hypoglaucum. | Li J, Zhao GZ, Qin S, Huang HY, Zhu WY, Xu LH, Li WJ | Int J Syst Evol Microbiol | 10.1099/ijs.0.011734-0 | 2009 | |
| Saccharopolyspora antimicrobica sp. nov., an actinomycete from soil. | Yuan LJ, Zhang YQ, Guan Y, Wei YZ, Li QP, Yu LY, Li WJ, Zhang YQ | Int J Syst Evol Microbiol | 10.1099/ijs.0.65532-0 | 2008 |
| #11612 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 44228 |
| #20023 | Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig . |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68368 | Automatically annotated from API 20E . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
You found an error in BacDive? Please tell us about it!
Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.
Successfully sent
If you want to cite this particular strain cite the following doi:
https://doi.org/10.13145/bacdive13455.20251217.10
When using BacDive for research please cite the following paper
BacDive in 2025: the core database for prokaryotic strain data