Tenacibaculum litoreum (KCCM 42115, JCM 13039, CL-TF13)

Name: Tenacibaculum litoreum (KCCM 42115, JCM 13039, CL-TF13)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 134170

Type strain

Strain Designation CL-TF13

Culture col. no. KCCM 42115 JCM 13039 CL-TF13

NCBI tax ID(s) 321269

Special Collections JCM Literature strains

Links

Tenacibaculum litoreum CL-TF13 is an aerobe, Gram-negative, motile prokaryote that was isolated from tidal flat sediment.

Gram-negative motile rod-shaped aerobe 16S sequence

Name and taxonomic classification

SI-ID 291015

JCM 13039

@ref 20215

Last LPSN update 2025-12-16 10:01:59

Domain Pseudomonadati

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Flavobacteriaceae

Genus Tenacibaculum

Species Tenacibaculum litoreum

Full scientific name Tenacibaculum litoreum Choi et al. 2006

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility	Flagellum arrangement
31680	negative	02-35 µm	0.3-0.5 µm	rod-shaped		gliding

Pigmentation

31680

Productionyes

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
31680	positive	growth	05-40
31680	positive	optimum	35-40
67770	positive	growth	30	mesophilic

Culture pH

@ref	Ability	Type	PH	PH range
31680	positive	optimum	7
31680	positive	growth	06-10	alkaliphile

Physiology and metabolism

Oxygen tolerance

31680

Oxygen toleranceaerobe

Spore formation

31680

Spore formationno

Halophily

@ref	Salt	Growth	Tested relation	Concentration
31680	NaCl	positive	growth	03-05 %
31680	NaCl	positive	optimum	03-05 %

Observation

@ref	Observation
31680	aggregates in chains
67770	quinones: MK-6

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
31680	29016 ChEBI	arginine	+	carbon source
31680	17632 ChEBI	nitrate	+	reduction
31680	18257 ChEBI	ornithine	+	carbon source
31680	26271 ChEBI	proline	+	carbon source

Enzymes

@ref	Value	Activity	Ec
31680	catalase	+	1.11.1.6
31680	cytochrome oxidase	+	1.9.3.1
31680	gelatinase	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Tidal flat
#Environmental	#Terrestrial	#Sediment

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
31680	tidal flat sediment
67770	Tidal flat sediment in Ganghwa	Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence AY962294 (>99% sequence identity) for Tenacibaculum litoreum from Microbeatlas

Aquatic Samples	1454
Soil Samples	22
Animal Samples	184
Plant Samples	5
Total Samples	1665

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
31680	Tenacibaculum litoreum strain CL-TF13 16S ribosomal RNA gene, partial sequence	AY962294	1446		321269

GC content

@ref	GC-content (mol%)	Method
31680	30
67770	30	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Tenacibaculum crassostreae sp. nov., isolated from the Pacific oyster, Crassostrea gigas.	Lee YS, Baik KS, Park SY, Kim EM, Lee DH, Kahng HY, Jeon CO, Jung JS	Int J Syst Evol Microbiol	10.1099/ijs.0.006866-0	2009
Phylogeny	Tenacibaculum litoreum sp. nov., isolated from tidal flat sediment.	Choi DH, Kim YG, Hwang CY, Yi H, Chun J, Cho BC	Int J Syst Evol Microbiol	10.1099/ijs.0.64044-0	2006

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#31680	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27957 (see below)
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Tenacibaculum litoreum (KCCM 42115, JCM 13039, CL-TF13)

Name and taxonomic classification

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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