Name: Dialister propionicifaciens AIP 26.04
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 134144

Type strain:

Species: Dialister propionicifaciens

Culture col. no.: AIP 26.04, CIP 108336, CCUG 49291, ADV 1053.03, JCM 17568, AIP 26-04

Strain history: CIP <- 2004, J.P. Carlier, Inst. Pasteur, Paris, France: strain AIP 26-04 <- H. Marchandin, Montpellier Hosp., Montpellier, France: strain ADV 1053.03

NCBI tax ID(s): 308994 (species)

SI-ID 281444

CCUG 49291, CIP 108336, CCUG 108582, JCM 17568

Other strains from Dialister propionicifaciens

D. propionicifaciens CIP 108582, ADV 3202.03, AIP 126-04

Section

Dialister propionicifaciens AIP 26.04 is an anaerobe, mesophilic, Gram-negative bacterium that was isolated from Human wound,89-yr-old man,pressure ulcer,sacrum.

Gram-negative
ovoid-shaped
anaerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Negativicutes*
	Order	*Veillonellales*
	Family	*Veillonellaceae*
	Genus	*Dialister*
	Species	**Dialister propionicifaciens**
	Full Scientific Name (LPSN)	Dialister propionicifaciens Jumas-Bilak et al. 2005

Information on morphological and physiological properties Morphology

[Ref.: #31511]	Gram stain	negative
[Ref.: #121964]	Gram stain	negative

[Ref.: #31511]	Cell length	0.45 µm

[Ref.: #31511]	Cell width	0.3 µm

[Ref.: #31511]	Cell shape	ovoid-shaped
[Ref.: #121964]	Cell shape	rod-shaped

[Ref.: #31511]	Motility	no
[Ref.: #121964]	Motility	no

[Ref.: #58497]

Incubation period

3 days

[Ref.: #31511]

Pigment production

Information on culture and growth conditions Culture and growth conditions

[Ref.: #33947]

Culture medium

MEDIUM 603 - for Helicobacter ganmani

[Ref.: #33947]

Culture medium growth

[Ref.: #33947]

Culture medium composition

expand / minimize

[Ref.: #121964]

Culture medium

CIP Medium 603

[Ref.: #121964]

Culture medium growth

[Ref.: #121964]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #33947]	growth	37 °C
[Ref.: #58497]	growth	37 °C
[Ref.: #67770]	growth	37 °C
[Ref.: #121964]	growth	37 °C

[Ref.: #33947]	Temperature range	mesophilic
[Ref.: #58497]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #121964]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #31511]	Oxygen tolerance	anaerobe
[Ref.: #58497]	Oxygen tolerance	anaerobe

[Ref.: #31511]

Ability of spore formation

[Ref.: #31511]

Observation

aggregates in clumps

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #31511]	acetate ChEBI	+	carbon source
[Ref.: #31511]	lactate ChEBI	+	carbon source
[Ref.: #121964]	nitrate ChEBI	-	reduction
[Ref.: #121964]	nitrite ChEBI	-	reduction
[Ref.: #31511]	propionate ChEBI	+	carbon source
[Ref.: #31511]	succinate ChEBI	+	carbon source

	Metabolite production	Metabolite	Production
[Ref.: #121964]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #121964]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #121964]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #121964]	gelatinase	-
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #121964]	oxidase	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #121964]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #121964]	11100	-	-	+	+	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #58497]	Sample type/isolated from	Human wound,89-yr-old man,pressure ulcer,sacrum
[Ref.: #58497]	Sampling date	2003
[Ref.: #58497]	Geographic location (country and/or sea, region)	Montpellier
[Ref.: #58497]	Country	France
[Ref.: #58497]	Country ISO 3 Code	FRA
[Ref.: #58497]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Human clinical sample (sacral pressure ulcer)

[Ref.: #121964]	Sample type/isolated from	Human, Eschar
[Ref.: #121964]	Geographic location (country and/or sea, region)	Montpellier
[Ref.: #121964]	Country	France
[Ref.: #121964]	Country ISO 3 Code	FRA
[Ref.: #121964]	Continent	Europe
[Ref.: #121964]	Isolation date	2003
* marker position based on {}

Isolation sources categories

#Host Body-Site	#Other	#Bone
#Host	#Human	#Male
#Host Body-Site	#Other	#Thoracic segment
#Host Body-Site	#Other	#Wound

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AY850119 (>99% sequence identity) for Dialister propionicifaciens subclade from Microbeatlas

Aquatic Samples	2321
Soil Samples	1077
Animal Samples	98987
Plant Samples	512
Total Samples	102897

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #121964]

Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #31511]	Dialister propionicifaciens strain ADV 1053.03 16S ribosomal RNA gene, partial sequence	AY850119	1396	GenBank	308994 tax ID
[Ref.: #67770]	Dialister propionicifaciens gene for 16S ribosomal RNA, partial sequence	AB626634	1465	ENA	308994 tax ID

Availability in culture collections External links

[Ref.: #31511]

Culture collection no.

AIP 26.04, CIP 108336, CCUG 49291, ADV 1053.03, JCM 17568, AIP 26-04

[Ref.: #91742]

SI-ID 281444

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Dialister hominis sp. nov., isolated from human faeces.	Sakamoto M, Ikeyama N, Toyoda A, Murakami T, Mori H, Iino T, Ohkuma M	Int J Syst Evol Microbiol	10.1099/ijsem.0.003797	2020	*
Phylogeny	Dialister micraerophilus sp. nov. and Dialister propionicifaciens sp. nov., isolated from human clinical samples.	Jumas-Bilak E, Jean-Pierre H, Carlier JP, Teyssier C, Bernard K, Gay B, Campos J, Morio F, Marchandin H	Int J Syst Evol Microbiol	10.1099/ijs.0.63715-0	2005	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#31511

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27807 (see below)

#33947 ; Curators of the CIP;
#58497 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 49291
#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#91742

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID281444.1 )

#121964 Collection of Institut Pasteur ; Curators of the CIP; CIP 108336

#27807

IJSEM 2471 2005 ( DOI 10.1099/ijs.0.63715-0 , PubMed 16280512 )

* These data were automatically processed and therefore are not curated

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