Name: Fluviimonas pallidilutea TQQ6
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 134037

Type strain:

Species: Fluviimonas pallidilutea

Strain Designation: TQQ6

Culture col. no.: BCRC 80447, LMG 27056, KCTC 32035

Strain history: <- W-M Chen, Nat Kaohsiung Marine Univ., Taiwan

NCBI tax ID(s): 1165102 (species)

SI-ID 380508

LMG 27056, BCRC 80447, KCTC 32035

Section

Fluviimonas pallidilutea TQQ6 is an aerobe, Gram-negative, rod-shaped bacterium that was isolated from freshwater .

Gram-negative
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Cytophagia*
	Order	*Cytophagales*
	Family	*Spirosomataceae*
	Genus	*Fluviimonas*
	Species	**Fluviimonas pallidilutea**
	Full Scientific Name (LPSN)	Fluviimonas pallidilutea Sheu et al. 2013

Information on morphological and physiological properties Morphology

[Ref.: #31112]	Gram stain	negative
[Ref.: #67771]	Gram stain	negative

[Ref.: #31112]	Cell length	14 µm

[Ref.: #31112]	Cell width	0.4 µm

[Ref.: #31112]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #31112]	Motility	no
[Ref.: #67771]	Motility	no

[Ref.: #31112]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #31112]	growth	20-40 °C
[Ref.: #31112]	optimum	25 °C
[Ref.: #67771]	growth	25 °C

[Ref.: #31112]	Temperature range	mesophilic
[Ref.: #67771]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #31112]			optimum	8
[Ref.: #31112]			growth	7.0-9.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #31112]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

[Ref.: #31112]	Ability of spore formation	no
[Ref.: #67771]	Ability of spore formation	no

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #31112]		NaCl		growth	0-0.5	%

[Ref.: #67771]

Observation

quinones: MK-7

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #31112]	acetate ChEBI	+	carbon source
[Ref.: #31112]	alanine ChEBI	+	carbon source
[Ref.: #31112]	alpha-cyclodextrin ChEBI	+	carbon source
[Ref.: #31112]	asparagine ChEBI	+	carbon source
[Ref.: #31112]	aspartate ChEBI	+	carbon source
[Ref.: #31112]	cellobiose ChEBI	+	carbon source
[Ref.: #31112]	esculin ChEBI	+	hydrolysis
[Ref.: #31112]	fructose ChEBI	+	carbon source
[Ref.: #31112]	fucose ChEBI	+	carbon source
[Ref.: #31112]	galactose ChEBI	+	carbon source
[Ref.: #31112]	glucose ChEBI	+	carbon source
[Ref.: #31112]	glutamate ChEBI	+	carbon source
[Ref.: #31112]	glycogen ChEBI	+	carbon source
[Ref.: #31112]	L-alaninamide ChEBI	+	carbon source
[Ref.: #31112]	lactate ChEBI	+	carbon source
[Ref.: #31112]	lactose ChEBI	+	carbon source
[Ref.: #31112]	maltose ChEBI	+	carbon source
[Ref.: #31112]	mannose ChEBI	+	carbon source
[Ref.: #31112]	myo-inositol ChEBI	+	carbon source
[Ref.: #31112]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #31112]	proline ChEBI	+	carbon source
[Ref.: #31112]	raffinose ChEBI	+	carbon source
[Ref.: #31112]	succinate ChEBI	+	carbon source
[Ref.: #31112]	sucrose ChEBI	+	carbon source
[Ref.: #31112]	trehalose ChEBI	+	carbon source
	Only first 10 entries are displayed. Click here to see all.

	Enzyme	Enzyme activity	EC number
[Ref.: #31112]	acid phosphatase	+	3.1.3.2
[Ref.: #31112]	alkaline phosphatase	+	3.1.3.1
[Ref.: #31112]	alpha-galactosidase	+	3.2.1.22
[Ref.: #31112]	catalase	+	1.11.1.6
[Ref.: #31112]	cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #31112]	Sample type/isolated from	freshwater (river, lake, pond)

[Ref.: #67771]	Sample type/isolated from	From freshwater of the Hansi River
[Ref.: #67771]	Geographic location (country and/or sea, region)	Taitung County
[Ref.: #67771]	Country	Taiwan
[Ref.: #67771]	Country ISO 3 Code	TWN
[Ref.: #67771]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Freshwater
#Environmental	#Aquatic	#Lake (large)
#Environmental	#Aquatic	#Pond (small)
#Environmental	#Aquatic	#River (Creek)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HE793031 (>99% sequence identity) for Fluviimonas pallidilutea subclade from Microbeatlas

Aquatic Samples	258
Soil Samples	4
Animal Samples	30
Plant Samples	1
Total Samples	293

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #31112]	Fluviimonas pallidilutea partial 16S rRNA gene, type strain TQQ6T	HE793031	1401	GenBank	1165102 tax ID

[Ref.: #31112]	GC-content	42.2 mol%
[Ref.: #67771]	GC-content	42.2 mol%	high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #31112]

Culture collection no.

BCRC 80447, LMG 27056, KCTC 32035

[Ref.: #91679]

SI-ID 380508

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Fluviimonas pallidilutea gen. nov., sp. nov., a new member of the family Cytophagaceae isolated from a freshwater river.	Sheu SY, Chen YS, Shiau YW, Chen WM	Int J Syst Evol Microbiol	10.1099/ijs.0.052423-0	2013	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#31112

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27441 (see below)

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#91679

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID380508.1 )

#27441

IJSEM 3861 2013 ( DOI 10.1099/ijs.0.052423-0 , PubMed 23687060 )

* These data were automatically processed and therefore are not curated

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