Sphingobacterium hotanense (NRRL B-59204, CCTCC AB 209007, XH4)

Name: Sphingobacterium hotanense (NRRL B-59204, CCTCC AB 209007, XH4)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 133690

Type strain

Strain Designation XH4

Culture col. no. NRRL B-59204 CCTCC AB 209007 XH4

NCBI tax ID(s) 649196

Special Collections Literature strains

Sphingobacterium hotanense XH4 is an aerobe, Gram-negative, rod-shaped prokaryote that was isolated from soil.

Gram-negative rod-shaped aerobe 16S sequence

Name and taxonomic classification

Culture Collection Numbers

NRRL B-59204 CCTCC AB 209007 XH4

@ref 20215

Last LPSN update 2026-02-09 11:32:00

Domain Bacteria

Phylum Bacteroidota

Class Sphingobacteriia

Order Sphingobacteriales

Family Sphingobacteriaceae

Genus Sphingobacterium

Species Sphingobacterium hotanense

Full scientific name Sphingobacterium hotanense Xiao et al. 2013

BacDive ID	Other strains from **Sphingobacterium hotanense** (1)	Type strain
146529	S. hotanense CCUG 31377

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
30165	negative	1.25 µm	0.8 µm	rod-shaped

Pigmentation

30165

Productionyes

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
30165	positive	growth	20-45
30165	positive	optimum	37	mesophilic

Culture pH

@ref	Ability	Type	PH	PH range
30165	positive	optimum	7.5
30165	positive	growth	06-09	alkaliphile

Physiology and metabolism

Oxygen tolerance

30165

Oxygen toleranceaerobe

Spore formation

30165

Spore formationno

Halophily

@ref	Salt	Growth	Tested relation	Concentration
30165	NaCl	positive	growth	0-3 %
30165	NaCl	positive	optimum	2 %

Observation

30165

Observationaggregates in clumps

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
30165	17234 ChEBI	glucose	+	carbon source
30165	27570 ChEBI	histidine	+	carbon source
30165	17306 ChEBI	maltose	+	carbon source
30165	28053 ChEBI	melibiose	+	carbon source
30165	506227 ChEBI	N-acetylglucosamine	+	carbon source
30165	17632 ChEBI	nitrate	+	reduction
30165	26271 ChEBI	proline	+	carbon source
30165	26546 ChEBI	rhamnose	+	carbon source
30165	33942 ChEBI	ribose	+	carbon source
30165	17814 ChEBI	salicin	+	carbon source
30165	53258 ChEBI	sodium citrate	+	carbon source

Enzymes

@ref	Value	Activity	Ec
30165	acid phosphatase	+	3.1.3.2
30165	alkaline phosphatase	+	3.1.3.1
30165	catalase	+	1.11.1.6
30165	cytochrome oxidase	+	1.9.3.1

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

30165

Sample typesoil

Taxonmaps

69479

Global distribution of 16S sequence FJ859899 (>99% sequence identity) for Sphingobacterium hotanense subclade from Microbeatlas

Aquatic Samples	1604
Soil Samples	1296
Animal Samples	5042
Plant Samples	529
Total Samples	8471

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
30165	Sphingobacterium hotanense strain XH4 16S ribosomal RNA gene, partial sequence	FJ859899	1419		649196

GC content

30165

GC-content (mol%)41.2

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Sphingobacterium hotanense sp. nov., isolated from soil of a Populus euphratica forest, and emended descriptions of Sphingobacterium daejeonense and Sphingobacterium shayense.	Xiao T, He X, Cheng G, Kuang H, Ma X, Yusup K, Hamdun M, Gulsimay A, Fang C, Rahman E	Int J Syst Evol Microbiol	10.1099/ijs.0.030155-0	2012

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#26515	IJSEM 815 2013 ( DOI 10.1099/ijs.0.030155-0 , PubMed 22611196 )
#30165	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26515
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

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Sphingobacterium hotanense (NRRL B-59204, CCTCC AB 209007, XH4)

Name and taxonomic classification

Culture Collection Numbers

Morphology

Cell morphology

Pigmentation

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

BacDive

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