Name: Christiangramia marina KCTC 12366
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 133548

Type strain:

Species: Christiangramia marina

Culture col. no.: KCTC 12366, LMG 25418, KMM 6048, KCTC 22019

Strain history: <- OI Nedashkovskaya, KMM, Russia

NCBI tax ID(s): 409436 (species)

SI-ID 133169

KCTC 12366, LMG 25418

Special Collections

Section

When using BacDive for research please cite our paper

Christiangramia marina KCTC 12366 is an aerobe, Gram-negative, motile bacterium that was isolated from sea urchin.

Gram-negative
motile
rod-shaped
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Bacteroidota*
	Class	*Flavobacteriia*
	Order	*Flavobacteriales*
	Family	*Flavobacteriaceae*
	Genus	*Christiangramia*
	Species	**Christiangramia marina**
	Full Scientific Name (LPSN)	Christiangramia marina (Nedashkovskaya et al. 2010) Deshmukh and Oren 2023

Synonym

Gramella marina

Information on morphological and physiological properties Morphology

[Ref.: #29474]	Gram stain	negative
[Ref.: #67771]	Gram stain	negative

[Ref.: #29474]	Cell length	1.7-2.5 µm

[Ref.: #29474]	Cell width	0.4-0.6 µm

[Ref.: #29474]	Cell shape	rod-shaped
[Ref.: #67771]	Cell shape	rod-shaped

[Ref.: #29474]	Motility	yes
[Ref.: #67771]	Motility	yes

[Ref.: #29474]	Flagellum arrangement	gliding
[Ref.: #67771]	Flagellum arrangement	gliding

[Ref.: #29474]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #29474]	growth	04-37 °C
[Ref.: #29474]	optimum	28-30 °C
[Ref.: #67771]	growth	28-30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #29474]	Oxygen tolerance	aerobe
[Ref.: #67771]	Oxygen tolerance	aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #29474]		NaCl		growth	01-15	%
[Ref.: #29474]		NaCl		optimum	02-05	%

[Ref.: #29474]	Observation	aggregates in chains
[Ref.: #67771]	Observation	quinones: MK-6

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #29474]	alanine ChEBI	+	carbon source
[Ref.: #29474]	citrate ChEBI	+	carbon source
[Ref.: #29474]	glutamate ChEBI	+	carbon source
[Ref.: #29474]	melibiose ChEBI	+	carbon source
[Ref.: #29474]	N-acetylglucosamine ChEBI	+	carbon source
[Ref.: #29474]	proline ChEBI	+	carbon source

	Enzyme	Enzyme activity	EC number
[Ref.: #29474]	alkaline phosphatase	+	3.1.3.1
[Ref.: #29474]	catalase	+	1.11.1.6
[Ref.: #29474]	cytochrome oxidase	+	1.9.3.1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #29474]	Sample type/isolated from	sea urchin

[Ref.: #67771]	Sample type/isolated from	From sea urchin `Strongylocentrotus intermedius`
[Ref.: #67771]	Geographic location (country and/or sea, region)	Troitsa Bay, Gulf of Peter the Great, East Sea(Sea of Japan), Pacific Ocea
[Ref.: #67771]	Country	Pacific Ocean
* marker position based on {}

Isolation sources categories

#Host

#Invertebrates (Other)

#Echinodermata

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #29474]	Gramella marina strain KMM 6048 16S ribosomal RNA gene, partial sequence	AY753911	1438	GenBank ENA	409436 tax ID

[Ref.: #29474]	GC-content	40 mol%
[Ref.: #67771]	GC-content	40.0 mol%

Availability in culture collections External links

[Ref.: #29474]

Culture collection no.

KCTC 12366, LMG 25418, KMM 6048, KCTC 22019

[Ref.: #91498]

SI-ID 133169

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Description of Gramella forsetii sp. nov., a marine Flavobacteriaceae isolated from North Sea water, and emended description of Gramella gaetbulicola Cho et al. 2011.	Panschin I, Becher M, Verbarg S, Sproer C, Rohde M, Schuler M, Amann RI, Harder J, Tindall BJ, Hahnke RL	Int J Syst Evol Microbiol	10.1099/ijsem.0.001700	2017	*
Phylogeny	Gramella marina sp. nov., isolated from the sea urchin Strongylocentrotus intermedius.	Nedashkovskaya OI, Kim SB, Bae KS	Int J Syst Evol Microbiol	10.1099/ijs.0.013870-0	2010	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#29474

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #25876 (see below)

#67771 Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;

#91498

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID133169.1 )

#25876

IJSEM 2799 2010 ( DOI 10.1099/ijs.0.013870-0 , PubMed 20081026 )

* These data were automatically processed and therefore are not curated

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