Name: Niveitalea solisilvae 6-4
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 133119

Type strain:

Species: Niveitalea solisilvae

Strain Designation: 6-4

Culture col. no.: KACC 18808, JCM 31525

Strain history: C. O. Jeon; Dept. of Life Sci., Chung-Ang Univ., South Korea; 6-4.

NCBI tax ID(s): 1852018 (species)

Section

Niveitalea solisilvae 6-4 is an obligate aerobe, Gram-negative, rod-shaped bacterium that was isolated from forest soil.

Gram-negative
rod-shaped
obligate aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Chitinophagia*
	Order	*Chitinophagales*
	Family	*Chitinophagaceae*
	Genus	*Niveitalea*
	Species	**Niveitalea solisilvae**
	Full Scientific Name (LPSN)	Niveitalea solisilvae Hyeon et al. 2017

Information on morphological and physiological properties Morphology

[Ref.: #25297]	Gram stain	negative

[Ref.: #25297]	Cell shape	rod-shaped

[Ref.: #25297]	Motility	no

[Ref.: #25297]	Colony color	white

[Ref.: #25297]	Colony shape	circular
[Ref.: #25297]	Cultivation medium used	R2A

[Ref.: #25297]	Pigment production	no
[Ref.: #25297]	Pigment name	Flexirubin-type

Information on culture and growth conditions Culture and growth conditions

[Ref.: #25297]

Culture medium

Reasoner's 2A agar (R2A)

[Ref.: #25297]

Culture medium growth

		Temperature
[Ref.: #25297]	growth	20-35 °C
[Ref.: #25297]	optimum	30 °C
[Ref.: #67770]	growth	30 °C

[Ref.: #25297]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #25297]			optimum	7
[Ref.: #25297]			growth	6.0-9.0

Information on physiology and metabolism Physiology and metabolism

[Ref.: #25297]

Oxygen tolerance

obligate aerobe

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #25297]		NaCl	optimum	0	%

[Ref.: #67770]

Observation

quinones: MK-7

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #25297]	2,3-butanediol ChEBI	-	respiration
[Ref.: #25297]	2-hydroxybutyrate ChEBI	-	respiration
[Ref.: #25297]	2-oxobutanoate ChEBI	+	respiration
[Ref.: #25297]	2-oxoglutarate ChEBI	+	respiration
[Ref.: #25297]	2-oxopentanoate ChEBI	-	respiration
[Ref.: #25297]	4-hydroxy-L-proline ChEBI	-	respiration
[Ref.: #25297]	4-hydroxybutyrate ChEBI	-	respiration
[Ref.: #25297]	4-hydroxyphenylacetic acid ChEBI	-	respiration
[Ref.: #25297]	acetate ChEBI	+	respiration
[Ref.: #25297]	adipate ChEBI	-	assimilation
[Ref.: #25297]	alpha-cyclodextrin ChEBI	-	respiration
[Ref.: #25297]	alpha-D-glucose ChEBI	-	respiration
[Ref.: #25297]	alpha-lactose ChEBI	-	respiration
[Ref.: #25297]	beta-hydroxybutyrate ChEBI	-	respiration
[Ref.: #25297]	bromosuccinate ChEBI	-	respiration
[Ref.: #25297]	carnitine ChEBI	-	respiration
[Ref.: #25297]	casein	+	hydrolysis
[Ref.: #25297]	cellobiose ChEBI	-	respiration
[Ref.: #25297]	cis-aconitate ChEBI	-	respiration
[Ref.: #25297]	citrate ChEBI	-	respiration
[Ref.: #25297]	D-alanine ChEBI	-	respiration
[Ref.: #25297]	D-arabitol ChEBI	-	respiration
[Ref.: #25297]	D-fructose ChEBI	-	respiration
[Ref.: #25297]	D-galactonic acid lactone ChEBI	-	respiration
[Ref.: #25297]	D-galactose ChEBI	-	respiration
[Ref.: #25297]	D-galacturonic acid ChEBI	-	respiration
[Ref.: #25297]	D-glucarate ChEBI	-	respiration
[Ref.: #25297]	D-gluconate ChEBI	-	respiration
[Ref.: #25297]	D-glucosaminic acid ChEBI	-	respiration
[Ref.: #25297]	D-glucose ChEBI	-	assimilation
[Ref.: #25297]	D-glucose 6-phosphate ChEBI	-	respiration
[Ref.: #25297]	D-glucuronate ChEBI	-	respiration
[Ref.: #25297]	D-mannitol ChEBI	-	assimilation
[Ref.: #25297]	D-mannitol ChEBI	-	respiration
[Ref.: #25297]	D-mannose ChEBI	-	assimilation
[Ref.: #25297]	D-mannose ChEBI	-	respiration
[Ref.: #25297]	D-psicose ChEBI	-	respiration
[Ref.: #25297]	D-serine ChEBI	-	respiration
[Ref.: #25297]	D-sorbitol ChEBI	-	respiration
[Ref.: #25297]	decanoate ChEBI	-	assimilation
[Ref.: #25297]	dextrin ChEBI	+	respiration
[Ref.: #25297]	erythritol ChEBI	+	respiration
[Ref.: #25297]	esculin ChEBI	+	hydrolysis
[Ref.: #25297]	ethanolamine ChEBI	-	respiration
[Ref.: #25297]	formate ChEBI	-	respiration
[Ref.: #25297]	gamma-aminobutyric acid ChEBI	+	respiration
[Ref.: #25297]	gelatin ChEBI	-	hydrolysis
[Ref.: #25297]	gentiobiose ChEBI	-	respiration
[Ref.: #25297]	glucose ChEBI	-	fermentation
[Ref.: #25297]	glucose 1-phosphate ChEBI	-	respiration
[Ref.: #25297]	glucuronamide ChEBI	-	respiration
[Ref.: #25297]	glycerol ChEBI	+	respiration
[Ref.: #25297]	glycogen ChEBI	+	respiration
[Ref.: #25297]	glycyl L-aspartic acid ChEBI	-	respiration
[Ref.: #25297]	glycyl-l-glutamate ChEBI	-	respiration
[Ref.: #25297]	inosine ChEBI	-	respiration
[Ref.: #25297]	itaconate ChEBI	-	respiration
[Ref.: #25297]	L-alaninamide ChEBI	+	respiration
[Ref.: #25297]	L-alanine ChEBI	+	respiration
[Ref.: #25297]	L-alanylglycine ChEBI	+	respiration
[Ref.: #25297]	L-arabinose ChEBI	-	assimilation
[Ref.: #25297]	L-arabinose ChEBI	+	respiration
[Ref.: #25297]	L-asparagine ChEBI	-	respiration
[Ref.: #25297]	L-aspartate ChEBI	+	respiration
[Ref.: #25297]	L-fucose ChEBI	-	respiration
[Ref.: #25297]	L-glutamate ChEBI	+	respiration
[Ref.: #25297]	L-histidine ChEBI	-	respiration
[Ref.: #25297]	L-leucine ChEBI	-	respiration
[Ref.: #25297]	L-ornithine ChEBI	-	respiration
[Ref.: #25297]	L-phenylalanine ChEBI	-	respiration
[Ref.: #25297]	L-proline ChEBI	+	respiration
[Ref.: #25297]	L-pyroglutamic acid ChEBI	-	respiration
[Ref.: #25297]	L-rhamnose ChEBI	-	respiration
[Ref.: #25297]	L-serine ChEBI	+	respiration
[Ref.: #25297]	L-threonine ChEBI	+	respiration
[Ref.: #25297]	lactate ChEBI	+	respiration
[Ref.: #25297]	lactulose ChEBI	-	respiration
[Ref.: #25297]	malate ChEBI	-	assimilation
[Ref.: #25297]	malonate ChEBI	+	respiration
[Ref.: #25297]	maltose ChEBI	-	assimilation
[Ref.: #25297]	maltose ChEBI	-	respiration
[Ref.: #25297]	melibiose ChEBI	-	respiration
[Ref.: #25297]	methyl beta-D-glucopyranoside ChEBI	-	respiration
[Ref.: #25297]	methyl pyruvate ChEBI	+	respiration
[Ref.: #25297]	monomethyl succinate ChEBI	+	respiration
[Ref.: #25297]	myo-inositol ChEBI	-	respiration
[Ref.: #25297]	N-acetylgalactosamine ChEBI	-	respiration
[Ref.: #25297]	N-acetylglucosamine ChEBI	-	assimilation
[Ref.: #25297]	nitrate ChEBI	+	reduction
[Ref.: #25297]	phenylacetate ChEBI	-	assimilation
[Ref.: #25297]	phenylethylamine ChEBI	-	respiration
[Ref.: #25297]	potassium gluconate ChEBI	-	assimilation
[Ref.: #25297]	propionate ChEBI	-	respiration
[Ref.: #25297]	putrescine ChEBI	-	respiration
[Ref.: #25297]	quinate ChEBI	-	respiration
[Ref.: #25297]	raffinose ChEBI	-	respiration
[Ref.: #25297]	ribitol ChEBI	-	respiration
[Ref.: #25297]	sebacic acid ChEBI	-	respiration
[Ref.: #25297]	sodium citrate ChEBI	-	assimilation
[Ref.: #25297]	starch ChEBI	-	hydrolysis
[Ref.: #25297]	succinamate ChEBI	-	respiration
[Ref.: #25297]	succinate ChEBI	+	respiration
[Ref.: #25297]	sucrose ChEBI	-	respiration
[Ref.: #25297]	thymidine ChEBI	-	respiration
[Ref.: #25297]	trehalose ChEBI	-	respiration
[Ref.: #25297]	turanose ChEBI	-	respiration
[Ref.: #25297]	tween 20 ChEBI	-	hydrolysis
[Ref.: #25297]	tween 40 ChEBI	+	respiration
[Ref.: #25297]	tween 80 ChEBI	-	hydrolysis
[Ref.: #25297]	tween 80 ChEBI	+	respiration
[Ref.: #25297]	tyrosine ChEBI	-	hydrolysis
[Ref.: #25297]	urea ChEBI	-	hydrolysis
[Ref.: #25297]	uridine ChEBI	-	respiration
[Ref.: #25297]	urocanic acid ChEBI	-	respiration
[Ref.: #25297]	xylitol ChEBI	-	respiration
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #25297]		dinitrogen ChEBI	no
[Ref.: #25297]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #25297]	acid phosphatase	+	3.1.3.2
[Ref.: #25297]	alkaline phosphatase	+	3.1.3.1
[Ref.: #25297]	alpha-chymotrypsin	-	3.4.21.1
[Ref.: #25297]	alpha-fucosidase	+	3.2.1.51
[Ref.: #25297]	alpha-galactosidase	-	3.2.1.22
[Ref.: #25297]	alpha-glucosidase	-	3.2.1.20
[Ref.: #25297]	alpha-mannosidase	+	3.2.1.24
[Ref.: #25297]	arginine dihydrolase	-	3.5.3.6
[Ref.: #25297]	beta-galactosidase	+	3.2.1.23
[Ref.: #25297]	beta-glucosidase	+	3.2.1.21
[Ref.: #25297]	beta-glucuronidase	-	3.2.1.31
[Ref.: #25297]	catalase	-	1.11.1.6
[Ref.: #25297]	cystine arylamidase	+	3.4.11.3
[Ref.: #25297]	cytochrome oxidase	+	1.9.3.1
[Ref.: #25297]	esterase (C 4)	-
[Ref.: #25297]	esterase Lipase (C 8)	-
[Ref.: #25297]	leucine arylamidase	+	3.4.11.1
[Ref.: #25297]	lipase (C 14)	-
[Ref.: #25297]	N-acetyl-beta-glucosaminidase	+	3.2.1.52
[Ref.: #25297]	naphthol-AS-BI-phosphohydrolase	+
[Ref.: #25297]	trypsin	-	3.4.21.4
[Ref.: #25297]	valine arylamidase	+
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #25297]

Fatty acid	Percentage
C15:0 iso	34
C15:1 iso G	12.6
C17:0 iso 3OH	12.2
C15:0 anteiso	11.2
C16:1ω5c	6.6
C16:1ω7c / C16:1ω6c	4.4
C15:0 iso 3OH	2.8
C16:0	2.6
C16:0 iso	2.4
C15:1 anteiso A	2
C16:0 3OH	1.6
C17:0 2OH	1.2
C14:0 iso	1
C16:0 iso 3OH	1
C14:1ω5c	1

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #25297]	Sample type/isolated from	forest soil
[Ref.: #25297]	Geographic location (country and/or sea, region)	Jeju island, South Korea
[Ref.: #25297]	Country	Republic of Korea
[Ref.: #25297]	Country ISO 3 Code	KOR
[Ref.: #25297]	Continent	Asia
[Ref.: #25297]	Geographic location	33.0000°/126.0000°

[Ref.: #67770]	Sample type/isolated from	Forest soil in Jeju island
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Forest
#Environmental	#Terrestrial	#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KX268597 (>99% sequence identity) for Niveitalea solisilvae subclade from Microbeatlas

Aquatic Samples	188
Soil Samples	1323
Animal Samples	71
Plant Samples	256
Total Samples	1838

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #25297]	16S rRNA gene sequences	KX268597	1494	ENA	1852018 tax ID

[Ref.: #25297]	GC-content	45.8 mol%	Thermal denaturation, fluorometry
[Ref.: #67770]	GC-content	45.8 mol%	thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #25297]

Culture collection no.

KACC 18808, JCM 31525

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Niveitalea solisilvae gen. nov., sp. nov., isolated from forest soil and emended description of the genus Flavihumibacter Zhang et al. 2010.	Hyeon JW, Lee HJ, Jeong SE, Cho GY, Jeon CO	Int J Syst Evol Microbiol	10.1099/ijsem.0.001776	2017	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#25297

J. W. L. Hyeon, H. J.,Jeong, S. E.,Cho, G. Y.,Jeon, C. O.: Niveitalea solisilvae gen. nov., sp. nov., isolated from forest soil and emended description of the genus Flavihumibacter Zhang et al. 2010. IJSEM 67: 1374 - 1380 2017 ( DOI 10.1099/ijsem.0.001776 , PubMed 28126047 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Niveitalea solisilvae in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF