Name: Clostridium vulturis YMB-57
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 132937

Type strain:

Species: Clostridium vulturis

Strain Designation: YMB-57

Culture col. no.: DSM 100198, JCM 17998, KCTC 15114

Strain history: Y. H. Chang YMB-57.

NCBI tax ID(s): 1157312 (species)

SI-ID 396573

DSM 100198

Section

Clostridium vulturis YMB-57 is a mesophilic bacterium that was isolated from intestine of cinereous vulture .

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Clostridiaceae*
	Genus	*Clostridium*
	Species	**Clostridium vulturis**
	Full Scientific Name (LPSN)	Clostridium vulturis Paek et al. 2015

Information on culture and growth conditions Culture and growth conditions

[Ref.: #24725]

Culture medium

CHOPPED MEAT MEDIUM WITH CARBOHYDRATES (DSMZ Medium 110)

[Ref.: #24725]

Culture medium growth

[Ref.: #24725]

Culture medium link

Medium recipe at MediaDive

[Ref.: #24725]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #24725]			growth	37 °C
[Ref.: #67770]			growth	37 °C

[Ref.: #24725]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #24725]	Sample type/isolated from	intestine of cinereous vulture (Aegypius monachus)
[Ref.: #24725]	Host species	Aegypius monachus
[Ref.: #24725]	Geographic location (country and/or sea, region)	Paju
[Ref.: #24725]	Country	Republic of Korea
[Ref.: #24725]	Country ISO 3 Code	KOR
[Ref.: #24725]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Intestine of a dead cinereous vulture (Aegypius monachus)
[Ref.: #67770]	Host species	Aegypius monachus
* marker position based on {}

Isolation sources categories

#Host	#Birds	-
#Host Body-Site	#Gastrointestinal tract	-

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JQ423949 (>99% sequence identity) for Clostridium vulturis subclade from Microbeatlas

Aquatic Samples	29
Soil Samples	23
Animal Samples	360
Plant Samples	13
Total Samples	425

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #24725]	Clostridium vulturis strain YMB-57 16S ribosomal RNA gene, partial sequence	JQ423949	1412	ENA	1157312 tax ID

[Ref.: #67770]

GC-content

34 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #24725]

Culture collection no.

DSM 100198, JCM 17998, KCTC 15114

[Ref.: #91214]

SI-ID 396573

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Clostridium vulturis sp. nov., isolated from the intestine of the cinereous vulture (Aegypius monachus).	Paek J, Lee MH, Kim BC, Sang BI, Paek WK, Jin TE, Shin Y, Park IS, Chang YH	Antonie Van Leeuwenhoek	10.1007/s10482-014-0229-x	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#24725

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100198

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#91214

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID396573.1 )

* These data were automatically processed and therefore are not curated

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