Promicromonospora alba (DSM 100490, CGMCC 4.7283, 1C-HV12)

Name: Promicromonospora alba (DSM 100490, CGMCC 4.7283, 1C-HV12)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 132440

Type strain

Strain Designation 1C-HV12

Culture col. no. DSM 100490 CGMCC 4.7283 1C-HV12 JCM 31782

NCBI tax ID(s) 1616110

Special Collections DSMZ JCM Literature strains

History <- C. Liu, Northeast Agricultural Univ., Harbin, China; 1C-HV12 CGMCC 4.7283 <-- C. Liu; Northeast Agric. Univ., China; 1C-HV12.

Links

Promicromonospora alba 1C-HV12 is an aerobe, Gram-positive, coccus-shaped prokaryote that forms irregular colonies and was isolated from cuticle of the ant Camponotus japonicas Mayr.

Gram-positive coccus-shaped colony-forming aerobe genome sequence 16S sequence

Name and taxonomic classification

SI-ID 406945

JCM 31782,DSM 100490

@ref 20215

Last LPSN update 2026-02-09 11:31:42

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micrococcales

Family Promicromonosporaceae

Genus Promicromonospora

Species Promicromonospora alba

Full scientific name Promicromonospora alba Guo et al. 2016

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
43742	positive	coccus-shaped

Colony morphology

@ref	Colony color	Colony shape	Incubation period	Medium used
43742	Yellow to yellowish-white	irregular	1-2 days	ISP 3

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
43742	ISP 3
24229	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
24229	positive	growth	28	mesophilic
43742	positive	growth	4-37
43742	positive	optimum	28	mesophilic
67770	positive	growth	28	mesophilic

Culture pH

@ref	Ability	Type	PH	PH range
43742	positive	optimum	7
43742	positive	growth	7-10	alkaliphile

Physiology and metabolism

Oxygen tolerance

43742

Oxygen toleranceaerobe

Spore formation

43742

Spore formationno

Halophily

@ref	Salt	Growth	Tested relation	Concentration
43742	NaCl	positive	growth	0-7 %(w/v)

Observation

67770

Observationquinones: MK-9(H₄), MK-9(H₂)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
43742	62968 ChEBI	cellulose	-	degradation
43742	16919 ChEBI	creatine	+	nitrogen source
43742	15824 ChEBI	D-fructose	-	carbon source
43742	12936 ChEBI	D-galactose	-	carbon source
43742	17634 ChEBI	D-glucose	-	carbon source
43742	16899 ChEBI	D-mannitol	+	carbon source
43742	16024 ChEBI	D-mannose	+	carbon source
43742	16988 ChEBI	D-ribose	-	carbon source
43742	17924 ChEBI	D-sorbitol	+	carbon source
43742	65327 ChEBI	D-xylose	-	carbon source
43742	4853 ChEBI	esculin	+	hydrolysis
43742	5291 ChEBI	gelatin	+	hydrolysis
43742	15428 ChEBI	glycine	+	nitrogen source
43742	16977 ChEBI	L-alanine	-	nitrogen source
43742	30849 ChEBI	L-arabinose	-	carbon source
43742	16467 ChEBI	L-arginine	-	nitrogen source
43742	17196 ChEBI	L-asparagine	+	nitrogen source
43742	29991 ChEBI	L-aspartate	+	nitrogen source
43742	29985 ChEBI	L-glutamate	+	nitrogen source
43742	18050 ChEBI	L-glutamine	-	nitrogen source
43742	17203 ChEBI	L-proline	-	nitrogen source
43742	62345 ChEBI	L-rhamnose	+	carbon source
43742	17115 ChEBI	L-serine	-	nitrogen source
43742	16857 ChEBI	L-threonine	-	nitrogen source
43742	17895 ChEBI	L-tyrosine	-	nitrogen source
43742	17716 ChEBI	lactose	+	carbon source
43742	17306 ChEBI	maltose	+	carbon source
43742	17268 ChEBI	myo-inositol	+	carbon source
43742	17632 ChEBI	nitrate	-	reduction
43742	16634 ChEBI	raffinose	+	carbon source
43742	28017 ChEBI	starch	+	hydrolysis
43742	17992 ChEBI	sucrose	+	carbon source

Metabolite production

@ref	Chebi-ID	Metabolite	Production
43742	16136 ChEBI	hydrogen sulfide

Enzymes

@ref	Value	Activity	Ec
43742	catalase	+	1.11.1.6
43742	urease	+	3.5.1.5

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Arthropoda	#Insecta
#Host Body-Site	#Organ	#Skin, Nail, Hair

Isolation

@ref	Sample type	Host species	Geographic location	Country	Country ISO 3 Code	Continent
24229	cuticle of the ant Camponotus japonicas Mayr	Camponotus japonicus	Heilongjiang province, Harbin, Northeast Agricultural University	China	CHN	Asia
43742	The cuticle of Camponotus japonicus Mayr collected from Northeast Agricultural University		Harbin, Heilongjiang	China	CHN	Asia
67770	Cuticle of Camponotus japonicus Mayr	Camponotus japonicus		China	CHN	Asia

Taxonmaps

69479

Global distribution of 16S sequence KP784765 (>99% sequence identity) for Promicromonospora from Microbeatlas

Aquatic Samples	37
Soil Samples	806
Animal Samples	117
Plant Samples	403
Total Samples	1363

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
24229	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM4265490v1 assembly for Promicromonospora alba CGMCC 4.7283	scaffold	GCA_042654905	1616110	52.58

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
24229	Promicromonospora alba strain 1C-HV12 16S ribosomal RNA gene, partial sequence	KP784765	1480		1616110

GC content

@ref	GC-content (mol%)	Method
24229	71.6	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Promicromonospora soli sp. nov., a novel actinomycete isolated from soil.	Zheng W, Li D, Zhao J, Liu C, Zhao Y, Xiang W, Wang X	Int J Syst Evol Microbiol	10.1099/ijsem.0.002207	2017
Phylogeny	Promicromonospora alba sp. nov., an actinomycete isolated from the cuticle of Camponotus japonicas Mayr.	Guo L, Liu C, Zhao J, Li C, Guo S, Fan J, Li J, Wang X, Xiang W	Int J Syst Evol Microbiol	10.1099/ijsem.0.000885	2016

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#24229	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100490
#43742	Lifeng Guo, Chongxi Liu, Junwei Zhao, Chuang Li, Siyu Guo, Jianlong Fan, Jiansong Li, Xiangjing Wang, Wensheng Xiang: Promicromonospora alba sp. nov., an actinomycete isolated from the cuticle of Camponotus japonicas Mayr. IJSEM 66: 1340 - 1345 2016 ( DOI 10.1099/ijsem.0.000885 , PubMed 26746665 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Promicromonospora alba (DSM 100490, CGMCC 4.7283, 1C-HV12)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Metabolite production

Enzymes

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_042654905

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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