Crassaminicella profunda (DSM 27501, JCM 19377, 1766H)

Name: Crassaminicella profunda (DSM 27501, JCM 19377, 1766H)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 131417

Type strain

Strain Designation 1766H, Ra1766 H

Culture col. no. DSM 27501 JCM 19377 1766H Ra1766 H

NCBI tax ID(s) 1286698

Special Collections DSMZ JCM

History <- M. L. Fardeau, IRD; Ra1766 H <- R. Lakhal {2011} M.-L. Fardeau; IRD-MIO, Aix-Marseille Univ., France; Ra1766H.

Links

Crassaminicella profunda 1766H is an anaerobe bacterium that was isolated from deep-sea sediment.

anaerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 404747

JCM 19377,JCM:39088,DSM 27501

@ref 20215

Last LPSN update 2026-02-09 11:31:27

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Clostridiaceae

Genus Crassaminicella

Species Crassaminicella profunda

Full scientific name Crassaminicella profunda Lakhal et al. 2015

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
22644	MARINITOGA MEDIUM (DSMZ Medium 904)		Medium recipe at MediaDive	Name: MARINITOGA MEDIUM (DSMZ Medium 904) Composition: Sea Salt 30.0 g/l PIPES 6.0 g/l D-Glucose 2.5 g/l Tryptone 1.0 g/l Yeast extract 1.0 g/l Na2S x 9 H2O 0.5 g/l L-Cysteine HCl x H2O 0.5 g/l Sodium resazurin 0.0005 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
22644	positive	growth	30
67770	positive	growth	30

Physiology and metabolism

Oxygen tolerance

22644

Oxygen toleranceanaerobe

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Environmental	#Aquatic	#Sediment

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
22644	deep-sea sediment	Guaymas basin, Southern Trough site at a depth of 2002 m	Mexico	MEX	North America	27.0122	-111.415 27.0122/-111.415
67770	Sediments of the Guaymas basin	Gulf of California	Mexico	MEX	North America

Taxonmaps

69479

Global distribution of 16S sequence KC329523 (>99% sequence identity) for Crassaminicella profunda subclade from Microbeatlas

Aquatic Samples	218
Soil Samples	16
Animal Samples	7
Plant Samples	2
Total Samples	243

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
22644	1	Risk group (German classification)

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
22644	Crassaminicella profunda strain Ra1766H 16S ribosomal RNA gene, partial sequence	KC329523	1456		1286698

GC content

@ref	GC-content (mol%)	Method
22644	33.7	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Crassaminicella profunda gen. nov., sp. nov., an anaerobic marine bacterium isolated from deep-sea sediments.	Lakhal R, Pradel N, Postec A, Ollivier B, Cayol JL, Godfroy A, Fardeau ML, Gales G	Int J Syst Evol Microbiol	10.1099/ijsem.0.000386	2015

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#22644	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 27501
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Crassaminicella profunda (DSM 27501, JCM 19377, 1766H)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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