Name: Thermomicrobium carboxidum KI3
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 131291

Type strain:

Species: Thermomicrobium carboxidum

Strain Designation: KI3

Culture col. no.: DSM 27067, ATCC BAA-2535

Strain history: <- C. King, Louisiana State Univ., Baton Rouge, USA; KI3

NCBI tax ID(s): 1401547 (species)

SI-ID 406401

DSM 27067

Section

Thermomicrobium carboxidum KI3 is a thermophilic bacterium that was isolated from geothermally heated biofilm on a steaming tumulus.

thermophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Thermomicrobiota*
	Class	*Thermomicrobia*
	Order	*Thermomicrobiales*
	Family	*Thermomicrobiaceae*
	Genus	*Thermomicrobium*
	Species	**Thermomicrobium carboxidum**
	Full Scientific Name (LPSN)	Thermomicrobium carboxidum King and King 2014

Information on culture and growth conditions Culture and growth conditions

[Ref.: #22518]

Culture medium

THERMOMICROBIUM ROSEUM MEDIUM (DSMZ Medium 592)

[Ref.: #22518]

Culture medium growth

[Ref.: #22518]

Culture medium link

Medium recipe at MediaDive

[Ref.: #22518]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #22518]			growth	65 °C

[Ref.: #22518]

Temperature range

thermophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #22518]	Sample type/isolated from	geothermally heated biofilm on a steaming tumulus
[Ref.: #22518]	Geographic location (country and/or sea, region)	Hawaii, Kilauea Iki crater (19° 24' 51.1'' N 155° 14' 57.4'' W)
[Ref.: #22518]	Country	USA
[Ref.: #22518]	Country ISO 3 Code	USA
[Ref.: #22518]	Continent	North America
[Ref.: #22518]	Geographic location	19.4142°/-155.2490°
* marker position based on {}

Isolation sources categories

#Environmental	#Biofilm	-
#Environmental	#Terrestrial	#Geologic

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #22518]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #22518]	Thermomicrobium carboxidum strain KI3 from USA 16S ribosomal RNA gene, partial sequence	KF193529	1275	ENA	1401547 tax ID

[Ref.: #22518]

GC-content

66.0 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #22518]

Culture collection no.

DSM 27067, ATCC BAA-2535

[Ref.: #89733]

SI-ID 406401

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Thermomicrobium carboxidum sp. nov., and Thermorudis peleae gen. nov., sp. nov., carbon monoxide-oxidizing bacteria isolated from geothermally heated biofilms.	King CE, King GM	Int J Syst Evol Microbiol	10.1099/ijs.0.060327-0	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22518

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 27067

#89733

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406401.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Thermomicrobium carboxidum in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF