Name: Thermomicrobium carboxidum KI3
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 131291

Type strain:

Species: Thermomicrobium carboxidum

Strain Designation: KI3

Culture col. no.: DSM 27067, ATCC BAA-2535

Strain history: <- C. King, Louisiana State Univ., Baton Rouge, USA; KI3

NCBI tax ID(s): 1401547 (species)

SI-ID 406401

DSM 27067

Special Collections

DSMZ

Section

Thermomicrobium carboxidum KI3 is a bacterium that was isolated from geothermally heated biofilm on a steaming tumulus.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Thermomicrobiota*
	Class	*Thermomicrobia*
	Order	*Thermomicrobiales*
	Family	*Thermomicrobiaceae*
	Genus	*Thermomicrobium*
	Species	**Thermomicrobium carboxidum**
	Full Scientific Name (LPSN)	Thermomicrobium carboxidum King and King 2014

Information on culture and growth conditions Culture and growth conditions

[Ref.: #22518]

Culture medium

THERMOMICROBIUM ROSEUM MEDIUM (DSMZ Medium 592)

[Ref.: #22518]

Culture medium growth

[Ref.: #22518]

Culture medium link

Medium recipe at MediaDive

[Ref.: #22518]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #22518]			growth	65 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #22518]	Sample type/isolated from	geothermally heated biofilm on a steaming tumulus
[Ref.: #22518]	Geographic location (country and/or sea, region)	Hawaii, Kilauea Iki crater (19° 24' 51.1'' N 155° 14' 57.4'' W)
[Ref.: #22518]	Country	USA
[Ref.: #22518]	Country ISO 3 Code	USA
[Ref.: #22518]	Continent	North America
[Ref.: #22518]	Geographic location	19.4142°/-155.2490°
* marker position based on {}

Isolation sources categories

#Environmental	#Biofilm	-
#Environmental	#Terrestrial	#Geologic

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #22518]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #22518]	Thermomicrobium carboxidum strain KI3 from USA 16S ribosomal RNA gene, partial sequence	KF193529	1275	GenBank ENA	1401547 tax ID

[Ref.: #22518]

GC-content

66.0 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #22518]

Culture collection no.

DSM 27067, ATCC BAA-2535

[Ref.: #89733]

SI-ID 406401

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Thermomicrobium carboxidum sp. nov., and Thermorudis peleae gen. nov., sp. nov., carbon monoxide-oxidizing bacteria isolated from geothermally heated biofilms.	King CE, King GM	Int J Syst Evol Microbiol	10.1099/ijs.0.060327-0	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22518

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 27067

#89733

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID406401.1 )

* These data were automatically processed and therefore are not curated

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