Name: Flammeovirga arenaria DSM 28230
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 131148

Type strain:

Species: Flammeovirga arenaria

Culture col. no.: DSM 28230, CIP 109101, IFO (now NBRC) 15982, JCM 21777, NBRC 15982, ATCC 23161, IAM 15329, IFO 15982, LMG 13024, NCIMB 1413

Strain history: IAM 15329 <-- NBRC 15982 <-- IFO 15982 <-- NCIMB 1413 <-- R. A. Lewin HJ1.

NCBI tax ID(s): 1025 (species)

SI-ID 10155

LMG 13024, ATCC 23161, LMG 18922, NCIMB 1413, IFO15982, NBRC 15982, KCTC 12354, CIP 109101, JCM 21777, IAM 15329, DSM 28230

Special Collections

Section

Flammeovirga arenaria DSM 28230 is a bacterium of the family Flammeovirgaceae.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Cytophagia*
	Order	*Cytophagales*
	Family	*Flammeovirgaceae*
	Genus	*Flammeovirga*
	Species	**Flammeovirga arenaria**
	Full Scientific Name (LPSN)	Flammeovirga arenaria (ex Lewin 1969) Takahashi et al. 2006

Information on culture and growth conditions Culture and growth conditions

[Ref.: #22440]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #22440]

Culture medium growth

[Ref.: #22440]

Culture medium link

Medium recipe at MediaDive

[Ref.: #22440]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #22440]			growth	25 °C
[Ref.: #67770]			growth	25 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Brown sand

[Ref.: #22440]	Geographic location (country and/or sea, region)	Norse Beach Puerto Penasco Sonora
[Ref.: #22440]	Country	Mexico
[Ref.: #22440]	Country ISO 3 Code	MEX
[Ref.: #22440]	Continent	North America
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB078078 (>99% sequence identity) for Flammeovirga arenaria subclade from Microbeatlas

Aquatic Samples	188
Soil Samples	5
Animal Samples	11
Plant Samples
Total Samples	204

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #22440]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #22440]	Microscilla arenaria gene for 16S rRNA, strain:IFO 15982	AB078078	1480	GenBank ENA	1025 tax ID
[Ref.: #124043]	Flammeovirga arenaria gene for 16S rRNA, partial sequence, strain: NBRC 15982.	AB681015	1450	GenBank ENA	1025 tax ID	*

Availability in culture collections External links

[Ref.: #22440]

Culture collection no.

DSM 28230, CIP 109101, IFO (now NBRC) 15982, JCM 21777, NBRC 15982, ATCC 23161, IAM 15329, IFO 15982, LMG 13024, NCIMB 1413

[Ref.: #89601]

SI-ID 10155

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Emendation of the genus Flammeovirga and Flammeovirga aprica with the proposal of Flammeovirga arenaria nom. rev., comb. nov. and Flammeovirga yaeyamensis sp. nov.	Takahashi M, Suzuki KI, Nakagawa Y	Int J Syst Evol Microbiol	10.1099/ijs.0.64324-0	2006	*
Phylogeny	Flammeovirga pacifica sp. nov., isolated from deep-sea sediment.	Xu H, Fu Y, Yang N, Ding Z, Lai Q, Zeng R	Int J Syst Evol Microbiol	10.1099/ijs.0.030676-0	2011	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22440

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 28230

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#89601

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID10155.1 )

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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