Natrialba hulunbeirensis (DSM 29987, AS 1.1986, JCM 10989)

Name: Natrialba hulunbeirensis (DSM 29987, AS 1.1986, JCM 10989)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 130844

Type strain

Strain Designation X21

Culture col. no. DSM 29987 AS 1.1986 JCM 10989 NBRC 102639 X21 1 more

NCBI tax ID(s) 1227493 123783

Special Collections DSMZ JCM

History DSMZ <- NBRC <- JCM 10989 <- Y. Ma; X21 JCM <-- Y. Ma X21.

Links

Natrialba hulunbeirensis X21 is an archaeon that was isolated from sediment of Chahannao soda lake.

genome sequence 16S sequence Archaea

Name and taxonomic classification

SI-ID 100800

JCM 10989,AS 1.1986,NBRC 102639,CGMCC 1.1986,CGMCC 1.2704,DSM 29987

@ref 20215

Last LPSN update 2026-05-29 08:37:28

Domain Archaea

Phylum Methanobacteriota

Class Halobacteria

Order Halobacteriales

Family Natrialbaceae

Genus Natrialba

Species Natrialba hulunbeirensis

Full scientific name Natrialba hulunbeirensis Xu et al. 2001

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
21923	NATRONOBACTERIA MEDIUM (DSMZ Medium 371)		Medium recipe at MediaDive	Name: NATRONOBACTERIA MEDIUM (DSMZ Medium 371) Composition: NaCl 200.0 g/l Agar 20.0 g/l Casamino acids 5.0 g/l Yeast extract 5.0 g/l Na2CO3 5.0 g/l Na2-glutamate 1.0 g/l KH2PO4 1.0 g/l KCl 1.0 g/l NH4Cl 1.0 g/l MgSO4 x 7 H2O 0.24 g/l CaSO4 x 2 H2O 0.17 g/l HCl 0.0025 g/l FeCl2 x 4 H2O 0.0015 g/l CoCl2 x 6 H2O 0.00019 g/l MnCl2 x 4 H2O 0.0001 g/l ZnCl2 7e-05 g/l Na2MoO4 x 2 H2O 3.6e-05 g/l NiCl2 x 6 H2O 2.4e-05 g/l H3BO3 6e-06 g/l CuCl2 x 2 H2O 2e-06 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
21923	positive	growth	37
67770	positive	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	facultative anaerobe	92.033

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Lake (large)
#Environmental	#Aquatic	#Non-marine Saline and Alkaline
#Environmental	#Aquatic	#Sediment

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
21923	sediment of Chahannao soda lake	Inner Mongolia Autonomous Region	China	CHN	Asia
67770	Sediment from a soda lake in Inner Mongolia Autonomous Region		China	CHN	Asia

Taxonmaps

69479

Global distribution of 16S sequence AF262026 (>99% sequence identity) for Natrialba from Microbeatlas

Aquatic Samples	6
Soil Samples	3
Animal Samples	0
Plant Samples	0
Total Samples	9

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
21923	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM33757v1 assembly for Natrialba hulunbeirensis JCM 10989	contig	GCA_000337575	1227493.4	2531839260	1227493	69.43

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
21923	Natrialba hulunbeirensis AS1.1986 16S ribosomal RNA gene, partial sequence	AF262026	1471		123783
124043	Natrialba hulunbeirensis gene for 16S rRNA, complete sequence, strain: JCM 10989.	AB663457	1472		123783

GC content

@ref	GC-content (mol%)	Method
67770	64.3	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM33757v1 assembly for Natrialba hulunbeirensis JCM 10989
BV-BRC: 1227493.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	92.03	no
125439	motility	BacteriaNetⓘ	no	63.82	no
125439	gram_stain	BacteriaNetⓘ	positive	50.43	no
125439	spore_formation	BacteriaNetⓘ	no	81.79	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Genus-specific secondary metabolome in Allokutzneria and Kibdelosporangium.	Ma MJ, Yu WC, Sun HY, Dong BC, Hu GA, Zhou ZY, Hua Y, Basnet BB, Yu YL, Wang H, Wei B.	Synth Syst Biotechnol	10.1016/j.synbio.2024.03.015	2024
Metabolism	Dihydroxyacetone metabolism in Haloferax volcanii.	Ouellette M, Makkay AM, Papke RT.	Front Microbiol	10.3389/fmicb.2013.00376	2013
Enzymology	Wide distribution among halophilic archaea of a novel polyhydroxyalkanoate synthase subtype with homology to bacterial type III synthases.	Han J, Hou J, Liu H, Cai S, Feng B, Zhou J, Xiang H.	Appl Environ Microbiol	10.1128/aem.01117-10	2010
Phylogeny	Natrialba swarupiae sp. nov., a halophilic archaeon isolated from a hypersaline lake in India.	Kajale S, Deshpande N, Pali S, Shouche Y, Sharma A	Int J Syst Evol Microbiol	10.1099/ijsem.0.003986	2020
Phylogeny	Natrialba hulunbeirensis sp. nov. and Natrialba chahannaoensis sp. nov., novel haloalkaliphilic archaea from soda lakes in Inner Mongolia Autonomous Region, China.	Xu Y, Wang Z, Xue Y, Zhou P, Ma Y, Ventosa A, Grant WD	Int J Syst Evol Microbiol	10.1099/00207713-51-5-1693	2001

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#21923	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 29987
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Natrialba hulunbeirensis (DSM 29987, AS 1.1986, JCM 10989)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_000337575

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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