Name: Actinopolyspora biskrensis H254
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 130805

Type strain:

Species: Actinopolyspora biskrensis

Strain Designation: H254

Culture col. no.: DSM 46684, CECT 8576

Strain history: <- N. Sabaou, LBSM, Kouba, Alger, Algeria; H254 <- N. Bouras et al.

NCBI tax ID(s): 1470178 (species)

SI-ID 401581

DSM 46684

Special Collections

DSMZ

Section

Actinopolyspora biskrensis H254 is a spore-forming, Gram-positive bacterium that was isolated from Saharan soil.

Gram-positive
spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Pseudonocardiales*
	Family	*Pseudonocardiaceae*
	Genus	*Actinopolyspora*
	Species	**Actinopolyspora biskrensis**
	Full Scientific Name (LPSN)	Actinopolyspora biskrensis Saker et al. 2015

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %90.353

[Ref.: #69480]	Motility	no Confidence in %90

Multimedia content

[Ref.: #21461]

Caption:

Medium 1504 28°C

[Ref.: #21461]

Intellectual property rights:

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]

Ability of spore formation

yes Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21461]	Sample type/isolated from	Saharan soil
[Ref.: #21461]	Geographic location (country and/or sea, region)	northern Sahara, Biskra region
[Ref.: #21461]	Country	Algeria
[Ref.: #21461]	Country ISO 3 Code	DZA
[Ref.: #21461]	Continent	Africa
* marker position based on {}

Isolation sources categories

#Environmental	#Terrestrial	#Soil
#Environmental	#Terrestrial	#Desert
#Climate	#Hot	#Arid

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence KJ504178 (>99% sequence identity) for Actinopolyspora from Microbeatlas

Aquatic Samples	2
Soil Samples
Animal Samples	10
Plant Samples
Total Samples	12

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21461]	Actinopolyspora biskrensis strain H254 16S ribosomal RNA gene, partial sequence	KJ504178	1474	GenBank ENA	1470178 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Actinopolyspora biskrensis CECT 8576	GCA_013408175	scaffold	GenBank ENA	1470178 tax ID	*
[Ref.: #66792]	Actinopolyspora biskrensis strain CECT 8576	1470178.3	wgs	PATRIC	1470178 tax ID	*
[Ref.: #66792]	Actinopolyspora biskrensis CECT 8576	2824480100	draft	JGI IMG/M	1470178 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Actinopolyspora biskrensis CECT 8576 NCBI: GCA_013408175.1
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Actinopolyspora biskrensis CECT 8576 NCBI: GCA_013408175.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	90.353	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	95.236	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	88.35	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	85.874	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	90.238	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	90	no

Availability in culture collections External links

[Ref.: #21461]

Culture collection no.

DSM 46684, CECT 8576

[Ref.: #89293]

SI-ID 401581

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Actinopolyspora biskrensis sp. nov., a novel halophilic actinomycete isolated from Northern Sahara.	Saker R, Bouras N, Meklat A, Zitouni A, Schumann P, Sproer C, Klenk HP, Sabaou N	Curr Microbiol	10.1007/s00284-014-0740-3	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21461

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46684

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#89293

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID401581.1 )

* These data were automatically processed and therefore are not curated

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Actinopolyspora biskrensis CECT 8576

Actinopolyspora biskrensis CECT 8576

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