Name: Pseudomonas asturiensis DSM 100247
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130574

Type strain:

Species: Pseudomonas asturiensis

Culture col. no.: DSM 100247, CECT 8095, LMG 26898, LPPA 221

Strain history: <- LMG <- I. Cleenwerck, LMG <- A. J. González, Servicio Regional de Investigación y Desarrollo Agroalimentario SERIDA, Villaviciosa; LPPA 221

NCBI tax ID(s): 1190415 (species)

SI-ID 293307

LMG 26898, CECT 8095, DSM 100247

Section

Pseudomonas asturiensis DSM 100247 is a mesophilic plant pathogen that was isolated from soybean plant, dark reddish spots on leaves.

mesophilic
plant pathogen
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Pseudomonadaceae*
	Genus	*Pseudomonas*
	Species	**Pseudomonas asturiensis**
	Full Scientific Name (LPSN)	Pseudomonas asturiensis González et al. 2013

Information on culture and growth conditions Culture and growth conditions

[Ref.: #22024]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #22024]

Culture medium growth

[Ref.: #22024]

Culture medium link

Medium recipe at MediaDive

[Ref.: #22024]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #22024]			growth	28 °C

[Ref.: #22024]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #22024]	Sample type/isolated from	soybean (Glycine max) plant, dark reddish spots on leaves
[Ref.: #22024]	Host species	Glycine max
[Ref.: #22024]	Geographic location (country and/or sea, region)	Asturias, Villaviciosa
[Ref.: #22024]	Country	Spain
[Ref.: #22024]	Country ISO 3 Code	ESP
[Ref.: #22024]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host

#Plants

#Herbaceous plants (Grass,Crops)

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #22024]	Pathogenicity (plant)	yes
[Ref.: #22024]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Pseudomonas asturiensis LMG 26898	GCA_900143095	scaffold	GenBank	1190415 tax ID	*
[Ref.: #66792]	Pseudomonas asturiensis strain LMG 26898	1190415.4	wgs	PATRIC	1190415 tax ID	*
[Ref.: #66792]	Pseudomonas asturiensis sp. nov LMG 26898	2663762795	draft	JGI IMG/M	1190415 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Pseudomonas asturiensis LMG 26898 NCBI: GCA_900143095.1
[Ref.: #69480]	motile	yes	89.203	no
[Ref.: #69480]	flagellated	yes	79.454	no
[Ref.: #69480]	gram-positive	no	98.312	no
[Ref.: #69480]	anaerobic	no	98.259	no
[Ref.: #69480]	aerobic	yes	94.589	no
[Ref.: #69480]	halophile	no	92.86	no
[Ref.: #69480]	spore-forming	no	94.336	no
[Ref.: #69480]	thermophile	no	99.729	yes
[Ref.: #69480]	glucose-util	yes	96.179	no
[Ref.: #69480]	glucose-ferment	no	91.401	no

Availability in culture collections External links

[Ref.: #22024]

Culture collection no.

DSM 100247, CECT 8095, LMG 26898, LPPA 221

[Ref.: #89091]

SI-ID 293307

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Pseudomonas asturiensis sp. nov., isolated from soybean and weeds.	Gonzalez AJ, Cleenwerck I, De Vos P, Fernandez-Sanz AM	Syst Appl Microbiol	10.1016/j.syapm.2013.04.004	2013	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#22024

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 100247

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#89091

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID293307.1 )

* These data were automatically processed and therefore are not curated

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Pseudomonas asturiensis LMG 26898

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