Pseudoalteromonas atlantica (DSM 6840, CIP 59.31, LMG 2139)

Name: Pseudoalteromonas atlantica (DSM 6840, CIP 59.31, LMG 2139)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 13050

Type strain

Culture col. no. DSM 6840 CIP 59.31 LMG 2139 NCIB 8959 NCIMB 8959

NCBI tax ID(s) 288

Special Collections DSMZ CIP

Links

Pseudoalteromonas atlantica DSM 6840 is a psychrophilic, Gram-negative, motile prokaryote of the family Pseudoalteromonadaceae.

Gram-negative motile rod-shaped psychrophilic 16S sequence

Name and taxonomic classification

SI-ID 6668

LMG 2138,ATCC 19262,NCMB 301,NCTC 10685,LMG 2288,LMG 2139,NCIB 8959,LMG 2140,DSM 7451,DSM 7450,IAM 12927,CIP 104721,JCM 8845,NCIMB 301,DSM 6839,DSM 6840,IAM 12376,CIP 59.31,CIP 63.28,CECT 579,NCIMB 8959,CCUG 2345,NBRC 103033,CCUG 2345 A

@ref 20215

Last LPSN update 2025-12-16 09:50:00

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Alteromonadales

Family Pseudoalteromonadaceae

Genus Pseudoalteromonas

Species Pseudoalteromonas atlantica

Full scientific name Pseudoalteromonas atlantica (Akagawa-Matsushita et al. 1992) Gauthier et al. 1995

Synonyms (1)

Alteromonas atlantica

BacDive ID	Other strains from **Pseudoalteromonas atlantica** (9)	Type strain
174334	P. atlantica CIP 104721, ATCC 19262, IAM 12927, JCM 8845, ... (type strain)
135331	P. atlantica 512-M, CIP 103669, IAM 14161, JCM 8846
135332	P. atlantica 512-T, CIP 103670, IAM 14162, JCM 8847
135333	P. atlantica 512-W, CIP 103671, IAM 14163, JCM 8848
135334	P. atlantica 511-T, CIP 103672, IAM 14164, JCM 8849
135335	P. atlantica T9, CIP 103673, IAM 14165, JCM 8850
143012	P. atlantica CCUG 16155
156312	P. atlantica CCUG 61125
156314	P. atlantica CCUG 61127

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
116535	negative	rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
2849	BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)	Medium recipe at MediaDive	Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
33394	Marine agar (MA)		Distilled water make up to (1000.000 ml);Marine agar (55.100 g)
116535	CIP Medium 13	Medium recipe at CIP
116535	CIP Medium 186	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
2849	positive	growth	20	psychrophilic
33394	positive	growth	22	psychrophilic
116535	positive	growth	5-37
116535	negative	growth	41

Physiology and metabolism

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
116535	16947 ChEBI	citrate	-	carbon source
116535	4853 ChEBI	esculin	+	hydrolysis
116535	17632 ChEBI	nitrate	-	reduction
116535	16301 ChEBI	nitrite	-	reduction

Antibiotic resistance

@ref	Metabolite	Is antibiotic	Is sensitive	Is resistant
116535	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
116535	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
116535	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
116535	amylase	+
68382	beta-galactosidase	+	3.2.1.23	from API zym
116535	beta-galactosidase	+	3.2.1.23
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
116535	caseinase	+	3.4.21.50
116535	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
116535	DNase	+
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
116535	gelatinase	+
116535	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
116535	lipase	+
68382	lipase (C 14)	-		from API zym
116535	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
116535	ornithine decarboxylase	-	4.1.1.17
116535	oxidase	+
68382	trypsin	+	3.4.21.4	from API zym
116535	tween esterase	+
116535	urease	-	3.5.1.5
68382	valine arylamidase	+		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
116535	-	+	+	+	-	+	+	-	+	+	+	+	+	+	-	+	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
116535	not determinedn.d.	+	-	+	+	-	-	-	+	-	+	+	+	-	+	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	+	-	+	+	-	-	+	-

Isolation, sampling and environmental information

Taxonmaps

69479

Global distribution of 16S sequence KF019206 (>99% sequence identity) for Pseudoalteromonas from Microbeatlas

Aquatic Samples	2792
Soil Samples	24
Animal Samples	384
Plant Samples	22
Total Samples	3222

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
2849	1	Risk group (German classification) According to TRBA 466
116535	1	Risk group (French classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	Pseudoalteromonas atlantica 16S ribosomal RNA gene, partial sequence	KF019206	1353		288
2849	Pseudoalteromonas atlantica gene for 16S rRNA, partial sequence, strain: NBRC 103033	AB681913	1461		288

Genome-based predictions

Literature

References

#2849	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6840
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#33394	; Curators of the CIP;
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#116535	Collection of Institut Pasteur ; Curators of the CIP; CIP 59.31
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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