Name: Uruburuella testudinis 07_0D624
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 130469

Type strain:

Species: Uruburuella testudinis

Strain Designation: 07_0D624

Culture col. no.: DSM 26510, CCUG 63373

Strain history: <- P. Kuhnert, Univ. Berne, Inst. Vet. Bacteriol., Switzerland; 07_0D624

NCBI tax ID(s): 1282863 (species)

SI-ID 398079

DSM 26510, CCUG 63373

Section

Uruburuella testudinis 07_0D624 is an aerobe, mesophilic animal pathogen that was isolated from lungs of a tortoise .

aerobe
animal pathogen
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Neisseriales*
	Family	*Neisseriaceae*
	Genus	*Uruburuella*
	Species	**Uruburuella testudinis**
	Full Scientific Name (LPSN)	Uruburuella testudinis Kuhnert et al. 2015

Information on morphological and physiological properties Morphology

[Ref.: #21861]	Type of hemolysis	gamma
[Ref.: #21861]	Incubation period	1-2 days

[Ref.: #62975]	Incubation period	1 day

Information on culture and growth conditions Culture and growth conditions

[Ref.: #21861]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #21861]

Culture medium growth

[Ref.: #21861]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21861]

Culture medium composition

expand / minimize

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Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #21861]

Culture medium growth

[Ref.: #21861]

Culture medium link

Medium recipe at MediaDive

[Ref.: #21861]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #21861]			growth	37 °C
[Ref.: #62975]			growth	30-37 °C

[Ref.: #21861]	Temperature range	mesophilic
[Ref.: #62975]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #62975]

Oxygen tolerance

aerobe

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68369]	arginine ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	D-glucose ChEBI	+	fermentation	* from API 20NE
[Ref.: #68369]	D-mannitol ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	esculin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gelatin ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]	gluconate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	malate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]	nitrate ChEBI	+	reduction	* from API 20NE
[Ref.: #68369]	tryptophan ChEBI	-	energy source	* from API 20NE
[Ref.: #68369]	urea ChEBI	+	hydrolysis	* from API 20NE
	Only first 10 entries are displayed. Click here to see all.

	Metabolite production	Metabolite	Production
[Ref.: #68369]		indole ChEBI	no	* from API 20NE

	Physiological tests	Metabolite	Indole test
[Ref.: #68369]		indole ChEBI	-	* from API 20NE

	Enzyme	Enzyme activity	EC number
[Ref.: #68369]	arginine dihydrolase	-	3.5.3.6	* from API 20NE
[Ref.: #68369]	beta-glucosidase	-	3.2.1.21	* from API 20NE
[Ref.: #21861]	catalase	+	1.11.1.6
[Ref.: #68369]	cytochrome oxidase	+	1.9.3.1	* from API 20NE
[Ref.: #21861]	cytochrome-c oxidase	+	1.9.3.1
[Ref.: #68369]	gelatinase	-		* from API 20NE
[Ref.: #68369]	urease	+	3.5.1.5	* from API 20NE

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #21861]	24915	+	-	+	-	+	-	-	-	+	-	-	+	-	-	+	-	-	+	-	-	+
[Ref.: #21861]	24912	+	-	+	-	+	-	-	-	+	-	-	+	-	-	+	-	-	+	-	-	+
[Ref.: #21861]	23946	+	-	+	-	+	-	-	-	+	+	+	+	+/-	+/-	+	+/-	+/-	+	+/-	-	not determinedn.d.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #21861]	Sample type/isolated from	lungs of a tortoise (Testudo)
[Ref.: #21861]	Host species	Testudo
[Ref.: #21861]	Geographic location (country and/or sea, region)	Canton of Berne
[Ref.: #21861]	Country	Switzerland
[Ref.: #21861]	Country ISO 3 Code	CHE
[Ref.: #21861]	Continent	Europe
[Ref.: #21861]	Geographic location	46.9453°/7.4475°

[Ref.: #62975]	Sample type/isolated from	Turtle,lung
[Ref.: #62975]	Sampling date	2007-04-17
[Ref.: #62975]	Geographic location (country and/or sea, region)	Berne
[Ref.: #62975]	Country	Switzerland
[Ref.: #62975]	Country ISO 3 Code	CHE
[Ref.: #62975]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Reptilia	-
#Host Body-Site	#Oral cavity and airways	#Lung

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JX966318 (>99% sequence identity) for Uruburuella testudinis subclade from Microbeatlas

Aquatic Samples	991
Soil Samples	14
Animal Samples	254
Plant Samples	4
Total Samples	1263

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #21861]	Pathogenicity (animal)	yes
[Ref.: #21861]	Biosafety level	2	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #21861]	Uruburuella testudinis strain 07_OD624 16S ribosomal RNA (rrs) gene, partial sequence	JX966318	1363	ENA	1282863 tax ID

[Ref.: #21861]

GC-content

54.4 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #21861]

Culture collection no.

DSM 26510, CCUG 63373

[Ref.: #88998]

SI-ID 398079

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Uruburuella testudinis sp. nov., isolated from tortoise (Testudo).	Kuhnert P, Thomann A, Brodard I, Haefeli W, Korczak BM	Int J Syst Evol Microbiol	10.1099/ijs.0.000089	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#21861

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26510

#62975 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 63373

#68369

Automatically annotated from API 20NE .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#88998

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID398079.1 )

* These data were automatically processed and therefore are not curated

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