Desulfofundulus thermobenzoicus subsp. thermobenzoicus (DSM 6193, ATCC 49756, TSB)

Name: Desulfofundulus thermobenzoicus subsp. thermobenzoicus (DSM 6193, ATCC 49756, TSB)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 11805

Type strain

Strain Designation TSB

Culture col. no. DSM 6193 ATCC 49756 TSB

NCBI tax ID(s) 29376 196193

Special Collections DSMZ

History <- M. Tasaki and Y. Kamagata, Fermentation Research Institute, Tsukuba, Ibaraki, Japan; TSB <- M. Tasaki and Y. Kamagata {1989}

Links

Desulfofundulus thermobenzoicus subsp. thermobenzoicus TSB is an anaerobe bacterium that was isolated from sludge, thermophilic anaerobic reactor.

anaerobe 16S sequence Bacteria

Name and taxonomic classification

SI-ID 42665

ATCC 49756,DSM 6193

@ref 20215

Last LPSN update 2026-02-09 11:20:40

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Peptococcaceae

Genus Desulfofundulus

Species Desulfofundulus thermobenzoicus subsp. thermobenzoicus

Full scientific name Desulfofundulus thermobenzoicus subsp. thermobenzoicus (Tasaki et al. 1991) Watanabe et al. 2018

Synonyms (1)

Desulfotomaculum thermobenzoicum subsp. thermobenzoicum

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
2521	DESULFOVIBRIO (POSTGATE) MEDIUM (DSMZ Medium 63)		Medium recipe at MediaDive	Name: DESULFOVIBRIO (POSTGATE) MEDIUM (DSMZ Medium 63) Composition: MgSO4 x 7 H2O 2.0 g/l Na-DL-lactate 2.0 g/l NH4Cl 1.0 g/l Yeast extract 1.0 g/l Na2SO4 1.0 g/l FeSO4 x 7 H2O 0.5 g/l K2HPO4 0.5 g/l CaCl2 x 2 H2O 0.1 g/l Na-thioglycolate 0.1 g/l Ascorbic acid 0.1 g/l Sodium resazurin 0.0005 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
2521	positive	growth	60

Physiology and metabolism

Oxygen tolerance

2521

Oxygen toleranceanaerobe

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Biodegradation	#Anaerobic digestor
#Environmental	#Terrestrial	#Mud (Sludge)
#Condition	#Thermophilic (>45°C)	-

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
2521	sludge, thermophilic anaerobic reactor	Japan	JPN	Asia

Taxonmaps

69479

Global distribution of 16S sequence Y11574 (>99% sequence identity) for Desulfofundulus from Microbeatlas

Aquatic Samples	38
Soil Samples	16
Animal Samples	65
Plant Samples	1
Total Samples	120

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
2521	1	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20218	D.thermobenzoicum 16S rRNA gene	Y11574	1600		29376
2521	Desulfotomaculum thermobenzoicum 16S rRNA gene, strain DSM 6193, clone 1	AJ294429	1559		29376

GC content

2521

GC-content (mol%)52.8

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
	Draft Genome Sequence of Desulfofundulus thermobenzoicus subsp. thermosyntrophicus DSM 14055, a Moderately Thermophilic Sulfate Reducer.	Bertran E, Ward LM, Johnston DT.	Microbiol Resour Announc	10.1128/mra.01416-19	2020
Enzymology	Alcohol dehydrogenase system acts as the sole pathway for methanol oxidation in Desulfofundulus kuznetsovii strain TPOSR.	Friedeheim L, Boeren S, Sanchez-Andrea I, Stams AJM, Sousa DZ.	Antonie Van Leeuwenhoek	10.1007/s10482-024-01937-1	2024
Genetics	Effect of Sulfate on Carbon Monoxide Conversion by a Thermophilic Syngas-Fermenting Culture Dominated by a Desulfofundulus Species.	Alves JI, Visser M, Arantes AL, Nijsse B, Plugge CM, Alves MM, Stams AJM, Sousa DZ.	Front Microbiol	10.3389/fmicb.2020.588468	2020
	Syntrophic entanglements for propionate and acetate oxidation under thermophilic and high-ammonia conditions.	Singh A, Schnurer A, Dolfing J, Westerholm M.	ISME J	10.1038/s41396-023-01504-y	2023
	From an extremophilic community to an electroautotrophic production strain: identifying a novel Knallgas bacterium as cathodic biofilm biocatalyst.	Reiner JE, Geiger K, Hackbarth M, Fink M, Lapp CJ, Jung T, Dotsch A, Hugler M, Wagner M, Hille-Reichel A, Wilcke W, Kerzenmacher S, Horn H, Gescher J.	ISME J	10.1038/s41396-020-0595-5	2020

References

#2521	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6193
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Desulfofundulus thermobenzoicus subsp. thermobenzoicus (DSM 6193, ATCC 49756, TSB)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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