Paenibacillus barcinonensis (DSM 15478, CECT 7022, BP-23)

Name: Paenibacillus barcinonensis (DSM 15478, CECT 7022, BP-23)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 11585

Type strain

Strain Designation BP-23

Culture col. no. DSM 15478 CECT 7022 BP-23 CIP 108718

NCBI tax ID(s) 198119

Special Collections DSMZ Literature strains CIP

History <- M. Sánchez, Univ. Barcelona; BP23 CIP <- 2005, CECT <- strain BP-23

Links

Paenibacillus barcinonensis BP-23 is an anaerobe, spore-forming, mesophilic prokaryote of the family Paenibacillaceae.

spore-forming Gram-positive rod-shaped anaerobe mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 138020

CECT 7022,DSM 15478,CIP 108718,BCRC 17560,CCRC 17560

@ref 20215

Last LPSN update 2026-02-09 11:20:36

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Paenibacillaceae

Genus Paenibacillus

Species Paenibacillus barcinonensis

Full scientific name Paenibacillus barcinonensis Sánchez et al. 2005

Morphology

Cell morphology

@ref	Gram stain	Cell length	Cell width	Cell shape	Motility
31353	positive	3 µm	0.75 µm	rod-shaped
116733	positive			rod-shaped

Colony morphology

116733

Hemolysis ability1

Pigmentation

31353

Productionyes

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
5948	CASO AGAR (MERCK 105458) (DSMZ Medium 220)	Medium recipe at MediaDive	Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water
38299	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
116733	CIP Medium 72	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
5948	positive	growth	30	mesophilic
31353	positive	growth	10-40
31353	positive	optimum	25	mesophilic
38299	positive	growth	30	mesophilic
116733	positive	growth	10-45
116733	negative	growth	55

Culture pH

@ref	Ability	Type	PH	PH range
31353	positive	optimum	7.7
31353	positive	growth	5-10.4	alkaliphile
116733	positive	growth	6

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance
31353	anaerobe
116733	facultative anaerobe

Spore formation

@ref	Spore formation	Confidence
31353
116733
125439		92.9
125438		91.88

Halophily

@ref	Salt	Growth	Tested relation	Concentration
31353	NaCl	positive	growth	<5 %
31353	NaCl	positive	optimum	2.5 %
116733	NaCl	positive	growth	0-10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	+	builds acid from	from API 50CH acid
31353	22599 ChEBI	arabinose	+	carbon source
68371	18305 ChEBI	arbutin	+	builds acid from	from API 50CH acid
31353	17057 ChEBI	cellobiose	+	carbon source
68371	17057 ChEBI	cellobiose	+	builds acid from	from API 50CH acid
116733	16947 ChEBI	citrate	-	carbon source
68371	17108 ChEBI	D-arabinose	+	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	+	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	+	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	+	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
31353	4853 ChEBI	esculin	+	hydrolysis
116733	4853 ChEBI	esculin	+	hydrolysis
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
31353	28757 ChEBI	fructose	+	carbon source
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
31353	28260 ChEBI	galactose	+	carbon source
68371	28066 ChEBI	gentiobiose	+	builds acid from	from API 50CH acid
31353	24265 ChEBI	gluconate	+	carbon source
68371	24265 ChEBI	gluconate	+	builds acid from	from API 50CH acid
31353	17234 ChEBI	glucose	+	carbon source
31353	17754 ChEBI	glycerol	+	carbon source
68371	17754 ChEBI	glycerol	+	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	+	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	+	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	+	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
31353	17716 ChEBI	lactose	+	carbon source
68371	17716 ChEBI	lactose	+	builds acid from	from API 50CH acid
31353	17306 ChEBI	maltose	+	carbon source
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
31353	29864 ChEBI	mannitol	+	carbon source
31353	37684 ChEBI	mannose	+	carbon source
68371	6731 ChEBI	melezitose	+	builds acid from	from API 50CH acid
31353	28053 ChEBI	melibiose	+	carbon source
68371	28053 ChEBI	melibiose	+	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	+	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	+	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	+	builds acid from	from API 50CH acid
31353	506227 ChEBI	N-acetylglucosamine	+	carbon source
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
116733	17632 ChEBI	nitrate	-	reduction
116733	17632 ChEBI	nitrate	+	respiration
116733	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	+	builds acid from	from API 50CH acid
31353	16634 ChEBI	raffinose	+	carbon source
68371	16634 ChEBI	raffinose	+	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
31353	33942 ChEBI	ribose	+	carbon source
31353	17814 ChEBI	salicin	+	carbon source
68371	17814 ChEBI	salicin	+	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
31353	17992 ChEBI	sucrose	+	carbon source
68371	17992 ChEBI	sucrose	+	builds acid from	from API 50CH acid
31353	27082 ChEBI	trehalose	+	carbon source
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	+	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid
31353	18222 ChEBI	xylose	+	carbon source

Metabolite production

@ref	Chebi-ID	Metabolite	Production
116733	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
116733	15688 ChEBI	acetoin	-
116733	17234 ChEBI	glucose		+

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
116733	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	+	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	+	3.2.1.22	from API zym
68382	alpha-glucosidase	+	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
116733	amylase	-
68382	beta-galactosidase	+	3.2.1.23	from API zym
116733	beta-galactosidase	+	3.2.1.23
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
116733	caseinase	+	3.4.21.50
31353	catalase	+	1.11.1.6
116733	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
116733	DNase	+
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
116733	gamma-glutamyltransferase	-	2.3.2.2
116733	gelatinase	+
116733	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
116733	lipase	-
68382	lipase (C 14)	-		from API zym
116733	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
116733	ornithine decarboxylase	-	4.1.1.17
116733	oxidase	+
116733	protease	+
68382	trypsin	+	3.4.21.4	from API zym
116733	tween esterase	+
116733	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
116733	-	+	+	+	-	+	-	-	+	+	+	+	+	+	-	+	+	-	-	-

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
116733	not determinedn.d.	+	-	+	+	+	+	-	-	+	+	+	+	+	-	+	-	+	+	-	+/-	+	+	+	+	+	+	+	+	+	+	+	+	-	+	+	-	-	-	+	+	-	-	-	+	-	-	+	-	+

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
116733	not determinedn.d.	+	+	+	-	+	-	+	+	+	+	+	+	+	+	+	+	+	+	-	+	+	+	+	-	-	+	-	-	-	-	-	+	-	+	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
5948			Spain	ESP	Europe
116733	Environment, Soil, rice field	Isbro delta	Spain	ESP	Europe

Taxonmaps

69479

Global distribution of 16S sequence AJ716019 (>99% sequence identity) for Paenibacillus from Microbeatlas

Aquatic Samples	28
Soil Samples	116
Animal Samples	92
Plant Samples	294
Total Samples	530

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
5948	1	Risk group (German classification) According to TRBA 466
116733	1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM321749v1 assembly for Paenibacillus barcinonensis CECT 7022	scaffold	GCA_003217495	198119.4	2770939580	198119	62.18

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
31353	Paenibacillus barcinonensis 16S rRNA gene, type strain BP-23T	AJ716019	1523		198119

GC content

31353

GC-content (mol%)45

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Paenibacillus barcinonensis CECT 7022
NCBI: GCA_003217495

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	92.90	no
125439	motility	BacteriaNetⓘ	yes	87.90	no
125439	gram_stain	BacteriaNetⓘ	variable	83.50	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	85.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Paenibacillus barcinonensis CECT 7022
NCBI: GCA_003217495.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	67.79	yes
125438	anaerobic	anaerobicⓘ	no	90.25	no
125438	aerobic	aerobicⓘ	no	57.55	yes
125438	spore-forming	spore-formingⓘ	yes	91.88	no
125438	thermophilic	thermophileⓘ	no	94.20	yes
125438	flagellated	motile2+ⓘ	yes	85.97	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Bacillus sp. JR3 esterase LipJ: A new mesophilic enzyme showing traces of a thermophilic past.	Ribera J, Estupinan M, Fuentes A, Fillat A, Martinez J, Diaz P.	PLoS One	10.1371/journal.pone.0181029	2017
Metabolism	Structural analysis of the reducing-end xylose-releasing exo-oligoxylanase Rex8A from Paenibacillus barcinonensis BP-23 deciphers its molecular specificity.	Jimenez-Ortega E, Valenzuela S, Ramirez-Escudero M, Pastor FJ, Sanz-Aparicio J	FEBS J	10.1111/febs.15332	2020
Metabolism	The Glycoside Hydrolase Family 8 Reducing-End Xylose-Releasing Exo-oligoxylanase Rex8A from Paenibacillus barcinonensis BP-23 Is Active on Branched Xylooligosaccharides.	Valenzuela SV, Lopez S, Biely P, Sanz-Aparicio J, Pastor FI	Appl Environ Microbiol	10.1128/AEM.01329-16	2016
Metabolism	New GH16 beta-glucanase from Paenibacillus barcinonensis BP-23 releases a complex pattern of mixed-linkage oligomers from barley glucan.	Cerda LA, Valenzuela SV, Diaz P, Pastor FI	Biotechnol Appl Biochem	10.1002/bab.1348	2015
Metabolism	Unusual carboxylesterase bearing a GGG(A)X-type oxyanion hole discovered in Paenibacillus barcinonensis BP-23.	Infanzon B, Valenzuela SV, Fillat A, Pastor FI, Diaz P	Biochimie	10.1016/j.biochi.2014.06.003	2014
Enzymology	Xyn11E from Paenibacillus barcinonensis BP-23: a LppX-chaperone-dependent xylanase with potential for upgrading paper pulps.	Valenzuela SV, Diaz P, Pastor FI	Appl Microbiol Biotechnol	10.1007/s00253-014-5565-2	2014
Phylogeny	Paenibacillus polysaccharolyticus sp. nov., a xylanolytic and cellulolytic bacteria isolated from leaves of Bamboo Phyllostachys aureosulcata.	Madhaiyan M, Poonguzhali S, Saravanan VS, Duraipandiyan V, Al-Dhabi NA, Kwon SW, Whitman WB	Int J Syst Evol Microbiol	10.1099/ijsem.0.001901	2017
Phylogeny	Paenibacillus silvae sp. nov., isolated from a tropical rainforest soil.	Huang H, Zhang F, Liu M, Cui Y, Sun Q, Zhu J, Zou X, Bao S	Int J Syst Evol Microbiol	10.1099/ijsem.0.001608	2017
Phylogeny	Paenibacillus puernese sp. nov., a beta-glucosidase-producing bacterium isolated from Pu'er tea.	Wang DD, Kim YJ, Hoang VA, Nguyen NL, Singh P, Wang C, Chun-Yang D	Arch Microbiol	10.1007/s00203-015-1180-6	2015
Phylogeny	Paenibacillus oceanisediminis sp. nov. isolated from marine sediment.	Lee J, Shin NR, Jung MJ, Roh SW, Kim MS, Lee JS, Lee KC, Kim YO, Bae JW	Int J Syst Evol Microbiol	10.1099/ijs.0.037085-0	2012
Phylogeny	Paenibacillus provencensis sp. nov., isolated from human cerebrospinal fluid, and Paenibacillus urinalis sp. nov., isolated from human urine.	Roux V, Fenner L, Raoult D	Int J Syst Evol Microbiol	10.1099/ijs.0.65228-0	2008
Phylogeny	Paenibacillus barcinonensis sp. nov., a xylanase-producing bacterium isolated from a rice field in the Ebro River delta.	Sanchez MM, Fritze D, Blanco A, Sproer C, Tindall BJ, Schumann P, Kroppenstedt RM, Diaz P, Pastor FIJ	Int J Syst Evol Microbiol	10.1099/ijs.0.63383-0	2005

References

#5948	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 15478
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#27666	IJSEM 935 2005 ( DOI 10.1099/ijs.0.63383-0 , PubMed 15774688 )
#31353	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #27666
#38299	; Curators of the CIP;
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#116733	Collection of Institut Pasteur ; Curators of the CIP; CIP 108718
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Paenibacillus barcinonensis (DSM 15478, CECT 7022, BP-23)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Pigmentation

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API zym

API 50CHac

API biotype100

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_003217495

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media