Name: Cohnella phaseoli GSPC1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 11447

Type strain:

Species: Cohnella phaseoli

Strain Designation: GSPC1

Culture col. no.: DSM 19269, LMG 24086

Strain history: <- E. Velazquez; GSPC1

NCBI tax ID(s): 456490 (species)

SI-ID 302805

LMG 24086, DSM 19269, CECT 7287

Section

Cohnella phaseoli GSPC1 is an aerobe, spore-forming, mesophilic bacterium that was isolated from root nodules of Phaseolus coccineus.

Gram-positive
motile
rod-shaped
spore-forming
aerobe
mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Paenibacillaceae*
	Genus	*Cohnella*
	Species	**Cohnella phaseoli**
	Full Scientific Name (LPSN)	Cohnella phaseoli García-Fraile et al. 2008

Information on morphological and physiological properties Morphology

[Ref.: #32418]	Gram stain	positive

[Ref.: #32418]	Cell length	2.5 µm

[Ref.: #32418]	Cell width	0.7 µm

[Ref.: #32418]	Cell shape	rod-shaped

[Ref.: #32418]	Motility	yes

[Ref.: #32418]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #7988]

Culture medium

CASO AGAR (MERCK 105458) (DSMZ Medium 220)

[Ref.: #7988]

Culture medium growth

[Ref.: #7988]

Culture medium link

Medium recipe at MediaDive

[Ref.: #7988]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #7988]	growth	30 °C
[Ref.: #32418]	growth	10-45 °C
[Ref.: #32418]	optimum	28 °C

[Ref.: #7988]	Temperature range	mesophilic
[Ref.: #32418]	Temperature range	mesophilic

	pH	Kind of pH		pH
[Ref.: #32418]			optimum	7
[Ref.: #32418]			growth	06-08

Information on physiology and metabolism Physiology and metabolism

[Ref.: #32418]

Oxygen tolerance

aerobe

[Ref.: #32418]

Ability of spore formation

yes

[Ref.: #32418]

Observation

aggregates in chains

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #32418]	arabinose ChEBI	+	carbon source
[Ref.: #32418]	esculin ChEBI	+	hydrolysis
[Ref.: #32418]	gluconate ChEBI	+	carbon source
[Ref.: #32418]	glucose ChEBI	+	carbon source
[Ref.: #32418]	malate ChEBI	+	carbon source
[Ref.: #32418]	maltose ChEBI	+	carbon source
[Ref.: #32418]	mannose ChEBI	+	carbon source
[Ref.: #32418]	N-acetylglucosamine ChEBI	+	carbon source

	Enzyme	Enzyme activity	EC number
[Ref.: #32418]	catalase	+	1.11.1.6
[Ref.: #32418]	cytochrome oxidase	+	1.9.3.1
[Ref.: #32418]	gelatinase	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #7988]	Sample type/isolated from	root nodules of Phaseolus coccineus
[Ref.: #7988]	Host species	Phaseolus coccineus
[Ref.: #7988]	Geographic location (country and/or sea, region)	Segovia
[Ref.: #7988]	Country	Spain
[Ref.: #7988]	Country ISO 3 Code	ESP
[Ref.: #7988]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Root nodule

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence EU014872 (>99% sequence identity) for Cohnella phaseoli subclade from Microbeatlas

Aquatic Samples	30
Soil Samples	71
Animal Samples	49
Plant Samples	15
Total Samples	165

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #7988]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #7988]	Cohnella phaseoli strain GSPC1 16S ribosomal RNA gene, partial sequence	EU014872	1548	ENA	456490 tax ID

[Ref.: #7988]

GC-content

60.3 mol%

Availability in culture collections External links

[Ref.: #7988]

Culture collection no.

DSM 19269, LMG 24086

[Ref.: #80685]

SI-ID 302805

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Cohnella cellulosilytica sp. nov., isolated from buffalo faeces.	Khianngam S, Tanasupawat S, Akaracharanya A, Kim KK, Lee KC, Lee JS	Int J Syst Evol Microbiol	10.1099/ijs.0.032607-0	2011	*
Phylogeny	Cohnella luojiensis sp. nov., isolated from soil of a Euphrates poplar forest.	Cai F, Wang Y, Qi H, Dai J, Yu B, An H, Rahman E, Fang C	Int J Syst Evol Microbiol	10.1099/ijs.0.016790-0	2009	*
Phylogeny	Cohnella yongneupensis sp. nov. and Cohnella ginsengisoli sp. nov., isolated from two different soils.	Kim SJ, Weon HY, Kim YS, Anandham R, Jeon YA, Hong SB, Kwon SW	Int J Syst Evol Microbiol	10.1099/ijs.0.013581-0	2009	*
Phylogeny	Cohnella phaseoli sp. nov., isolated from root nodules of Phaseolus coccineus in Spain, and emended description of the genus Cohnella.	Garcia-Fraile P, Velazquez E, Mateos PF, Martinez-Molina E, Rivas R	Int J Syst Evol Microbiol	10.1099/ijs.0.65468-0	2008	*

References

#7988

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 19269

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#32418

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28641 (see below)

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#80685

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID302805.1 )

#28641

IJSEM 1855 2008 ( DOI 10.1099/ijs.0.65468-0 , PubMed 18676468 )

* These data were automatically processed and therefore are not curated

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