Name: Oceanospirillum maris 101
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 11289

Type strain:

Species: Oceanospirillum maris

Strain Designation: 101

Culture col. no.: DSM 6286, ATCC 27509, NCIMB 2226, CIP 103445, LMG 5213, VPI 35

Strain history: CIP <- 1990, NCIMB <- ATCC <- N.R. Krieg: strain VPI 35 <- H. Jannasch: strain 101

NCBI tax ID(s): 1122617 (strain), 64977 (species)

SI-ID 344000

LMG 5213, ATCC 27509, NCMB 2226, CIP 103445, DSM 6286, NCIMB 2226

Other strains from Oceanospirillum maris

O. maris OF2, DSM 9524, IFO 13616, LMG 5305, ...

Section

Oceanospirillum maris 101 is a mesophilic, motile bacterium that was isolated from seawater.

motile
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Oceanospirillales*
	Family	*Oceanospirillaceae*
	Genus	*Oceanospirillum*
	Species	**Oceanospirillum maris**
	Full Scientific Name (LPSN)	Oceanospirillum maris Hylemon et al. 1973 (Approved Lists 1980)

	Synonym	Oceanospirillum hiroshimense
	Synonym	Oceanospirillum maris subsp. williamsae
	Synonym	Oceanospirillum maris subsp. hiroshimense
	Synonym	"Spirillum* hiroshimense"*

Information on morphological and physiological properties Morphology

[Ref.: #120828]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %99.998

[Ref.: #120828]	Cell shape	rod-shaped

[Ref.: #120828]	Motility	yes
[Ref.: #69480]	Motility	yes Confidence in %96.56

Information on culture and growth conditions Culture and growth conditions

[Ref.: #2572]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #2572]

Culture medium growth

[Ref.: #2572]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2572]

Culture medium composition

expand / minimize

[Ref.: #38131]

Culture medium

MEDIUM 60 - for Oceanospirillum maris subsp. maris

[Ref.: #38131]

Culture medium growth

[Ref.: #38131]

Culture medium composition

expand / minimize

[Ref.: #120828]

Culture medium

CIP Medium 60

[Ref.: #120828]

Culture medium growth

[Ref.: #120828]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #2572]		growth	30 °C
[Ref.: #38131]		growth	30 °C
[Ref.: #120828]		growth	15-30 °C
[Ref.: #120828]	no	growth	5 °C
[Ref.: #120828]	no	growth	37 °C
[Ref.: #120828]	no	growth	41 °C

[Ref.: #2572]	Temperature range	mesophilic
[Ref.: #38131]	Temperature range	mesophilic
[Ref.: #120828]	Temperature range	psychrophilic
[Ref.: #120828]	Temperature range	mesophilic
[Ref.: #120828]	Temperature range	thermophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	no Confidence in %100
[Ref.: #69480]	Ability of spore formation	no Confidence in %99.994

	Salt	Tested relation		Salt conc.
[Ref.: #120828]	NaCl	no	growth	0	%
[Ref.: #120828]	NaCl	no	growth	2	%
[Ref.: #120828]	NaCl	no	growth	4	%
[Ref.: #120828]	NaCl	no	growth	6	%
[Ref.: #120828]	NaCl	no	growth	8	%
[Ref.: #120828]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #120828]	citrate ChEBI	-	carbon source
[Ref.: #120828]	esculin ChEBI	-	hydrolysis
[Ref.: #120828]	glucose ChEBI	-	degradation
[Ref.: #120828]	nitrate ChEBI	-	reduction
[Ref.: #120828]	nitrite ChEBI	-	reduction

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #120828]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	no	yes

	Metabolite production	Metabolite	Production
[Ref.: #120828]		indole ChEBI	no

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #120828]		acetoin ChEBI	-
[Ref.: #120828]		glucose ChEBI		-

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #120828]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	-	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #120828]	amylase	-
[Ref.: #120828]	beta-galactosidase	-	3.2.1.23
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #120828]	caseinase	-	3.4.21.50
[Ref.: #120828]	catalase	-	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #120828]	gamma-glutamyltransferase	-	2.3.2.2
[Ref.: #120828]	gelatinase	-
[Ref.: #120828]	lecithinase	-
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #120828]	lipase	-
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #120828]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #120828]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #120828]	oxidase	+
[Ref.: #120828]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #120828]	protease	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #120828]	tryptophan deaminase	-
[Ref.: #120828]	tween esterase	+
[Ref.: #120828]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #120828]	7540	-	-	+	+	-	+	-	-	-	-	-	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #2572]	Sample type/isolated from	seawater

[Ref.: #120828]	Sample type/isolated from	Animal, Seawater
* marker position based on {}

Isolation sources categories

#Environmental

#Aquatic

#Marine

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB006771 (>99% sequence identity) for Oceanospirillum maris subclade from Microbeatlas

Aquatic Samples	393
Soil Samples	12
Animal Samples	29
Plant Samples	1
Total Samples	435

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #2572]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #120828]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Oceanospirillum maris subsp. maris gene for 16S rRNA, partial sequence, strain: ATCC 27509	AB006771	1465	ENA	64978 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Oceanospirillum maris DSM 6286	GCA_000422865	scaffold	GenBank	1122617 tax ID	*
[Ref.: #66792]	Oceanospirillum maris DSM 6286	1122617.3	wgs	PATRIC	1122617 tax ID	*
[Ref.: #66792]	Oceanospirillum maris DSM 6286	2523231066	draft	JGI IMG/M	1122617 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Oceanospirillum maris DSM 6286 DSM 6286 NCBI: GCA_000422865.1
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Oceanospirillum maris DSM 6286 DSM 6286 NCBI: GCA_000422865.1
[Ref.: #69480]	motile	yes	94.823	no
[Ref.: #69480]	flagellated	yes	88.762	no
[Ref.: #69480]	gram-positive	no	98.947	no
[Ref.: #69480]	anaerobic	no	94.622	no
[Ref.: #69480]	aerobic	yes	84.267	no
[Ref.: #69480]	halophile	yes	79.027	no
[Ref.: #69480]	spore-forming	no	94.348	no
[Ref.: #69480]	thermophile	no	97.272	yes
[Ref.: #69480]	glucose-util	yes	52.209	no
[Ref.: #69480]	glucose-ferment	no	85.731	no

Availability in culture collections External links

[Ref.: #2572]

Culture collection no.

DSM 6286, ATCC 27509, NCIMB 2226, CIP 103445, LMG 5213, VPI 35

[Ref.: #80522]

SI-ID 344000

References

#2572

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6286

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#38131 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#80522

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID344000.1 )

#120828 Collection of Institut Pasteur ; Curators of the CIP; CIP 103445
* These data were automatically processed and therefore are not curated

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Oceanospirillum maris DSM 6286 DSM 6286

Oceanospirillum maris DSM 6286 DSM 6286

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