Strain identifier
BacDive ID: 8137
Type strain: 
Species: Acinetobacter marinus
Strain Designation: SW-3
Strain history: CIP <- 2013, DSMZ <- JH Yoon, KRIBB, Daejon, Korea: strain SW-3
NCBI tax ID(s): 281375 (species)
version 8.1 (current version)
General
@ref: 6358
BacDive-ID: 8137
DSM-Number: 16312
keywords: 16S sequence, Bacteria, aerobe, mesophilic, Gram-negative, oval-shaped
description: Acinetobacter marinus SW-3 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from sea water.
NCBI tax id
- NCBI tax id: 281375
- Matching level: species
strain history
| @ref | history |
|---|---|
| 6358 | <- J.-H. Yoon; SW-3 |
| 36425 | 2013, KCTC |
| 115956 | CIP <- 2013, DSMZ <- JH Yoon, KRIBB, Daejon, Korea: strain SW-3 |
doi: 10.13145/bacdive8137.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Moraxellaceae
- genus: Acinetobacter
- species: Acinetobacter marinus
- full scientific name: Acinetobacter marinus Yoon et al. 2007
@ref: 6358
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Moraxellaceae
genus: Acinetobacter
species: Acinetobacter marinus
full scientific name: Acinetobacter marinus Yoon et al. 2007
strain designation: SW-3
type strain: yes
Morphology
cell morphology
- @ref: 115956
- gram stain: negative
- cell shape: oval-shaped
- motility: no
colony morphology
- @ref: 6358
- incubation period: 1-2 days
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 6358 | CASO AGAR (MERCK 105458) (DSMZ Medium 220) | yes | https://mediadive.dsmz.de/medium/220 | Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water |
| 33590 | MEDIUM 72- for trypto casein soja agar | yes | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |
| 36425 | MEDIUM 72- for trypto casein soja agar | yes | Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g) | |
| 115956 | CIP Medium 72 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72 |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 6358 | positive | growth | 30 | mesophilic |
| 33590 | positive | growth | 30 | mesophilic |
| 36425 | positive | growth | 30 | mesophilic |
| 60984 | positive | growth | 30 | mesophilic |
Physiology and metabolism
oxygen tolerance
- @ref: 60984
- oxygen tolerance: aerobe
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent | isolation date |
|---|---|---|---|---|---|---|
| 6358 | sea water | Yellow Sea, Wando-gun | Republic of Korea | KOR | Asia | |
| 60984 | Sea water | Yellow Sea | Republic of Korea | KOR | Asia | |
| 115956 | Environment, Sea water | Yellow sea | Republic of Korea | KOR | Asia | 2007 |
isolation source categories
- Cat1: #Environmental
- Cat2: #Aquatic
- Cat3: #Marine
Safety information
risk assessment
- @ref: 115956
- biosafety level: 1
- biosafety level comment: Risk group (French classification)
Sequence information
16S sequences
- @ref: 6358
- description: Acinetobacter marinus strain SW-3 16S ribosomal RNA, partial sequence
- accession: NR_115298
- length: 1493
- database: nuccore
- NCBI tax ID: 281375
GC content
- @ref: 6358
- GC-content: 44.1
- method: high performance liquid chromatography (HPLC)
External links
@ref: 6358
culture collection no.: DSM 16312, CIP 110634, KCTC 12259, CCUG 56484
literature
- topic: Phylogeny
- Pubmed-ID: 18092456
- title: Acinetobacter marinus sp. nov. and Acinetobacter seohaensis sp. nov., isolated from sea water of the Yellow Sea in Korea.
- authors: Yoon JH, Kim IG, Oh TK
- journal: J Microbiol Biotechnol
- year: 2007
- mesh: Acinetobacter/classification/genetics/*isolation & purification, Nucleic Acid Hybridization, Phenotype, Phylogeny, RNA, Ribosomal, 16S, Seawater/*microbiology
- topic2: Phenotype
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 6358 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 16312) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-16312 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 33590 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/30438 | ||||
| 36425 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/30391 | ||||
| 60984 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 56484) | https://www.ccug.se/strain?id=56484 | |||
| 66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg | 10.1093/nar/gkaa1025 | BRENDA, the ELIXIR core data resource in 2021: new developments and updates | Nucleic Acids Res. 49: D498-D508 2020 | 33211880 | |
| 115956 | Curators of the CIP | Collection of Institut Pasteur (CIP 110634) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20110634 |