Strain identifier

BacDive ID: 7245

Type strain: Yes

Species: Methylovorus mays

Strain Designation: BV, C, KUK

Strain history: <- Y. A. Trotsenko, Inst. Biochem. Physiol. Microorg., RAS, Pushchino, Russia; KUK <- N. V. Doronina

NCBI tax ID(s): 184077 (species)

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General

@ref: 6143

BacDive-ID: 7245

DSM-Number: 16018

keywords: 16S sequence, Bacteria, mesophilic

description: Methylovorus mays BV is a mesophilic bacterium that was isolated from phyllosphere of Zea mays L..

NCBI tax id

  • NCBI tax id: 184077
  • Matching level: species

strain history

  • @ref: 6143
  • history: <- Y. A. Trotsenko, Inst. Biochem. Physiol. Microorg., RAS, Pushchino, Russia; KUK <- N. V. Doronina

doi: 10.13145/bacdive7245.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Nitrosomonadales
  • family: Methylophilaceae
  • genus: Methylovorus
  • species: Methylovorus mays
  • full scientific name: Methylovorus mays Doronina et al. 2001

@ref: 6143

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Methylophilales

family: Methylophilaceae

genus: Methylovorus

species: Methylovorus mays

full scientific name: Methylovorus mays Doronina et al. 2001 emend. Doronina et al. 2005

strain designation: BV, C, KUK

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 6143
  • name: MEDIUM K (DSMZ Medium 1122)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/1122
  • composition: Name: MEDIUM K (DSMZ Medium 1122) Composition: Agar 20.0 g/l KH2PO4 2.0 g/l (NH4)2SO4 2.0 g/l NaCl 0.5 g/l MgSO4 x 7 H2O 0.125 g/l FeSO4 x 7 H2O 0.002 g/l Methanol Distilled water

culture temp

  • @ref: 6143
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 6143
  • sample type: phyllosphere of Zea mays L.
  • host species: Zea mays
  • geographic location: Moscow region
  • country: Russia
  • origin.country: RUS
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Host#Plants#Herbaceous plants (Grass,Crops)
#Host Body-Site#Plant#Leaf (Phyllosphere)

taxonmaps

  • @ref: 69479
  • File name: preview.99_1822.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_174;96_1029;97_1202;98_1441;99_1822&stattab=map
  • Last taxonomy: Methylovorus
  • 16S sequence: AY486132
  • Sequence Identity:
  • Total samples: 9863
  • soil counts: 3399
  • aquatic counts: 3002
  • animal counts: 792
  • plant counts: 2670

Safety information

risk assessment

  • @ref: 6143
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 6143
  • description: Methylovorus mays strain C 16S ribosomal RNA gene, partial sequence
  • accession: AY486132
  • length: 1440
  • database: ena
  • NCBI tax ID: 184077

GC content

  • @ref: 6143
  • GC-content: 57.2
  • method: thermal denaturation, midpoint method (Tm)

External links

@ref: 6143

culture collection no.: DSM 16018, NCIMB 13992, VKM B-2221

straininfo link

  • @ref: 76697
  • straininfo: 100772

literature

  • topic: Cultivation
  • Pubmed-ID: 11195573
  • title: [Facultative and obligate aerobic methylobacteria synthesize cytokinins].
  • authors: Ivanova EG, Doronina NV, Shepeliakovskaia AO, Laman AG, Brovko FA, Trotsenko IuA
  • journal: Mikrobiologiia
  • year: 2000
  • mesh: Base Sequence, Culture Media, Cytokinins/*biosynthesis, DNA Primers, Methylobacterium/genetics/*metabolism, Polymerase Chain Reaction, RNA, Bacterial/genetics, RNA, Messenger/genetics
  • topic2: Metabolism

Reference

@idauthorscataloguedoi/urltitle
6143Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 16018)https://www.dsmz.de/collection/catalogue/details/culture/DSM-16018
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
76697Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID100772.1StrainInfo: A central database for resolving microbial strain identifiers