Strain identifier
BacDive ID: 7096
Type strain: 
Species: Methanosarcina mazei
Strain Designation: S-6
Culture col. no.: DSM 2053, ATCC 43572, OCM 26
General
@ref: 690
BacDive-ID: 7096
DSM-Number: 2053
keywords: anaerobe, Archaea, 16S sequence, mesophilic
description: Methanosarcina mazei S-6 is an anaerobe, mesophilic archaeon that was isolated from sewage sludge plant.
strain history: <- R. A. Mah, University of California, Los Angeles, USA; S-6
doi: 10.13145/bacdive7096.20201210.5
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/archaea
- keyword: phylum/euryarchaeota
- domain: Archaea
- phylum: Euryarchaeota
- class: Methanomicrobia
- order: Methanosarcinales
- family: Methanosarcinaceae
- genus: Methanosarcina
- species: Methanosarcina mazei
- full scientific name: Methanosarcina mazei corrig. (Barker 1936) Mah and Kuhn 1984
synonyms
@ref synonym 20215 Methanosarcina frisia 20215 Methanococcus frisius 20215 Methanosarcina mazeii 20215 Methanococcus mazei
@ref: 690
domain: Archaea
phylum: Euryarchaeota
class: Methanomicrobia
order: Methanosarcinales
family: Methanosarcinaceae
genus: Methanosarcina
species: Methanosarcina mazei
full scientific name: Methanosarcina mazei (Barker 1936) Mah and Kuhn 1984
strain designation: S-6
type strain: yes
Morphology
multimedia
- @ref: 690
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_2053.jpg
- caption: Medium 120, 37°C
- license or copyright: (C) Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
- @ref: 690
- name: METHANOSARCINA MEDIUM (DSMZ Medium 120), anaerobic
- growth: yes
- link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium120.pdf
culture temp
- @ref: 690
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 690
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 690
- sample type: sewage sludge plant
- geographic location: California, El Segundo
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Industrial | #Plant (Factory) |
| #Engineered | #Waste | #Sewage sludge |
Safety information
risk assessment
- @ref: 690
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Enterococcus faecalis clone OCM026 16S ribosomal RNA gene, partial sequence | GU417218 | 456 | ena | 1351 |
| 690 | Methanosarcina mazei 16S rRNA gene, strain DSM 2053 (T) | AJ012095 | 1333 | ena | 2209 |
External links
@ref: 690
culture collection no.: DSM 2053, ATCC 43572, OCM 26
straininfo link
| @ref | passport |
|---|---|
| 20218 | http://www.straininfo.net/strains/157707 |
| 20218 | http://www.straininfo.net/strains/157708 |
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 690 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 2053) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-2053 | |||
| 20215 | D.Gleim, M.Kracht, N.Weiss et. al. | http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.html | Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 |