Strain identifier

BacDive ID: 6989

Type strain: Yes

Species: Methanococcus maripaludis

Strain Designation: JJ

Culture col. no.: DSM 2067, ATCC 43000, JCM 10722

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 701

BacDive-ID: 6989

DSM-Number: 2067

keywords: anaerobe, Archaea, 16S sequence, genome sequence, mesophilic

description: Methanococcus maripaludis JJ is an anaerobe, mesophilic archaeon that was isolated from marine marsh sediment.

strain history: <- W. J. Jones, University of Illinois, Urbana, USA; JJ <- W. J. Jones {1974}

doi: 10.13145/bacdive6989.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/archaea
  • keyword: phylum/euryarchaeota
  • domain: Archaea
  • phylum: Euryarchaeota
  • class: Methanococci
  • order: Methanococcales
  • family: Methanococcaceae
  • genus: Methanococcus
  • species: Methanococcus maripaludis
  • full scientific name: Methanococcus maripaludis Jones et al. 1984
  • synonyms

    • @ref: 20215
    • synonym: Methanococcus deltae

@ref: 701

domain: Archaea

phylum: Euryarchaeota

class: Methanococci

order: Methanococcales

family: Methanococcaceae

genus: Methanococcus

species: Methanococcus maripaludis

full scientific name: Methanococcus maripaludis Jones et al. 1984

strain designation: JJ

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 701
  • name: METHANOGENIUM MEDIUM (H2/CO2) (DSMZ Medium 141), anaerobic
  • growth: yes
  • link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium141.pdf

culture temp

  • @ref: 701
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 701
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

  • @ref: 701
  • sample type: marine marsh sediment
  • geographic location: South Carolina, Pawley's island
  • country: USA
  • origin.country: USA
  • continent: North America

isolation source categories

Cat1Cat2Cat3
#Environmental#Aquatic#Marine
#Environmental#Aquatic#Sediment

Safety information

risk assessment

  • @ref: 701
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Methanococcus maripaludis strain JJ 16S ribosomal RNA gene, partial sequenceJQ3467531262ena39152
701Methanococcus maripaludis 16S ribosomal RNA, complete sequenceU384841413ena39152

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Methanococcus maripaludis DSM 2067GCA_002945325completencbi39152
66792Methanococcus maripaludis strain DSM 206739152.8completepatric39152

GC content

  • @ref: 701
  • GC-content: 33
  • method: sequence analysis

External links

@ref: 701

culture collection no.: DSM 2067, ATCC 43000, JCM 10722

straininfo link

@refpassport
20218http://www.straininfo.net/strains/111983
20218http://www.straininfo.net/strains/111982
20218http://www.straininfo.net/strains/157729

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
701Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 2067)https://www.dsmz.de/collection/catalogue/details/culture/DSM-2067
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)